Gene/Protein Characteristic Table for KIAA0383
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Product ID ORK00523
Accession No AB002381
Description K(lysine) acetyltransferase 6B, transcript variant 3
Clone name hh00708s1
Vector information
The cDNA fragment was originally inserted at SalI-NotI site ...
cDNA sequence DNA sequence (6592 bp)
Predicted protein sequence (1781 aa)
Flexi ORF Clone FXC00523
Source Human adult brain
Rouge ID mKIAA0383 by Kazusa Mouse cDNA Project
Note We replaced hh00708, former representative clones for KIAA0383 with hh00708s1. (2002/5/10)
Features of the cloned cDNA sequence
Description

Length: 6592 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 1246 bp
Genome contig ID gi89161187f_76172622
PolyA signal sequence
(AATAAA,-24)
+----*----+----*----+----*----+----
TTTTAACATAAAATAAATTATGATGAGCCATTTTT
Flanking genome sequence
(289436 - 289485)
----+----*----+----*----+----*----+----*----+----*
AGCCTCTTGTGTCCTGTCATATTATGATTGATAGAGAATGACCAATGGAA

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 10 f 76272622 76462056 16 100.0 Perfect prediction
Features of the protein sequence
Description

Length: 1781 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
EAW54558 0 99.9 MYST histone ac...
Homo sapiens
Q8WML3 0 98.2 Histone acetylt...
Macaca fascicularis
AAF00100 0 85.9 histone acetylt...
Homo sapiens
AAI50619 0 85.8 MYST histone ac...
Homo sapiens
Q8WYB5 0 85.9 Histone acetylt...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001965 215 272 PF00628 Zinc finger
IPR001965 274 320 PF00628 Zinc finger
IPR002717 481 668 PF01853 MOZ/SAS-like protein
HMMSmart IPR005818 93 170 SM00526 Histone H1/H5
IPR001965 215 270 SM00249 Zinc finger
IPR001965 271 318 SM00249 Zinc finger
ProfileScan IPR001965 213 272 PS50016 Zinc finger
IPR001965 269 320 PS50016 Zinc finger
ScanRegExp IPR001965 237 317 PS01359 Zinc finger
Expression profile
Description

RT-PCR
Experimental conditions
Primer_f GATTACGCCTCTCCTGCTTGG
Primer_r GTGTCTGTTTATATTGCTTCC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 10
Experimental conditions
Panel name GeneBridge 4
Primer_f GATTACGCCTCTCCTGCTTGG
Primer_r GTGTCTGTTTATATTGCTTCC
PCR product length 83 bp
PCR conditions 95 °C15 sec64 °C60 sec32 cycles
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