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Gene/Protein Characteristic Table for KIAA0296

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Product ID	ORK07504
Accession No	AB002294
Description	zinc finger protein 646
Clone name	hf00260
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (7604 bp) Predicted protein sequence (1838 aa)
Flexi ORF Clone	FXC07504
Source	Human adult brain
Rouge ID	mKIAA0296 by Kazusa Mouse cDNA Project

Length: 7604 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1838 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR007087	17	40	PF00096	Zinc finger
	IPR007087	57	79	PF00096	Zinc finger
	IPR007087	84	106	PF00096	Zinc finger
	IPR007087	248	270	PF00096	Zinc finger
	IPR007087	275	297	PF00096	Zinc finger
	IPR007087	303	325	PF00096	Zinc finger
	IPR007087	383	405	PF00096	Zinc finger
	IPR007087	410	432	PF00096	Zinc finger
	IPR007087	474	496	PF00096	Zinc finger
	IPR007087	501	523	PF00096	Zinc finger
	IPR007087	584	606	PF00096	Zinc finger
	IPR007087	626	648	PF00096	Zinc finger
	IPR007087	857	879	PF00096	Zinc finger
	IPR007087	1061	1083	PF00096	Zinc finger
	IPR007087	1088	1110	PF00096	Zinc finger
	IPR007087	1212	1234	PF00096	Zinc finger
	IPR007087	1239	1261	PF00096	Zinc finger
	IPR007087	1267	1289	PF00096	Zinc finger
	IPR007087	1308	1330	PF00096	Zinc finger
	IPR007087	1335	1357	PF00096	Zinc finger
	IPR007087	1373	1395	PF00096	Zinc finger
	IPR007087	1594	1616	PF00096	Zinc finger
	IPR007087	1686	1708	PF00096	Zinc finger
	IPR007087	1713	1735	PF00096	Zinc finger
	IPR007087	1741	1763	PF00096	Zinc finger
	IPR007087	1770	1792	PF00096	Zinc finger
HMMSmart	IPR015880	17	40	SM00355	Zinc finger
	IPR015880	57	79	SM00355	Zinc finger
	IPR015880	84	106	SM00355	Zinc finger
	IPR015880	248	270	SM00355	Zinc finger
	IPR015880	275	297	SM00355	Zinc finger
	IPR015880	303	325	SM00355	Zinc finger
	IPR015880	383	405	SM00355	Zinc finger
	IPR015880	410	432	SM00355	Zinc finger
	IPR015880	474	496	SM00355	Zinc finger
	IPR015880	501	523	SM00355	Zinc finger
	IPR015880	584	606	SM00355	Zinc finger
	IPR015880	626	648	SM00355	Zinc finger
	IPR015880	653	675	SM00355	Zinc finger
	IPR015880	830	852	SM00355	Zinc finger
	IPR015880	857	879	SM00355	Zinc finger
	IPR015880	890	913	SM00355	Zinc finger
	IPR015880	967	987	SM00355	Zinc finger
	IPR015880	1061	1083	SM00355	Zinc finger
	IPR015880	1088	1110	SM00355	Zinc finger
	IPR015880	1212	1234	SM00355	Zinc finger
	IPR015880	1239	1261	SM00355	Zinc finger
	IPR015880	1267	1289	SM00355	Zinc finger
	IPR015880	1308	1330	SM00355	Zinc finger
	IPR015880	1335	1357	SM00355	Zinc finger
	IPR015880	1373	1395	SM00355	Zinc finger
	IPR015880	1540	1560	SM00355	Zinc finger
	IPR015880	1566	1588	SM00355	Zinc finger
	IPR015880	1594	1616	SM00355	Zinc finger
	IPR015880	1686	1708	SM00355	Zinc finger
	IPR015880	1713	1735	SM00355	Zinc finger
	IPR015880	1741	1763	SM00355	Zinc finger
	IPR015880	1770	1792	SM00355	Zinc finger
ProfileScan	IPR007087	17	45	PS50157	Zinc finger
	IPR007087	57	79	PS50157	Zinc finger
	IPR007087	84	111	PS50157	Zinc finger
	IPR007087	248	271	PS50157	Zinc finger
	IPR007087	275	302	PS50157	Zinc finger
	IPR007087	303	330	PS50157	Zinc finger
	IPR007087	383	411	PS50157	Zinc finger
	IPR007087	410	437	PS50157	Zinc finger
	IPR007087	474	496	PS50157	Zinc finger
	IPR007087	501	523	PS50157	Zinc finger
	IPR007087	584	611	PS50157	Zinc finger
	IPR007087	626	648	PS50157	Zinc finger
	IPR007087	653	680	PS50157	Zinc finger
	IPR007087	830	852	PS50157	Zinc finger
	IPR007087	857	884	PS50157	Zinc finger
	IPR007087	890	918	PS50157	Zinc finger
	IPR007087	1061	1083	PS50157	Zinc finger
	IPR007087	1088	1115	PS50157	Zinc finger
	IPR007087	1212	1234	PS50157	Zinc finger
	IPR007087	1239	1266	PS50157	Zinc finger
	IPR007087	1267	1294	PS50157	Zinc finger
	IPR007087	1308	1330	PS50157	Zinc finger
	IPR007087	1335	1362	PS50157	Zinc finger
	IPR007087	1373	1400	PS50157	Zinc finger
	IPR007087	1594	1621	PS50157	Zinc finger
	IPR007087	1686	1709	PS50157	Zinc finger
	IPR007087	1713	1740	PS50157	Zinc finger
	IPR007087	1741	1768	PS50157	Zinc finger
	IPR007087	1770	1797	PS50157	Zinc finger
ScanRegExp	IPR007087	19	40	PS00028	Zinc finger
	IPR007087	59	79	PS00028	Zinc finger
	IPR007087	86	106	PS00028	Zinc finger
	IPR007087	250	270	PS00028	Zinc finger
	IPR007087	277	297	PS00028	Zinc finger
	IPR007087	305	325	PS00028	Zinc finger
	IPR007087	385	405	PS00028	Zinc finger
	IPR007087	412	433	PS00028	Zinc finger
	IPR007087	476	496	PS00028	Zinc finger
	IPR007087	503	523	PS00028	Zinc finger
	IPR007087	586	606	PS00028	Zinc finger
	IPR007087	628	648	PS00028	Zinc finger
	IPR007087	655	675	PS00028	Zinc finger
	IPR007087	832	852	PS00028	Zinc finger
	IPR007087	859	879	PS00028	Zinc finger
	IPR007087	892	913	PS00028	Zinc finger
	IPR007087	1063	1083	PS00028	Zinc finger
	IPR007087	1090	1110	PS00028	Zinc finger
	IPR007087	1214	1234	PS00028	Zinc finger
	IPR007087	1241	1261	PS00028	Zinc finger
	IPR007087	1269	1289	PS00028	Zinc finger
	IPR007087	1310	1330	PS00028	Zinc finger
	IPR007087	1337	1357	PS00028	Zinc finger
	IPR007087	1375	1395	PS00028	Zinc finger
	IPR007087	1568	1588	PS00028	Zinc finger
	IPR007087	1596	1616	PS00028	Zinc finger
	IPR007087	1688	1708	PS00028	Zinc finger
	IPR007087	1715	1735	PS00028	Zinc finger
	IPR007087	1742	1763	PS00028	Zinc finger
	IPR007087	1772	1792	PS00028	Zinc finger

RT-PCR

Experimental conditions

Chromosome No. 16
Experimental conditions

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