Gene/Protein Characteristic Table for KIAA0275
Order Kazusa clone(s) from : Japan || Other countries
Product ID ORK00488
Accession No D87465
Description sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2, transcript variant 2
Clone name ha06214
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5316 bp)
Predicted protein sequence (510 aa)
Flexi ORF Clone FXC00488
Source Human adult brain
Rouge ID mKIAA0275 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 5316 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 3725 bp
Genome contig ID gi89161187r_73388799
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 10 r 73488799 73518778 11 99.0 Terminal No-hit
Features of the protein sequence

Length: 510 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q92563 8.3e-180 100.0 Testican-2; SPA...
Homo sapiens
XP_001136277 2.6e-179 99.8 sparc/osteonect...
Pan troglodytes
BAF85017 4.1e-179 99.8 unnamed protein...
Homo sapiens
AAQ89280 9.6e-179 99.8 SPOCK2 [Homo sa...
Homo sapiens
EAW54442 9.7e-178 99.3 sparc/osteonect...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR011497 221 266 PF07648 Protease inhibitor
IPR000716 399 462 PF00086 Thyroglobulin type-1
HMMSmart IPR002350 221 266 SM00280 Proteinase inhibitor I1
IPR000716 420 466 SM00211 Thyroglobulin type-1
ProfileScan IPR000716 396 462 PS51162 Thyroglobulin type-1
ScanRegExp IPR000716 419 448 PS00484 Thyroglobulin type-1
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 10
Experimental conditions
Panel name Genebridge 4
PCR product length 135 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
Order Kazusa clone(s) from : Japan || Other countries
Back to the HUGE Protein Database homepage
Send a message to office AT