hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22143281/chunk_1/iprscan-20080501-22143281.nocrc
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Query sequence: KIAA0275
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00211                                                  83.9    1.9e-20   1
SM00280                                                  55.4    7.3e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00280    1/1     221   266 ..     1    58 []    55.4  7.3e-12
SM00211    1/1     420   466 ..     1    58 []    83.9  1.9e-20

Alignments of top-scoring domains:
SM00280: domain 1 of 1, from 221 to 266: score 55.4, E = 7.3e-12
                   *->dCseyrsptsggllaCpre.ydPVCGsDGvTYsNeCeLcaaaCeaeq
                       C+            C++ +++ VCGsDG+TYs+ C L+++aC   +
    KIAA0275   221    ICK-----------PCHMAqLASVCGSDGHTYSSVCKLEQQACL--S 254  

                   gksievkhdGpC<-*
                    k++ v+++GpC   
    KIAA0275   255 SKQLAVRCEGPC    266  

SM00211: domain 1 of 1, from 420 to 466: score 83.9, E = 1.9e-20
                   *->iPqCdedGnYepvQCdgssggkRGqCWCVDpasGreipGtRtepGia
                      iP CdedG+Y+++QCd+ss    G CWCVD   G e+ GtRt     
    KIAA0275   420    IPSCDEDGYYRKMQCDQSS----GDCWCVD-QLGLELTGTRT----- 456  

                   pggdpdCpspc<-*
                    +g+pdC++++   
    KIAA0275   457 -HGSPDCDDIV    466  

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