Gene/Protein Characteristic Table for KIAA0258
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Product ID ORK00481
Accession No D87447
Description RGP1 homolog, RAB6A GEF complex partner 1
Clone name ha07053
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (6313 bp)
Predicted protein sequence (410 aa)
Flexi ORF Clone FXC00481
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0258 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 6313 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 5052 bp
Genome contig ID gi89161216f_35639340
PolyA signal sequence
Flanking genome sequence
(108584 - 108633)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 9 f 35739340 35747922 9 99.2 Perfect prediction
Features of the protein sequence

Length: 410 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
NP_001073965 2.3e-172 100.0 RGP1 retrograde...
Homo sapiens
XP_001084588 2.1e-171 99.8 hypothetical pr...
Macaca mulatta
XP_001497777 6.8e-164 97.7 RGP1 retrograde...
Equus caballus
BAF82255 7.5e-164 99.7 unnamed protein...
Homo sapiens
XP_001928680 2.1e-162 98.7 RGP1 retrograde...
Sus scrofa
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR014848 59 351 PF08737 Rgp1
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 9
Experimental conditions
Panel name Genebridge 4
PCR product length 136 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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