# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha07053.fasta.nr -Q ../query/KIAA0258.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0258, 410 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826823 sequences Expectation_n fit: rho(ln(x))= 5.3888+/-0.000185; mu= 9.6773+/- 0.010 mean_var=71.7177+/-13.908, 0's: 38 Z-trim: 39 B-trim: 66 in 1/67 Lambda= 0.151447 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|122937426|ref|NP_001073965.1| RGP1 retrograde g ( 431) 2753 610.5 2.3e-172 gi|109111048|ref|XP_001084588.1| PREDICTED: hypoth ( 496) 2739 607.5 2.1e-171 gi|194225470|ref|XP_001497777.2| PREDICTED: RGP1 r ( 423) 2624 582.3 6.8e-164 gi|158260155|dbj|BAF82255.1| unnamed protein produ ( 391) 2623 582.1 7.5e-164 gi|194034030|ref|XP_001928680.1| PREDICTED: RGP1 r ( 391) 2601 577.3 2.1e-162 gi|148670513|gb|EDL02460.1| RIKEN cDNA 1110029E03, ( 414) 2584 573.6 2.9e-161 gi|122136953|sp|Q2T9P3.1|RGP1_BOVIN Retrograde Gol ( 394) 2453 544.9 1.1e-152 gi|126334756|ref|XP_001367906.1| PREDICTED: hypoth ( 391) 2445 543.2 3.8e-152 gi|149565674|ref|XP_001518701.1| PREDICTED: hypoth ( 597) 2363 525.4 1.3e-146 gi|74206640|dbj|BAE41575.1| unnamed protein produc ( 363) 2335 519.1 6.2e-145 gi|149045758|gb|EDL98758.1| similar to hypothetica ( 401) 2068 460.8 2.4e-127 gi|148670512|gb|EDL02459.1| RIKEN cDNA 1110029E03, ( 403) 2068 460.8 2.4e-127 gi|56788832|gb|AAH88518.1| Hypothetical LOC496821 ( 387) 1768 395.3 1.3e-107 gi|49118745|gb|AAH72873.1| MGC80288 protein [Xenop ( 387) 1748 390.9 2.6e-106 gi|49902786|gb|AAH75984.1| RGP1 retrograde golgi t ( 386) 1714 383.5 4.5e-104 gi|115625716|ref|XP_001184203.1| PREDICTED: hypoth ( 432) 1175 265.7 1.4e-68 gi|89269545|emb|CAJ83073.1| novel protein [Xenopus ( 359) 1168 264.2 3.5e-68 gi|156210487|gb|EDO31658.1| predicted protein [Nem ( 391) 1050 238.4 2.2e-60 gi|193676195|ref|XP_001952273.1| PREDICTED: simila ( 391) 1020 231.8 2e-58 gi|91087061|ref|XP_974794.1| PREDICTED: similar to ( 387) 956 217.9 3.3e-54 gi|215505643|gb|EEC15137.1| conserved hypothetical ( 381) 913 208.5 2.2e-51 gi|210103107|gb|EEA51147.1| hypothetical protein B ( 385) 895 204.5 3.3e-50 gi|47212589|emb|CAG12814.1| unnamed protein produc ( 337) 865 197.9 2.8e-48 gi|167877092|gb|EDS40475.1| conserved hypothetical ( 396) 864 197.8 3.7e-48 gi|198435630|ref|XP_002127763.1| PREDICTED: simila ( 386) 822 188.6 2.1e-45 gi|156543838|ref|XP_001606678.1| PREDICTED: simila ( 379) 780 179.4 1.2e-42 gi|212515077|gb|EEB17277.1| conserved hypothetical ( 386) 740 170.7 5.2e-40 gi|210103110|gb|EEA51150.1| hypothetical protein B ( 791) 660 153.4 1.7e-34 gi|108879904|gb|EAT44129.1| conserved hypothetical ( 406) 646 150.1 8.3e-34 gi|193895925|gb|EDV94791.1| GH17709 [Drosophila gr ( 422) 646 150.1 8.6e-34 gi|194143290|gb|EDW59693.1| GJ10143 [Drosophila vi ( 432) 645 149.9 1e-33 gi|54639151|gb|EAL28553.1| GA10805 [Drosophila pse ( 434) 632 147.1 7.3e-33 gi|194112295|gb|EDW34338.1| GL21632 [Drosophila pe ( 435) 630 146.7 9.9e-33 gi|193917009|gb|EDW15876.1| GI22539 [Drosophila mo ( 428) 618 144.0 6e-32 gi|30177277|gb|EAA44830.1| AGAP003042-PA [Anophele ( 429) 616 143.6 8.2e-32 gi|194169863|gb|EDW84764.1| GK12960 [Drosophila wi ( 433) 616 143.6 8.2e-32 gi|190628812|gb|EDV44336.1| GF18927 [Drosophila an ( 439) 608 141.9 2.8e-31 gi|194182121|gb|EDW95732.1| GE25453 [Drosophila ya ( 441) 597 139.5 1.5e-30 gi|23170418|gb|AAF52065.2| CG1116, isoform A [Dros ( 442) 587 137.3 6.8e-30 gi|190650593|gb|EDV47848.1| GG12649 [Drosophila er ( 441) 584 136.6 1.1e-29 gi|194133394|gb|EDW54910.1| GM10792 [Drosophila se ( 442) 576 134.9 3.6e-29 gi|190586435|gb|EDV26488.1| hypothetical protein T ( 300) 573 134.1 4.1e-29 gi|23170420|gb|AAN13262.1| CG1116, isoform B [Dros ( 360) 505 119.3 1.4e-24 gi|194198105|gb|EDX11681.1| GD19766 [Drosophila si ( 360) 504 119.1 1.6e-24 gi|115917948|ref|XP_001188953.1| PREDICTED: hypoth ( 156) 483 114.3 2e-23 gi|115958880|ref|XP_001181646.1| PREDICTED: hypoth ( 148) 429 102.5 6.8e-20 gi|187031276|emb|CAP29337.1| Hypothetical protein ( 329) 332 81.5 3.1e-13 gi|154147328|emb|CAE17898.2| C. elegans protein M0 ( 366) 274 68.8 2.2e-09 gi|154703151|gb|EDO02890.1| hypothetical protein S ( 772) 246 62.9 2.9e-07 gi|4731918|gb|AAD28551.1|AF111944_1 development pr ( 249) 226 58.2 2.3e-06 >>gi|122937426|ref|NP_001073965.1| RGP1 retrograde golgi (431 aa) initn: 2753 init1: 2753 opt: 2753 Z-score: 3250.8 bits: 610.5 E(): 2.3e-172 Smith-Waterman score: 2753; 100.000% identity (100.000% similar) in 410 aa overlap (1-410:22-431) 10 20 30 KIAA02 GLGVPIPSVDYARSDSGAAMIEVVAELSRGPVFLAGEAL ::::::::::::::::::::::::::::::::::::::: gi|122 MTRALSGLACRALPAGRDSAEGLGVPIPSVDYARSDSGAAMIEVVAELSRGPVFLAGEAL 10 20 30 40 50 60 40 50 60 70 80 90 KIAA02 ECVVTVTNPLPPTATSASSEALAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 ECVVTVTNPLPPTATSASSEALAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVF 70 80 90 100 110 120 100 110 120 130 140 150 KIAA02 LPHRGERGQCILSTPPKILFCDLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 LPHRGERGQCILSTPPKILFCDLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTI 130 140 150 160 170 180 160 170 180 190 200 210 KIAA02 GCQRVNSPITLLRVPLRVLVLTGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 GCQRVNSPITLLRVPLRVLVLTGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGE 190 200 210 220 230 240 220 230 240 250 260 270 KIAA02 RLMAATSCRSLHLYNISDGRGKVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 RLMAATSCRSLHLYNISDGRGKVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQ 250 260 270 280 290 300 280 290 300 310 320 330 KIAA02 TEERVQPEYQRRRGAGGVPSVSHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 TEERVQPEYQRRRGAGGVPSVSHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSL 310 320 330 340 350 360 340 350 360 370 380 390 KIAA02 KWRLHFEFVTSREPGLVLLPPVEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 KWRLHFEFVTSREPGLVLLPPVEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYA 370 380 390 400 410 420 400 410 KIAA02 APGPSTSTITI ::::::::::: gi|122 APGPSTSTITI 430 >>gi|109111048|ref|XP_001084588.1| PREDICTED: hypothetic (496 aa) initn: 2739 init1: 2739 opt: 2739 Z-score: 3233.4 bits: 607.5 E(): 2.1e-171 Smith-Waterman score: 2739; 99.756% identity (99.756% similar) in 410 aa overlap (1-410:87-496) 10 20 30 KIAA02 GLGVPIPSVDYARSDSGAAMIEVVAELSRG :::: ::::::::::::::::::::::::: gi|109 PAGRLRGSARAQVPARGKVTLGAGTTRALSGLGVLIPSVDYARSDSGAAMIEVVAELSRG 60 70 80 90 100 110 40 50 60 70 80 90 KIAA02 PVFLAGEALECVVTVTNPLPPTATSASSEALAWASAQIHCQFHASESRVALPPPDSSQPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PVFLAGEALECVVTVTNPLPPTATSASSEALAWASAQIHCQFHASESRVALPPPDSSQPD 120 130 140 150 160 170 100 110 120 130 140 150 KIAA02 VQPDSQTVFLPHRGERGQCILSTPPKILFCDLRLDPGESKSYSYSEVLPIEGPPSFRGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VQPDSQTVFLPHRGERGQCILSTPPKILFCDLRLDPGESKSYSYSEVLPIEGPPSFRGQS 180 190 200 210 220 230 160 170 180 190 200 210 KIAA02 VKYVYKLTIGCQRVNSPITLLRVPLRVLVLTGLQDVRFPQDEAVAPSSPFLEEDEGGKKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VKYVYKLTIGCQRVNSPITLLRVPLRVLVLTGLQDVRFPQDEAVAPSSPFLEEDEGGKKD 240 250 260 270 280 290 220 230 240 250 260 270 KIAA02 SWLAELAGERLMAATSCRSLHLYNISDGRGKVGTFGIFKSVYRLGEDVVGTLNLGEGTVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SWLAELAGERLMAATSCRSLHLYNISDGRGKVGTFGIFKSVYRLGEDVVGTLNLGEGTVA 300 310 320 330 340 350 280 290 300 310 320 330 KIAA02 CLQFSVSLQTEERVQPEYQRRRGAGGVPSVSHVTHARHQESCLHTTRTSFSLPIPLSSTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CLQFSVSLQTEERVQPEYQRRRGAGGVPSVSHVTHARHQESCLHTTRTSFSLPIPLSSTP 360 370 380 390 400 410 340 350 360 370 380 390 KIAA02 GFCTAIVSLKWRLHFEFVTSREPGLVLLPPVEQPEPTTWTGPEQVPVDTFSWDLPIKVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GFCTAIVSLKWRLHFEFVTSREPGLVLLPPVEQPEPTTWTGPEQVPVDTFSWDLPIKVLP 420 430 440 450 460 470 400 410 KIAA02 TSPTLASYAAPGPSTSTITI :::::::::::::::::::: gi|109 TSPTLASYAAPGPSTSTITI 480 490 >>gi|194225470|ref|XP_001497777.2| PREDICTED: RGP1 retro (423 aa) initn: 2624 init1: 2624 opt: 2624 Z-score: 3098.6 bits: 582.3 E(): 6.8e-164 Smith-Waterman score: 2624; 97.739% identity (99.749% similar) in 398 aa overlap (13-410:26-423) 10 20 30 40 KIAA02 GLGVPIPSVDYARSDSGAAMIEVVAELSRGPVFLAGEALECVVTVTN ::.: :::::::::::::::::::::::::::::: gi|194 MVPGLEPAGTKYLASQVLMRATVVVRSESRAAMIEVVAELSRGPVFLAGEALECVVTVTN 10 20 30 40 50 60 50 60 70 80 90 100 KIAA02 PLPPTATSASSEALAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERG ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|194 PLPPTATSASSEALAWASAQIHCQFHASESRVALPPPDSSQPDVQPESQTVFLPHRGERG 70 80 90 100 110 120 110 120 130 140 150 160 KIAA02 QCILSTPPKILFCDLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QCILSTPPKILFCDLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSP 130 140 150 160 170 180 170 180 190 200 210 220 KIAA02 ITLLRVPLRVLVLTGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSC :::::::::::::::.::.::::::::::::::::::::::::::::::::::::::::: gi|194 ITLLRVPLRVLVLTGFQDTRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSC 190 200 210 220 230 240 230 240 250 260 270 280 KIAA02 RSLHLYNISDGRGKVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPE ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|194 RSLHLYNISDGRGKIGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPE 250 260 270 280 290 300 290 300 310 320 330 340 KIAA02 YQRRRGAGGVPSVSHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEF :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YQRRRGAGGAPSVSHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEF 310 320 330 340 350 360 350 360 370 380 390 400 KIAA02 VTSREPGLVLLPPVEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTST :::::::::::::.:::::.:::::::::::::::::::::::::::::::::::::::: gi|194 VTSREPGLVLLPPMEQPEPVTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTST 370 380 390 400 410 420 410 KIAA02 ITI ::: gi|194 ITI >>gi|158260155|dbj|BAF82255.1| unnamed protein product [ (391 aa) initn: 2623 init1: 2623 opt: 2623 Z-score: 3097.9 bits: 582.1 E(): 7.5e-164 Smith-Waterman score: 2623; 99.744% identity (100.000% similar) in 391 aa overlap (20-410:1-391) 10 20 30 40 50 60 KIAA02 GLGVPIPSVDYARSDSGAAMIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEA ::::::::::::::::::::::::::::::::::::::::: gi|158 MIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEA 10 20 30 40 70 80 90 100 110 120 KIAA02 LAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPKILFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPKILFC 50 60 70 80 90 100 130 140 150 160 170 180 KIAA02 DLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVL 110 120 130 140 150 160 190 200 210 220 230 240 KIAA02 TGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSCRSLHLYNISDGRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 TGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSCRSLHLYNISDGRG 170 180 190 200 210 220 250 260 270 280 290 300 KIAA02 KVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGAGGVPSV ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|158 KVGTFGIFKSVYRLGEDVVGTLNLGEGTAACLQFSVSLQTEERVQPEYQRRRGAGGVPSV 230 240 250 260 270 280 310 320 330 340 350 360 KIAA02 SHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFVTSREPGLVLLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFVTSREPGLVLLPP 290 300 310 320 330 340 370 380 390 400 410 KIAA02 VEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTSTITI :::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 VEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTSTITI 350 360 370 380 390 >>gi|194034030|ref|XP_001928680.1| PREDICTED: RGP1 retro (391 aa) initn: 2601 init1: 2601 opt: 2601 Z-score: 3071.9 bits: 577.3 E(): 2.1e-162 Smith-Waterman score: 2601; 98.721% identity (100.000% similar) in 391 aa overlap (20-410:1-391) 10 20 30 40 50 60 KIAA02 GLGVPIPSVDYARSDSGAAMIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEA ::::::::::::::::::::::::::::::::::::::::: gi|194 MIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEA 10 20 30 40 70 80 90 100 110 120 KIAA02 LAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPKILFC :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|194 LAWASAQIHCQFHASESRVALPPPDSSQPDVQPESQTVFLPHRGERGQCILSTPPKILFC 50 60 70 80 90 100 130 140 150 160 170 180 KIAA02 DLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVL 110 120 130 140 150 160 190 200 210 220 230 240 KIAA02 TGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSCRSLHLYNISDGRG ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TGLQDVQFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSCRSLHLYNISDGRG 170 180 190 200 210 220 250 260 270 280 290 300 KIAA02 KVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGAGGVPSV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|194 KVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGAGGAPSV 230 240 250 260 270 280 310 320 330 340 350 360 KIAA02 SHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFVTSREPGLVLLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFVTSREPGLVLLPP 290 300 310 320 330 340 370 380 390 400 410 KIAA02 VEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTSTITI .:::::.::::::::::::::::::::::::::::::::::::::::::: gi|194 TEQPEPVTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTSTITI 350 360 370 380 390 >>gi|148670513|gb|EDL02460.1| RIKEN cDNA 1110029E03, iso (414 aa) initn: 2584 init1: 2584 opt: 2584 Z-score: 3051.5 bits: 573.6 E(): 2.9e-161 Smith-Waterman score: 2584; 96.482% identity (98.744% similar) in 398 aa overlap (13-410:17-414) 10 20 30 40 50 KIAA02 GLGVPIPSVDYARSDSGAAMIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSA : ::::::::::::::::::::::::::::::::::::::::: gi|148 DSADATELRAGLAGAGRFGSGAAMIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSA 10 20 30 40 50 60 60 70 80 90 100 110 KIAA02 SSEALAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSEALAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPK 70 80 90 100 110 120 120 130 140 150 160 170 KIAA02 ILFCDLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLR ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|148 ILFCDLRLDPGESKSYSYSEVLPTEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLR 130 140 150 160 170 180 180 190 200 210 220 230 KIAA02 VLVLTGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSCRSLHLYNIS ::::::::::.:::::::::::::::::..:::::::::::::::::::::::::::::: gi|148 VLVLTGLQDVHFPQDEAVAPSSPFLEEDDSGKKDSWLAELAGERLMAATSCRSLHLYNIS 190 200 210 220 230 240 240 250 260 270 280 290 KIAA02 DGRGKVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|148 DGRGKVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGTGV 250 260 270 280 290 300 300 310 320 330 340 350 KIAA02 VPSVSHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFVTSREPGLV .::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|148 APSVSHVTHARHQESCLHTTRTSFSLPIPLCSTPGFCTAIVSLKWRLHFEFVTSREPGLV 310 320 330 340 350 360 360 370 380 390 400 410 KIAA02 LLPPVEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTSTITI ::::.:::::.::::::::::::::::::::::::::::.::::::::::.::: gi|148 LLPPLEQPEPATWTGPEQVPVDTFSWDLPIKVLPTSPTLVSYAAPGPSTSSITI 370 380 390 400 410 >>gi|122136953|sp|Q2T9P3.1|RGP1_BOVIN Retrograde Golgi t (394 aa) initn: 2453 init1: 2453 opt: 2453 Z-score: 2897.1 bits: 544.9 E(): 1.1e-152 Smith-Waterman score: 2453; 97.826% identity (100.000% similar) in 368 aa overlap (20-387:1-368) 10 20 30 40 50 60 KIAA02 GLGVPIPSVDYARSDSGAAMIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEA ::::::::::::::::::::::::::::::::::::::::: gi|122 MIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEA 10 20 30 40 70 80 90 100 110 120 KIAA02 LAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPKILFC :::::::::::::::::::::::::::::::::.::::.::::::::::::::::::::: gi|122 LAWASAQIHCQFHASESRVALPPPDSSQPDVQPESQTVLLPHRGERGQCILSTPPKILFC 50 60 70 80 90 100 130 140 150 160 170 180 KIAA02 DLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVL :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|122 DLRLDPGESKSYSYSEVLPVEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVL 110 120 130 140 150 160 190 200 210 220 230 240 KIAA02 TGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSCRSLHLYNISDGRG :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|122 TGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLTELAGERLMAATSCRSLHLYNISDGRG 170 180 190 200 210 220 250 260 270 280 290 300 KIAA02 KVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGAGGVPSV :::::::::::::::::::::::::::::::::.::::::::::::::::::::::.::: gi|122 KVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQYSVSLQTEERVQPEYQRRRGAGGAPSV 230 240 250 260 270 280 310 320 330 340 350 360 KIAA02 SHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFVTSREPGLVLLPP ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 SHITHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFVTSREPGLVLLPP 290 300 310 320 330 340 370 380 390 400 410 KIAA02 VEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTSTITI ::::::.:::::::::::::::::::: gi|122 VEQPEPATWTGPEQVPVDTFSWDLPIKPEASHTFLSVQPASYCYSVRSHIRAI 350 360 370 380 390 >>gi|126334756|ref|XP_001367906.1| PREDICTED: hypothetic (391 aa) initn: 2445 init1: 2445 opt: 2445 Z-score: 2887.7 bits: 543.2 E(): 3.8e-152 Smith-Waterman score: 2445; 92.839% identity (97.954% similar) in 391 aa overlap (20-410:1-391) 10 20 30 40 50 60 KIAA02 GLGVPIPSVDYARSDSGAAMIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEA :::.:::::::::::::::::::::::::: :::::::::: gi|126 MIELVAELSRGPVFLAGEALECVVTVTNPLSPTATSASSEA 10 20 30 40 70 80 90 100 110 120 KIAA02 LAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPKILFC :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|126 LAWASAQIHCQFHASESRVALPPPDSSQPDVQPESQTVFLPHRGERGQCILSTPPKILFC 50 60 70 80 90 100 130 140 150 160 170 180 KIAA02 DLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVL :::::::::::::::::::.::::::::::::::::::::::::: :::::::::::::: gi|126 DLRLDPGESKSYSYSEVLPVEGPPSFRGQSVKYVYKLTIGCQRVNCPITLLRVPLRVLVL 110 120 130 140 150 160 190 200 210 220 230 240 KIAA02 TGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSCRSLHLYNISDGRG ::.::. :::::.::::::::::.: :.::: ::::::: :::::: :::.::::::::: gi|126 TGFQDALFPQDEVVAPSSPFLEEEEVGRKDSRLAELAGEFLMAATSRRSLYLYNISDGRG 170 180 190 200 210 220 250 260 270 280 290 300 KIAA02 KVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGAGGVPSV ::::::::::::::::::.::::::::::::::::::::::: :::::::::::.:.::: gi|126 KVGTFGIFKSVYRLGEDVIGTLNLGEGTVACLQFSVSLQTEETVQPEYQRRRGASGTPSV 230 240 250 260 270 280 310 320 330 340 350 360 KIAA02 SHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFVTSREPGLVLLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|126 SHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFVTSREPGLTLLPP 290 300 310 320 330 340 370 380 390 400 410 KIAA02 VEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTSTITI .:::.:..:::::::::::::::::::::::::::.::::::::.::.:: gi|126 MEQPKPVVWTGPEQVPVDTFSWDLPIKVLPTSPTLVSYAAPGPSASTVTI 350 360 370 380 390 >>gi|149565674|ref|XP_001518701.1| PREDICTED: hypothetic (597 aa) initn: 2363 init1: 2363 opt: 2363 Z-score: 2788.2 bits: 525.4 E(): 1.3e-146 Smith-Waterman score: 2363; 89.541% identity (95.408% similar) in 392 aa overlap (19-410:206-597) 10 20 30 40 KIAA02 GLGVPIPSVDYARSDSGAAMIEVVAELSRGPVFLAGEALECVVTVTNP ::::::: :::::::::::::::::::::: gi|149 GEGGTGPGPQVSFSGNSGERPGRANLSLLPAMIEVVASLSRGPVFLAGEALECVVTVTNP 180 190 200 210 220 230 50 60 70 80 90 100 KIAA02 LPPTATSASSEALAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQ : ::::::::::::::::::::::::::::: :::::::::::::.:::::::::::::: gi|149 LSPTATSASSEALAWASAQIHCQFHASESRVILPPPDSSQPDVQPESQTVFLPHRGERGQ 240 250 260 270 280 290 110 120 130 140 150 160 KIAA02 CILSTPPKILFCDLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPI ::::::::::::::::::::::::::.::::..::::::::::::::::::::::::::: gi|149 CILSTPPKILFCDLRLDPGESKSYSYTEVLPVDGPPSFRGQSVKYVYKLTIGCQRVNSPI 300 310 320 330 340 350 170 180 190 200 210 220 KIAA02 TLLRVPLRVLVLTGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSCR :::::::::::::::::. ::::::::::::::::.:. .::: ::::::: :::::: : gi|149 TLLRVPLRVLVLTGLQDACFPQDEAVAPSSPFLEEEESRRKDSQLAELAGELLMAATSRR 360 370 380 390 400 410 230 240 250 260 270 280 KIAA02 SLHLYNISDGRGKVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEY .:::::::::.:::::: :::::::::::.::::.: ::.:::::::::::::: ::::: gi|149 NLHLYNISDGHGKVGTFCIFKSVYRLGEDIVGTLSLEEGAVACLQFSVSLQTEESVQPEY 420 430 440 450 460 470 290 300 310 320 330 340 KIAA02 QRRRGAGGVPSVSHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFV :::::.:: :.::::::::::::::::.:::: ::::::::::::::::::.:::::::: gi|149 QRRRGSGGPPAVSHVTHARHQESCLHTARTSFCLPIPLSSTPGFCTAIVSLRWRLHFEFV 480 490 500 510 520 530 350 360 370 380 390 400 KIAA02 TSREPGLVLLPPVEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTSTI ::::::::::::.: :: :: :::::::::::::::::::::::. :::..:::::.:. gi|149 TSREPGLVLLPPTEWPESRTWMGPEQVPVDTFSWDLPIKVLPTSPAQASYSTPGPSTNTV 540 550 560 570 580 590 410 KIAA02 TI :: gi|149 TI >>gi|74206640|dbj|BAE41575.1| unnamed protein product [M (363 aa) initn: 2335 init1: 2335 opt: 2335 Z-score: 2758.3 bits: 519.1 E(): 6.2e-145 Smith-Waterman score: 2335; 97.191% identity (99.157% similar) in 356 aa overlap (20-375:1-356) 10 20 30 40 50 60 KIAA02 GLGVPIPSVDYARSDSGAAMIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEA ::::::::::::::::::::::::::::::::::::::::: gi|742 MIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEA 10 20 30 40 70 80 90 100 110 120 KIAA02 LAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPKILFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPKILFC 50 60 70 80 90 100 130 140 150 160 170 180 KIAA02 DLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVL ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|742 DLRLDPGESKSYSYSEVLPTEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVL 110 120 130 140 150 160 190 200 210 220 230 240 KIAA02 TGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSCRSLHLYNISDGRG ::::::.:::::::::::::::::..:::::::::::::::::::::::::::::::::: gi|742 TGLQDVHFPQDEAVAPSSPFLEEDDSGKKDSWLAELAGERLMAATSCRSLHLYNISDGRG 170 180 190 200 210 220 250 260 270 280 290 300 KIAA02 KVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGAGGVPSV :::::::::::::::::::::::::::::::::::::::::::::::::::::.: .::: gi|742 KVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGTGVAPSV 230 240 250 260 270 280 310 320 330 340 350 360 KIAA02 SHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRLHFEFVTSREPGLVLLPP :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|742 SHVTHARHQESCLHTTRTSFSLPIPLCSTPGFCTAIVSLKWRLHFEFVTSREPGLVLLPP 290 300 310 320 330 340 370 380 390 400 410 KIAA02 VEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTSTITI .:::::.:::::::: gi|742 LEQPEPATWTGPEQVNWNHVGL 350 360 410 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 08:09:24 2009 done: Wed Mar 4 08:13:53 2009 Total Scan time: 1464.770 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]