Gene/Protein Characteristic Table for KIAA0031
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Product ID ORK00375
Accession No D21163
Description elongation factor Tu GTP binding domain containing 2, transcript variant 1
Clone name ha01047
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (3784 bp)
Predicted protein sequence (977 aa)
Flexi ORF Clone FXC00375
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0031 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 3784 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning Warning
Integrity of 3' end
Length of 3'UTR 805 bp
Genome contig ID gi51511734r_40183363
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 17 r 40283363 40332318 28 99.8 Perfect prediction
Features of the protein sequence

Length: 977 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q15029 0 100.0 116 kDa U5 smal...
Homo sapiens
XP_548058 0 99.9 similar to 116 ...
Canis lupus fam...
Q5R6E0 0 99.8 116 kDa U5 smal...
Pongo abelii
BAF85797 0 99.8 unnamed protein...
Homo sapiens
AAH02360 0 99.9 Elongation fact...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR000795 136 149 PR00315 Protein synthesis factor
IPR000795 181 189 PR00315 Protein synthesis factor
IPR000795 206 216 PR00315 Protein synthesis factor
IPR000795 222 233 PR00315 Protein synthesis factor
IPR000795 258 267 PR00315 Protein synthesis factor
HMMPfam IPR000795 132 447 PF00009 Protein synthesis factor
IPR004161 494 571 PF03144 Translation elongation factor EFTu/EF1A
IPR005517 710 829 PF03764 Translation elongation factor EFG/EF2
IPR000640 831 920 PF00679 Translation elongation factor EFG/EF2
HMMTigr IPR005225 132 306 TIGR00231 Small GTP-binding protein domain
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 17
Experimental conditions
Panel name Genebridge 4
PCR product length 138 bp
PCR conditions 95 °C15 sec58 °C60 sec30 cycles
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