Gene/Protein Characteristic Table for FLJ00246
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Product ID ORK05134
Accession No AK074173
Clone name sj08543
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4535 bp)
Predicted protein sequence (1486 aa)
Source Human spleen
Rouge ID mFLJ00246 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 4535 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Features of the protein sequence
Description

Length: 1486 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAB84999 0 100.0 FLJ00246 protei...
Homo sapiens
EAW62054 0 100.0 hCG2045902, iso...
Homo sapiens
XP_856884 0 98.0 similar to mult...
Canis lupus fam...
XP_856716 0 98.0 similar to mult...
Canis lupus fam...
XP_856802 0 98.0 similar to mult...
Canis lupus fam...
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB014597 3.4e-107 79.1 KIAA0697
AB033076 2.3e-16 32.0 KIAA1250
AB002377 1.9e-15 25.8 KIAA0379
AB033049 3.6e-14 27.5 KIAA1223
AB046856 2.5e-10 32.0 KIAA1636
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR002110 485 497 PR01415 Ankyrin
IPR002110 680 692 PR01415 Ankyrin
HMMPfam IPR002110 218 250 PF00023 Ankyrin
IPR002110 251 283 PF00023 Ankyrin
IPR002110 285 317 PF00023 Ankyrin
IPR002110 318 350 PF00023 Ankyrin
IPR002110 351 383 PF00023 Ankyrin
IPR002110 385 417 PF00023 Ankyrin
IPR002110 418 450 PF00023 Ankyrin
IPR002110 451 483 PF00023 Ankyrin
IPR002110 484 516 PF00023 Ankyrin
IPR002110 518 550 PF00023 Ankyrin
IPR002110 551 580 PF00023 Ankyrin
IPR002110 581 613 PF00023 Ankyrin
IPR002110 633 665 PF00023 Ankyrin
IPR002110 667 699 PF00023 Ankyrin
IPR002110 700 732 PF00023 Ankyrin
IPR002110 1087 1119 PF00023 Ankyrin
IPR002110 1120 1152 PF00023 Ankyrin
IPR002110 1154 1186 PF00023 Ankyrin
IPR002110 1187 1219 PF00023 Ankyrin
IPR002110 1222 1254 PF00023 Ankyrin
IPR002110 1256 1288 PF00023 Ankyrin
IPR002110 1289 1321 PF00023 Ankyrin
IPR002110 1324 1356 PF00023 Ankyrin
IPR002110 1357 1389 PF00023 Ankyrin
IPR002110 1390 1419 PF00023 Ankyrin
HMMSmart IPR002110 218 247 SM00248 Ankyrin
IPR002110 251 280 SM00248 Ankyrin
IPR002110 285 314 SM00248 Ankyrin
IPR002110 318 347 SM00248 Ankyrin
IPR002110 351 380 SM00248 Ankyrin
IPR002110 385 414 SM00248 Ankyrin
IPR002110 418 447 SM00248 Ankyrin
IPR002110 451 480 SM00248 Ankyrin
IPR002110 484 513 SM00248 Ankyrin
IPR002110 518 547 SM00248 Ankyrin
IPR002110 548 577 SM00248 Ankyrin
IPR002110 581 610 SM00248 Ankyrin
IPR002110 633 662 SM00248 Ankyrin
IPR002110 667 696 SM00248 Ankyrin
IPR002110 700 729 SM00248 Ankyrin
IPR002110 1087 1116 SM00248 Ankyrin
IPR002110 1120 1149 SM00248 Ankyrin
IPR002110 1154 1183 SM00248 Ankyrin
IPR002110 1187 1216 SM00248 Ankyrin
IPR002110 1222 1251 SM00248 Ankyrin
IPR002110 1256 1285 SM00248 Ankyrin
IPR002110 1289 1318 SM00248 Ankyrin
IPR002110 1324 1353 SM00248 Ankyrin
IPR002110 1357 1386 SM00248 Ankyrin
IPR002110 1390 1423 SM00248 Ankyrin
ProfileScan NULL 20 108 PS50315 NULL
IPR002110 218 1412 PS50297 Ankyrin
IPR002110 285 317 PS50088 Ankyrin
IPR002110 318 350 PS50088 Ankyrin
IPR002110 351 383 PS50088 Ankyrin
IPR002110 385 417 PS50088 Ankyrin
IPR002110 418 450 PS50088 Ankyrin
IPR002110 451 483 PS50088 Ankyrin
IPR002110 484 516 PS50088 Ankyrin
IPR002110 548 580 PS50088 Ankyrin
IPR002110 581 613 PS50088 Ankyrin
IPR002110 633 665 PS50088 Ankyrin
IPR002110 667 699 PS50088 Ankyrin
IPR002110 1087 1119 PS50088 Ankyrin
IPR002110 1120 1152 PS50088 Ankyrin
IPR002110 1154 1186 PS50088 Ankyrin
IPR002110 1187 1219 PS50088 Ankyrin
IPR002110 1222 1254 PS50088 Ankyrin
IPR002110 1256 1288 PS50088 Ankyrin
IPR002110 1289 1321 PS50088 Ankyrin
IPR002110 1324 1356 PS50088 Ankyrin
IPR002110 1357 1389 PS50088 Ankyrin
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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