Gene/Protein Characteristic Table for FLJ00261

Description

Product ID:	ORK01043
Accession No.:	AK160365
Alias Name:
Clone Name:	sh06537 [Vector Info]
Source:	Human spleen

Features of the cloned DNA sequence	Description

Length: 5541
Physical map
Restiction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Features of the predicted protein sequence	Description

Length: 1651

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAD18708	100.0	FLJ00261 protei...	Homo sapiens
Q12774	100.0	Rho guanine nuc...	Homo sapiens
NP_005426	99.9	rho guanine nuc...	Homo sapiens
XP_001094223	93.2	similar to rho ...	Macaca mulatta
CAH18061	99.5	hypothetical pr...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB020722	4.3e-17	29.5	KIAA0915

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

BlastProDom IPR001452 1567 1616 PD000066 SH3

HMMPfam IPR000219 1232 1411 PF00621 DH domain

IPR001849 1445 1556 PF00169 Pleckstrin-like

IPR001452 1567 1623 PF00018 SH3

NULL 1568 1623 PF07653 NULL

HMMSmart IPR000219 1232 1411 SM00325 DH domain

IPR001849 1445 1558 SM00233 Pleckstrin-like

IPR001452 1567 1624 SM00326 SH3

ProfileScan NULL 200 455 PS50313 NULL

IPR000694 737 910 PS50099 Proline-rich region

IPR000219 1228 1412 PS50010 DH domain

IPR001849 1444 1556 PS50003 Pleckstrin-like

IPR001452 1564 1625 PS50002 SH3

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

- - - -

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR001452	1567	1616	PD000066	SH3
HMMPfam	IPR000219	1232	1411	PF00621	DH domain
IPR001849	1445	1556	PF00169	Pleckstrin-like
IPR001452	1567	1623	PF00018	SH3
NULL	1568	1623	PF07653	NULL
HMMSmart	IPR000219	1232	1411	SM00325	DH domain
IPR001849	1445	1558	SM00233	Pleckstrin-like
IPR001452	1567	1624	SM00326	SH3
ProfileScan	NULL	200	455	PS50313	NULL
IPR000694	737	910	PS50099	Proline-rich region
IPR000219	1228	1412	PS50010	DH domain
IPR001849	1444	1556	PS50003	Pleckstrin-like
IPR001452	1564	1625	PS50002	SH3

Method	From	To	amino acid sequence
-	-	-	-

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	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO