Tomato SBM DataBase

Warning!

This website will be shut down on December 10, 2026, as its mission is now complete. All contents have been integrated into our new database, Kazusa Genome Atlas. See you there again, stepping forward into the future!

Contents


Keyword Search
Keyword:
(ex; receptor; IPR001611; At1g75820; SlSBM_S00216)

Case sensitive
Include Word unit

Stringency:(ex; 1e-10)

 SlSBM
 Output format is:


Similarity Search
Database:
Full length sequences
Predicted CDS sequences
Predicted AA sequences
Micro-Tom BAC End sequences

Search program:
BLASTN search gene DNA sequence(s) using a nucleotide query.
BLASTP search gene protein sequence(s) using protein query.
TBLASTN search translated genome DNA sequence(s) using a protein query.

Number of search results:
for which scores will be reported:
for which alignments will be reported:

Query sequence  (FASTA format recommended)

Advanced settings:
Expectation value

Filter query sequence (DUST with blastn, SEG with tblastn)
Perform gapped alignment
HTML output