TRIM35 ORF clone pFN21ASDA1098

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Halotag ORF Clone pFN21ASDA1098

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Clone info.

Species

human

Clone Name

pFN21ASDA1098 Sequence (with vector) Restriction Map

Product ID

FHC01625

Flexi Clone PID

FXC01625

ORF Sequence

DNA sequence (1479 bp)
Protein sequence (493 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384113]

Gene

KIAA1098

Symbol

TRIM35

Alias : HLS5, MAIR

Description

tripartite motif containing 35, transcript variant 1

Original Clone ID

hk07318

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1479 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 493 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6056.2 1.9e-138 100.0 TRIM35 CCDS78322.1 4e-40 79.9 TRIM35 CCDS34378.1 1.4e-22 30.7 TRIM39 CCDS376.1 2.7e-22 29.0 TRIM62 CCDS32220.1 1.9e-21 29.3 TRIM69 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 300 317 PR01407 Butyrophylin-like IPR003879 338 362 PR01407 Butyrophylin-like IPR003879 419 443 PR01407 Butyrophylin-like HMMPfam IPR018957 21 60 PF00097 Zinc finger IPR000315 99 137 PF00643 Zinc finger IPR003877 353 468 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 21 60 SM00184 Zinc finger IPR000315 96 137 SM00336 Zinc finger IPR006574 301 352 SM00589 SPRY-associated IPR018355 353 484 SM00449 SPla/RYanodine receptor subgroup ProfileScan IPR001841 21 61 PS50089 Zinc finger IPR000315 96 137 PS50119 Zinc finger IPR001870 284 487 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_741983 493 617007 100.0 100.0 NP_742013 488 605700 30.7 95.1 NP_660215 468 607868 31.2 96.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA1098 Download

>KIAA1098  1479 bp
ATGGAGCGGAGTCCCGACGTGTCCCCCGGGCCTTCCCGCTCCTTCAAGGAGGAGTTGCTC
TGCGCCGTCTGCTACGACCCCTTCCGCGACGCAGTCACTCTGCGCTGCGGCCACAACTTC
TGCCGCGGGTGCGTGAGCCGCTGCTGGGAGGTGCAGGTGTCGCCCACCTGCCCAGTGTGC
AAAGACCGCGCGTCACCCGCCGACCTGCGCACCAACCACACCCTCAACAACCTGGTGGAG
AAGCTGCTGCGCGAGGAGGCCGAGGGCGCGCGCTGGACCAGCTACCGCTTCTCGCGTGTC
TGCCGCCTGCACCGCGGACAGCTCAGCCTCTTCTGCCTCGAGGACAAGGAGCTGCTGTGC
TGCTCCTGCCAGGCCGACCCCCGACACCAGGGGCACCGCGTGCAGCCGGTGAAGGACACT
GCCCACGACTTTCGGGCCAAGTGCAGGAACATGGAGCATGCACTGCGGGAGAAGGCCAAG
GCCTTCTGGGCCATGCGGCGCTCCTATGAGGCCATCGCCAAGCACAATCAGGTGGAGGCT
GCATGGCTGGAAGGCCGGATCCGGCAGGAGTTTGATAAGCTTCGCGAGTTCTTGAGAGTG
GAGGAGCAGGCCATTCTGGATGCCATGGCCGAGGAGACAAGGCAGAAGCAACTTCTGGCC
GACGAGAAGATGAAGCAGCTCACAGAGGAGACGGAGGTGCTGGCACATGAGATCGAGCGG
CTGCAGATGGAGATGAAGGAGGACGACGTTTCTTTTCTCATGAAACACAAGAGCCGAAAA
CGCCGACTCTTCTGCACCATGGAGCCAGAGCCAGTCCAGCCCGGCATGCTTATCGATGTC
TGCAAGTACCTGGGCTCCCTGCAGTACCGCGTCTGGAAGAAGATGCTTGCATCTGTGGAA
TCTGTACCCTTCAGCTTTGACCCCAACACCGCAGCTGGCTGGCTCTCCGTGTCTGACGAC
CTCACCAGCGTCACCAACCATGGCTACCGCGTGCAGGTGGAGAACCCGGAACGCTTCTCC
TCGGCGCCCTGCCTGCTGGGCTCCCGTGTCTTCTCACAGGGCTCGCACGCCTGGGAGGTG
GCCCTTGGGGGGCTGCAGAGCTGGAGGGTGGGCGTGGTACGTGTGCGCCAGGACTCGGGC
GCTGAGGGCCACTCACACAGCTGCTACCACGACACACGCTCGGGCTTCTGGTATGTCTGC
CGCACGCAGGGCGTGGAGGGGGACCACTGCGTGACCTCGGACCCAGCCACGTCGCCCCTG
GTCCTGGCCATCCCACGCCGCCTGCGTGTGGAGCTGGAGTGTGAGGAGGGCGAGCTGTCT
TTCTATGACGCGGAGCGCCACTGCCACCTGTACACCTTCCACGCCCGCTTTGGGGAGGTT
CGCCCCTACTTCTACCTGGGGGGTGCACGGGGCGCCGGGCCTCCAGAGCCTTTGCGCATC
TGCCCCTTGCACATCAGTGTCAAGGAAGAACTGGATGGC

ORF Protein

Cloned ORF protein sequence for pFN21ASDA1098 Download

>KIAA1098  493 aa
MERSPDVSPGPSRSFKEELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVC
KDRASPADLRTNHTLNNLVEKLLREEAEGARWTSYRFSRVCRLHRGQLSLFCLEDKELLC
CSCQADPRHQGHRVQPVKDTAHDFRAKCRNMEHALREKAKAFWAMRRSYEAIAKHNQVEA
AWLEGRIRQEFDKLREFLRVEEQAILDAMAEETRQKQLLADEKMKQLTEETEVLAHEIER
LQMEMKEDDVSFLMKHKSRKRRLFCTMEPEPVQPGMLIDVCKYLGSLQYRVWKKMLASVE
SVPFSFDPNTAAGWLSVSDDLTSVTNHGYRVQVENPERFSSAPCLLGSRVFSQGSHAWEV
ALGGLQSWRVGVVRVRQDSGAEGHSHSCYHDTRSGFWYVCRTQGVEGDHCVTSDPATSPL
VLAIPRRLRVELECEEGELSFYDAERHCHLYTFHARFGEVRPYFYLGGARGAGPPEPLRI
CPLHISVKEELDG

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA1098 Download

>pFN21ASDA1098  6208 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGGAGCGGAGTCCCGA
CGTGTCCCCCGGGCCTTCCCGCTCCTTCAAGGAGGAGTTGCTCTGCGCCGTCTGCTACGA
CCCCTTCCGCGACGCAGTCACTCTGCGCTGCGGCCACAACTTCTGCCGCGGGTGCGTGAG
CCGCTGCTGGGAGGTGCAGGTGTCGCCCACCTGCCCAGTGTGCAAAGACCGCGCGTCACC
CGCCGACCTGCGCACCAACCACACCCTCAACAACCTGGTGGAGAAGCTGCTGCGCGAGGA
GGCCGAGGGCGCGCGCTGGACCAGCTACCGCTTCTCGCGTGTCTGCCGCCTGCACCGCGG
ACAGCTCAGCCTCTTCTGCCTCGAGGACAAGGAGCTGCTGTGCTGCTCCTGCCAGGCCGA
CCCCCGACACCAGGGGCACCGCGTGCAGCCGGTGAAGGACACTGCCCACGACTTTCGGGC
CAAGTGCAGGAACATGGAGCATGCACTGCGGGAGAAGGCCAAGGCCTTCTGGGCCATGCG
GCGCTCCTATGAGGCCATCGCCAAGCACAATCAGGTGGAGGCTGCATGGCTGGAAGGCCG
GATCCGGCAGGAGTTTGATAAGCTTCGCGAGTTCTTGAGAGTGGAGGAGCAGGCCATTCT
GGATGCCATGGCCGAGGAGACAAGGCAGAAGCAACTTCTGGCCGACGAGAAGATGAAGCA
GCTCACAGAGGAGACGGAGGTGCTGGCACATGAGATCGAGCGGCTGCAGATGGAGATGAA
GGAGGACGACGTTTCTTTTCTCATGAAACACAAGAGCCGAAAACGCCGACTCTTCTGCAC
CATGGAGCCAGAGCCAGTCCAGCCCGGCATGCTTATCGATGTCTGCAAGTACCTGGGCTC
CCTGCAGTACCGCGTCTGGAAGAAGATGCTTGCATCTGTGGAATCTGTACCCTTCAGCTT
TGACCCCAACACCGCAGCTGGCTGGCTCTCCGTGTCTGACGACCTCACCAGCGTCACCAA
CCATGGCTACCGCGTGCAGGTGGAGAACCCGGAACGCTTCTCCTCGGCGCCCTGCCTGCT
GGGCTCCCGTGTCTTCTCACAGGGCTCGCACGCCTGGGAGGTGGCCCTTGGGGGGCTGCA
GAGCTGGAGGGTGGGCGTGGTACGTGTGCGCCAGGACTCGGGCGCTGAGGGCCACTCACA
CAGCTGCTACCACGACACACGCTCGGGCTTCTGGTATGTCTGCCGCACGCAGGGCGTGGA
GGGGGACCACTGCGTGACCTCGGACCCAGCCACGTCGCCCCTGGTCCTGGCCATCCCACG
CCGCCTGCGTGTGGAGCTGGAGTGTGAGGAGGGCGAGCTGTCTTTCTATGACGCGGAGCG
CCACTGCCACCTGTACACCTTCCACGCCCGCTTTGGGGAGGTTCGCCCCTACTTCTACCT
GGGGGGTGCACGGGGCGCCGGGCCTCCAGAGCCTTTGCGCATCTGCCCCTTGCACATCAG
TGTCAAGGAAGAACTGGATGGCTACGTAGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT