ZNF500 ORF clone pFN21ASDA0557

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Halotag ORF Clone pFN21ASDA0557

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Clone info.

Species

human

Clone Name

pFN21ASDA0557 Sequence (with vector) Restriction Map

Product ID

FHC00562

Flexi Clone PID

FXC00562

ORF Sequence

DNA sequence (1440 bp)
Protein sequence (480 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383907]

Gene

KIAA0557

Symbol

ZNF500

Alias : ZKSCAN18, ZSCAN50

Description

zinc finger protein 500, transcript variant 1

Original Clone ID

hh01334

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1440 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 480 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32383.1 4e-120 100.0 ZNF500 CCDS76814.1 2.2e-107 100.0 ZNF500 CCDS10495.1 2.6e-33 43.8 ZNF213 CCDS4647.1 1.1e-31 41.7 ZKSCAN4 CCDS4650.1 2.2e-31 42.0 ZKSCAN3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 45 137 PF02023 Transcription regulator SCAN IPR001909 224 247 PF01352 Krueppel-associated box IPR007087 325 347 PF00096 Zinc finger IPR007087 353 375 PF00096 Zinc finger IPR007087 381 403 PF00096 Zinc finger IPR007087 437 459 PF00096 Zinc finger HMMSmart IPR003309 46 152 SM00431 Transcription regulator SCAN IPR015880 325 347 SM00355 Zinc finger IPR015880 353 375 SM00355 Zinc finger IPR015880 381 403 SM00355 Zinc finger IPR015880 409 431 SM00355 Zinc finger IPR015880 437 459 SM00355 Zinc finger ProfileScan IPR003309 50 131 PS50804 Transcription regulator SCAN IPR007087 325 352 PS50157 Zinc finger IPR007087 353 380 PS50157 Zinc finger IPR007087 381 408 PS50157 Zinc finger IPR007087 409 436 PS50157 Zinc finger IPR007087 437 464 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001128127 459 608387 43.8 94.0 NP_004211 459 608387 43.8 94.0 XP_005249152 545 611643 41.7 92.1 NP_061983 545 611643 41.7 92.1 NP_077819 538 612791 42.0 92.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA0557 Download

>KIAA0557  1440 bp
ATGGCCACTGTCCCTGGCCTCCAGCCCCTGCCAACCTTGGAGCAGGACCTGGAACAGGAA
GAGATCCTGATTGTGAAGGTGGAGGAGGACTTCTGCTTGGAAGAGGAGCCCTCCGTGGAG
ACGGAGGACCCCAGCCCTGAGACTTTCCGCCAGCTCTTCCGGCTCTTCTGCTACCAGGAG
GTGGCTGGGCCCCGGGAGGCCCTGAGCCGCCTCTGGGAGCTGTGCTGCCGCTGGCTGCGG
CCGGAGCTGCGCACCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCCTGACT
GTGCTGCCGGGGGAGATCCAGGCTCGGGTACGCGAGCAGCAGCCGGAGAGCGGTGAGGAG
GCCGTGGTCCTCGTGGAAGGGCTGCAGCGGAAGCCCAGGAAACACAGGCAGCGGGGCTCA
GAGCTGCTTTCTGATGACGAGGTGCCCCTCGGGATAGGGGGACAGTTCTTAAAACACCAG
GCAGAGGCTCAGCCAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAG
CCCCCAGCCCAGCTGAGCCACAGGCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGC
CCTCCAGCTCCCCGGCATCAGGAGATGGCGTCAGCCTCGCCCTTCCTTTCGGCCTGGTCC
CAGGTGCCCGTGAACTTGGAGGACGTGGCTGTATACCTTTCTGGGGAGGAGCCAAGATGC
ATGGACCCAGCTCAGCGGGACGCGCCGCTGGAGAATGAAGGACCTGGGATCCAGTTGGAG
GACGGCGGTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCG
GCACGATGCCAGGGGCCTGGCCACCCGCTCCCAGGTCAGAGGCCAGCCCCAGTCAGGGGC
TTGGTCAGGCCTGATCAGCCAAGAGGCGGCCCCCCACCAGGAAGACGGGCTTCCCATGGG
GCTGACAAGCCGTACACCTGCCCCGAATGTGGCAAAGGCTTCAGCAAGACGTCCCACTTG
ACCAAGCACCAGCGCACACACACGGGCGAGCGGCCTTACAAGTGCCTAGTCTGTGGGAAG
GGCTTTAGCGACCGCTCCAACTTCAGCACGCACCAGAGGGTGCACACAGGCGAGAAGCCC
TACCCGTGCCCCGAGTGTGGGAAGCGCTTCAGCCAGAGCTCCAGCCTGGTCATCCACCGC
AGGACACACAGCGGGGAGCGGCCCTATGCCTGCACCCAGTGCGGGAAGCGCTTCAACAAC
AGCTCGCACTTCAGCGCCCACCGCCGGACGCACACAGGTGAGAAGCCCTACACCTGCCCG
GCCTGTGGCCGGGGCTTCCGCCGGGGCACCGACCTGCACAAGCACCAGCGGACCCACATG
GGGGCAGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGGAGGCCCCGGTGCAAAAGCC

ORF Protein

Cloned ORF protein sequence for pFN21ASDA0557 Download

>KIAA0557  480 aa
MATVPGLQPLPTLEQDLEQEEILIVKVEEDFCLEEEPSVETEDPSPETFRQLFRLFCYQE
VAGPREALSRLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQARVREQQPESGEE
AVVLVEGLQRKPRKHRQRGSELLSDDEVPLGIGGQFLKHQAEAQPEDLSLEEEARFSSQQ
PPAQLSHRPQRGPLLWPERGPPAPRHQEMASASPFLSAWSQVPVNLEDVAVYLSGEEPRC
MDPAQRDAPLENEGPGIQLEDGGDGREDAPLRMEWYRVLSARCQGPGHPLPGQRPAPVRG
LVRPDQPRGGPPPGRRASHGADKPYTCPECGKGFSKTSHLTKHQRTHTGERPYKCLVCGK
GFSDRSNFSTHQRVHTGEKPYPCPECGKRFSQSSSLVIHRRTHSGERPYACTQCGKRFNN
SSHFSAHRRTHTGEKPYTCPACGRGFRRGTDLHKHQRTHMGAGSLPTLQPVAPGGPGAKA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA0557 Download

>pFN21ASDA0557  6169 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGGCCACTGTCCCTGG
CCTCCAGCCCCTGCCAACCTTGGAGCAGGACCTGGAACAGGAAGAGATCCTGATTGTGAA
GGTGGAGGAGGACTTCTGCTTGGAAGAGGAGCCCTCCGTGGAGACGGAGGACCCCAGCCC
TGAGACTTTCCGCCAGCTCTTCCGGCTCTTCTGCTACCAGGAGGTGGCTGGGCCCCGGGA
GGCCCTGAGCCGCCTCTGGGAGCTGTGCTGCCGCTGGCTGCGGCCGGAGCTGCGCACCAA
GGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCCTGACTGTGCTGCCGGGGGAGAT
CCAGGCTCGGGTACGCGAGCAGCAGCCGGAGAGCGGTGAGGAGGCCGTGGTCCTCGTGGA
AGGGCTGCAGCGGAAGCCCAGGAAACACAGGCAGCGGGGCTCAGAGCTGCTTTCTGATGA
CGAGGTGCCCCTCGGGATAGGGGGACAGTTCTTAAAACACCAGGCAGAGGCTCAGCCAGA
GGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCAGCCCAGCTGAG
CCACAGGCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCA
TCAGGAGATGGCGTCAGCCTCGCCCTTCCTTTCGGCCTGGTCCCAGGTGCCCGTGAACTT
GGAGGACGTGGCTGTATACCTTTCTGGGGAGGAGCCAAGATGCATGGACCCAGCTCAGCG
GGACGCGCCGCTGGAGAATGAAGGACCTGGGATCCAGTTGGAGGACGGCGGTGATGGCAG
GGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCC
TGGCCACCCGCTCCCAGGTCAGAGGCCAGCCCCAGTCAGGGGCTTGGTCAGGCCTGATCA
GCCAAGAGGCGGCCCCCCACCAGGAAGACGGGCTTCCCATGGGGCTGACAAGCCGTACAC
CTGCCCCGAATGTGGCAAAGGCTTCAGCAAGACGTCCCACTTGACCAAGCACCAGCGCAC
ACACACGGGCGAGCGGCCTTACAAGTGCCTAGTCTGTGGGAAGGGCTTTAGCGACCGCTC
CAACTTCAGCACGCACCAGAGGGTGCACACAGGCGAGAAGCCCTACCCGTGCCCCGAGTG
TGGGAAGCGCTTCAGCCAGAGCTCCAGCCTGGTCATCCACCGCAGGACACACAGCGGGGA
GCGGCCCTATGCCTGCACCCAGTGCGGGAAGCGCTTCAACAACAGCTCGCACTTCAGCGC
CCACCGCCGGACGCACACAGGTGAGAAGCCCTACACCTGCCCGGCCTGTGGCCGGGGCTT
CCGCCGGGGCACCGACCTGCACAAGCACCAGCGGACCCACATGGGGGCAGGCTCCTTGCC
GACGCTCCAGCCGGTGGCTCCTGGAGGCCCCGGTGCAAAAGCCTACGTAGTTTAAACGAA
TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG
CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG
CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA
CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT
GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT
TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC
AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG
ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC
GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT
ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA
GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC
AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT
CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT
CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG
CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC
ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA
CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT
GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT
GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG
ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA
CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA
ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC
ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG
CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT
ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT
ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC
AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG
ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG
GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG
GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA
GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA
ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA
TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA
AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG
GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT
GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG
CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA
AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT