OR1S2 ORF clone pFN21AE6087

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Halotag ORF Clone pFN21AE6087

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Clone info.

Species

human

Clone Name

pFN21AE6087 Sequence (with vector) Restriction Map

Product ID

FHC28015

ORF Sequence

DNA sequence (975 bp)
Protein sequence (325 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6087

Symbol

OR1S2

Alias : OR11-231

Description

olfactory receptor, family 1, subfamily S, member 2

Original Clone ID

cp96087

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 975 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 325 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31545.1 8.4e-94 100.0 OR1S2 CCDS35122.1 3.4e-50 56.0 OR1J4 CCDS10496.1 2.1e-49 54.5 OR1F1 CCDS32896.1 4.6e-49 54.3 OR1M1 CCDS35121.1 1.2e-47 54.7 OR1J2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 39 63 PR00237 GPCR IPR000276 72 93 PR00237 GPCR IPR000725 105 116 PR00245 Olfactory receptor IPR000276 117 139 PR00237 GPCR IPR000725 142 154 PR00245 Olfactory receptor IPR000276 153 174 PR00237 GPCR IPR000725 189 205 PR00245 Olfactory receptor IPR000276 212 235 PR00237 GPCR IPR000725 249 258 PR00245 Olfactory receptor IPR000276 285 311 PR00237 GPCR IPR000725 296 307 PR00245 Olfactory receptor HMMPfam IPR000276 54 303 PF00001 GPCR ProfileScan IPR017452 54 303 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 43 LFLSMYVVTVVGNGLIIVAISLD 65 PRIMARY 23 2 117 SIVFVVTDNLLLGTMAFDHFVAI 139 SECONDARY 23 3 152 RFGTLLTVISWFLSNIIALTHTL 174 PRIMARY 23 4 214 IVGLSVIIFPFVLIFFSYVCIIR 236 PRIMARY 23 5 254 CGSHLTIALLFYGTTVGVYFFP 275 SECONDARY 22 6 286 IGAVLFTVVTPMMNPFIYSLR 306 SECONDARY 21
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520808 322 603232 54.5 96.6 XP_011520809 312 603232 54.5 96.0 NP_036492 312 603232 54.5 96.0 NP_001005191 312 611538 52.4 94.5 NP_002539 312 164342 49.7 96.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6087 Download

>KIEE6087  975 bp
ATGAAGACTTTGTGTTCCTTTCTTCAGATCAGCAGAAATATGCATCAAGAAAACCAAACC
ACCATCACTGAATTCATTCTCCTGGGACTCTCCAACCAGGCTGAACATCAAAACCTCCTC
TTTGTGCTTTTCCTGAGTATGTATGTGGTCACTGTGGTTGGGAACGGGCTCATCATTGTG
GCTATCAGCTTGGATATATACCTTCACACCCCCATGTATCTCTTCCTTGCCTACCTATCC
TTTGCTGATATTTCCTCCATTTCCAACTCAGTCCCCAAAATGCTGGTGAATATTCAAACC
AACAGCCAATCCATCTCTTATGAGAGCTGCATCACACAGATGTACTTTTCTATTGTGTTT
GTCGTCACTGACAATTTGCTTTTGGGGACCATGGCCTTCGACCACTTTGTGGCGATCTGC
CACCCTCTGAACTATACAACTTTCATGCGGGCCAGGTTCGGCACTTTGCTCACAGTCATC
TCGTGGTTCCTCAGTAATATTATTGCTCTTACACACACCCTTCTGCTCATTCAATTGCTC
TTCTGTGACCACAACACTCTCCCACACTTCTTCTGTGACTTGGCCCCTCTGCTCAAACTG
TCCTGTTCAGATACAATGATCAATGAGCTTGTGTTGTTTATTGTGGGTTTATCAGTTATC
ATCTTCCCCTTTGTACTCATCTTCTTCTCCTATGTCTGCATCATCAGAGCTGTCCTGGGA
GTATCATCCACACAGGGAAAGTGGAAAGCCTTCTCCACTTGTGGCTCTCACCTGACAATT
GCATTACTGTTCTACGGAACCACTGTAGGCGTGTACTTTTTCCCCTCCTCCACTCACCCT
GAGGACACTGATAAGATTGGTGCTGTCCTATTCACTGTGGTGACACCCATGATGAACCCC
TTCATCTACAGCTTGAGGAATAAGGATATGAAAGGTGCCCTGAGAAAGCTCATCAATAGA
AAAATTTCTTCCCTT

ORF Protein

Cloned ORF protein sequence for pFN21AE6087 Download

>KIEE6087  325 aa
MKTLCSFLQISRNMHQENQTTITEFILLGLSNQAEHQNLLFVLFLSMYVVTVVGNGLIIV
AISLDIYLHTPMYLFLAYLSFADISSISNSVPKMLVNIQTNSQSISYESCITQMYFSIVF
VVTDNLLLGTMAFDHFVAICHPLNYTTFMRARFGTLLTVISWFLSNIIALTHTLLLIQLL
FCDHNTLPHFFCDLAPLLKLSCSDTMINELVLFIVGLSVIIFPFVLIFFSYVCIIRAVLG
VSSTQGKWKAFSTCGSHLTIALLFYGTTVGVYFFPSSTHPEDTDKIGAVLFTVVTPMMNP
FIYSLRNKDMKGALRKLINRKISSL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6087 Download

>pFN21AE6087  5680 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAAGACTTTGTGTTCCTTTCTTCAGATCAGCAG
AAATATGCATCAAGAAAACCAAACCACCATCACTGAATTCATTCTCCTGGGACTCTCCAA
CCAGGCTGAACATCAAAACCTCCTCTTTGTGCTTTTCCTGAGTATGTATGTGGTCACTGT
GGTTGGGAACGGGCTCATCATTGTGGCTATCAGCTTGGATATATACCTTCACACCCCCAT
GTATCTCTTCCTTGCCTACCTATCCTTTGCTGATATTTCCTCCATTTCCAACTCAGTCCC
CAAAATGCTGGTGAATATTCAAACCAACAGCCAATCCATCTCTTATGAGAGCTGCATCAC
ACAGATGTACTTTTCTATTGTGTTTGTCGTCACTGACAATTTGCTTTTGGGGACCATGGC
CTTCGACCACTTTGTGGCGATCTGCCACCCTCTGAACTATACAACTTTCATGCGGGCCAG
GTTCGGCACTTTGCTCACAGTCATCTCGTGGTTCCTCAGTAATATTATTGCTCTTACACA
CACCCTTCTGCTCATTCAATTGCTCTTCTGTGACCACAACACTCTCCCACACTTCTTCTG
TGACTTGGCCCCTCTGCTCAAACTGTCCTGTTCAGATACAATGATCAATGAGCTTGTGTT
GTTTATTGTGGGTTTATCAGTTATCATCTTCCCCTTTGTACTCATCTTCTTCTCCTATGT
CTGCATCATCAGAGCTGTCCTGGGAGTATCATCCACACAGGGAAAGTGGAAAGCCTTCTC
CACTTGTGGCTCTCACCTGACAATTGCATTACTGTTCTACGGAACCACTGTAGGCGTGTA
CTTTTTCCCCTCCTCCACTCACCCTGAGGACACTGATAAGATTGGTGCTGTCCTATTCAC
TGTGGTGACACCCATGATGAACCCCTTCATCTACAGCTTGAGGAATAAGGATATGAAAGG
TGCCCTGAGAAAGCTCATCAATAGAAAAATTTCTTCCCTTGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT