OR6C1 ORF clone pFN21AE5973

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5973

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Clone info.

Species

human

Clone Name

pFN21AE5973 Sequence (with vector) Restriction Map

Product ID

FHC28141

ORF Sequence

DNA sequence (936 bp)
Protein sequence (312 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5973

Symbol

OR6C1

Alias : OST267

Description

olfactory receptor, family 6, subfamily C, member 1

Original Clone ID

cp95973

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 936 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 312 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31818.1 1.4e-74 99.0 OR6C1 CCDS31819.1 7.8e-60 75.7 OR6C3 CCDS31820.1 6.3e-56 71.4 OR6C75 CCDS31816.1 5.1e-54 68.4 OR6C74 CCDS31823.1 5.1e-53 69.5 OR6C76 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 24 48 PR00237 GPCR IPR000276 57 78 PR00237 GPCR IPR000725 90 101 PR00245 Olfactory receptor IPR000276 102 124 PR00237 GPCR IPR000725 127 139 PR00245 Olfactory receptor IPR000276 138 159 PR00237 GPCR IPR000725 174 190 PR00245 Olfactory receptor IPR000725 234 243 PR00245 Olfactory receptor IPR000276 270 296 PR00237 GPCR IPR000725 281 292 PR00245 Olfactory receptor HMMPfam IPR000276 39 288 PF00001 GPCR ProfileScan IPR017452 39 288 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 21 FQVVIFVFLLITYMLSITGNLTL 43 SECONDARY 23 2 93 NNCIVQLFFFILLGVTEFYLLAA 115 PRIMARY 23 3 138 VCTLLVFTSWLVSFLIIFPALML 160 PRIMARY 23 4 201 AAFTLMFTLALIFLSYIYIIRTI 223 PRIMARY 23 5 238 TCSSHMVVISISYGSCIFMYIKP 260 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001001957 314 616729 44.7 95.2 NP_036492 312 603232 41.5 98.1 XP_011520809 312 603232 41.5 98.1 NP_835462 317 608493 43.6 95.2 XP_011520808 322 603232 41.5 98.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5973 Download

>KIEE5973  936 bp
ATGAGAAACCATACAGAAATAACAGAGTTTATTCTTCTGGGATTAACAGATGACCCAAAT
TTTCAGGTTGTAATCTTTGTCTTCCTGCTCATCACCTACATGCTCAGCATCACTGGGAAC
CTGACCCTTATCACAATTACCCTGCTGGATTCCCACCTGCAGACCCCCATGTATTTCTTC
CTCAGAAATTTCTCCATATTAGAAATTTCGTTCACAACCGTCAGTATACCCAAGTTTCTG
GGTAACATTATTTCAGGAGATAAAACCATTTCCTTTAATAATTGCATAGTTCAGTTATTT
TTCTTCATTCTCTTGGGAGTCACAGAGTTTTACCTTCTGGCTGCCATGTCCTATGACCGC
TATGTGGCCATCTGCAAGCCTCTGCATTACTTGAGTATCATGAATCGAAGAGTCTGCACA
CTGCTTGTTTTTACTTCTTGGCTGGTTTCATTCTTAATCATATTCCCAGCACTCATGTTG
CTTTTAAAGCTTGATTACTGTAGGTCTAATATTATTGACCATTTTACCTGTGATTATTTT
CCACTGCTGCAACTTGCTTGTTCAGACACAAAATTCTTAGAGGTGATGGGATTTTCTTGT
GCTGCGTTTACTCTAATGTTCACTTTGGCATTAATATTTCTGTCCTACATATACATTATC
AGAACAATTTTGAGAATTCCTTCTACTAGTCAGAGGACAAAGGCCTTTTCCACATGTTCT
TCCCACATGGTTGTTATCTCCATCTCTTATGGCAGCTGCATTTTTATGTACATTAAACCC
TCAGCAAAAGATAGAGTGTCCTTGAGCAAGGGAGTGGCAATACTAAACACCTCAGTAGCC
CCCATGATGAACCCCTTTATTTACAGCCTAAGAAATCAGCAAGTCAAGCAAGCTTTCATT
AACATGGCAAGGAAGACTGTATTTTTCACAAGCACA

ORF Protein

Cloned ORF protein sequence for pFN21AE5973 Download

>KIEE5973  312 aa
MRNHTEITEFILLGLTDDPNFQVVIFVFLLITYMLSITGNLTLITITLLDSHLQTPMYFF
LRNFSILEISFTTVSIPKFLGNIISGDKTISFNNCIVQLFFFILLGVTEFYLLAAMSYDR
YVAICKPLHYLSIMNRRVCTLLVFTSWLVSFLIIFPALMLLLKLDYCRSNIIDHFTCDYF
PLLQLACSDTKFLEVMGFSCAAFTLMFTLALIFLSYIYIIRTILRIPSTSQRTKAFSTCS
SHMVVISISYGSCIFMYIKPSAKDRVSLSKGVAILNTSVAPMMNPFIYSLRNQQVKQAFI
NMARKTVFFTST

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5973 Download

>pFN21AE5973  5641 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGAAACCATACAGAAATAACAGAGTTTATTCT
TCTGGGATTAACAGATGACCCAAATTTTCAGGTTGTAATCTTTGTCTTCCTGCTCATCAC
CTACATGCTCAGCATCACTGGGAACCTGACCCTTATCACAATTACCCTGCTGGATTCCCA
CCTGCAGACCCCCATGTATTTCTTCCTCAGAAATTTCTCCATATTAGAAATTTCGTTCAC
AACCGTCAGTATACCCAAGTTTCTGGGTAACATTATTTCAGGAGATAAAACCATTTCCTT
TAATAATTGCATAGTTCAGTTATTTTTCTTCATTCTCTTGGGAGTCACAGAGTTTTACCT
TCTGGCTGCCATGTCCTATGACCGCTATGTGGCCATCTGCAAGCCTCTGCATTACTTGAG
TATCATGAATCGAAGAGTCTGCACACTGCTTGTTTTTACTTCTTGGCTGGTTTCATTCTT
AATCATATTCCCAGCACTCATGTTGCTTTTAAAGCTTGATTACTGTAGGTCTAATATTAT
TGACCATTTTACCTGTGATTATTTTCCACTGCTGCAACTTGCTTGTTCAGACACAAAATT
CTTAGAGGTGATGGGATTTTCTTGTGCTGCGTTTACTCTAATGTTCACTTTGGCATTAAT
ATTTCTGTCCTACATATACATTATCAGAACAATTTTGAGAATTCCTTCTACTAGTCAGAG
GACAAAGGCCTTTTCCACATGTTCTTCCCACATGGTTGTTATCTCCATCTCTTATGGCAG
CTGCATTTTTATGTACATTAAACCCTCAGCAAAAGATAGAGTGTCCTTGAGCAAGGGAGT
GGCAATACTAAACACCTCAGTAGCCCCCATGATGAACCCCTTTATTTACAGCCTAAGAAA
TCAGCAAGTCAAGCAAGCTTTCATTAACATGGCAAGGAAGACTGTATTTTTCACAAGCAC
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T