OR52E4 ORF clone pFN21AE5950

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Halotag ORF Clone pFN21AE5950

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Clone info.

Species

human

Clone Name

pFN21AE5950 Sequence (with vector) Restriction Map

Product ID

FHC27943

ORF Sequence

DNA sequence (936 bp)
Protein sequence (312 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5950

Symbol

OR52E4

Alias : OR11-55

Description

olfactory receptor, family 52, subfamily E, member 4

Original Clone ID

cp95950

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 936 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 312 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31401.1 1.5e-94 98.7 OR52E4 CCDS31400.1 1.1e-67 69.4 OR52E8 CCDS31371.1 7e-66 68.8 OR52E2 CCDS53597.1 1.2e-64 67.0 OR52E6 CCDS31370.1 3.6e-58 58.0 OR52J3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 28 52 PR00237 GPCR IPR000276 61 82 PR00237 GPCR IPR000725 94 105 PR00245 Olfactory receptor IPR000276 106 128 PR00237 GPCR IPR000725 131 143 PR00245 Olfactory receptor IPR000276 152 176 PR00237 GPCR IPR000725 178 194 PR00245 Olfactory receptor IPR000725 237 246 PR00245 Olfactory receptor IPR000276 275 301 PR00237 GPCR IPR000725 286 297 PR00245 Olfactory receptor HMMPfam IPR000276 43 293 PF00001 GPCR ProfileScan IPR017452 43 293 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 27 IWISFPFCIVYLIAIVGNMTILF 49 PRIMARY 23 2 106 IHMFTGMETVLLVVMAYDRFVAI 128 SECONDARY 23 3 148 SVVVGRNLVLVTPFVFLILHLPF 170 PRIMARY 23 4 183 HMGLAGLACAPIKINIIYGLMVI 205 PRIMARY 23 5 211 DVILIASSYVLILRAVFHLPSQD 233 PRIMARY 23 6 272 YIHILLANLYVVVPPALNPVIYG 294 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_689643 318 611267 47.1 98.4 NP_110401 320 611268 44.7 98.7 NP_001005487 307 611677 35.8 94.6 NP_001005216 311 615016,615082 35.0 94.6 XP_011520809 312 603232 36.5 94.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5950 Download

>KIEE5950  936 bp
ATGCCTTCTATCAATGACACCCACTTCTATCCCCCCTTCTTCCTCCTGCTAGGAATACCA
GGACTGGACACTTTACATATCTGGATTTCTTTCCCATTCTGTATTGTGTACCTGATTGCC
ATTGTGGGGAATATGACCATTCTCTTTGTGATCAAAACTGAACATAGTCTACACCAGCCC
ATGTTCTACTTCCTGGCCATGTTGTCTATGATTGATCTGGGTCTGTCCACATCCACTATC
CCCAAAATGCTAGGAATCTTCTGGTTCAACCTCCAAGAGATCAGCTTTGGGGGATGCCTT
CTTCAGATGTTCTTTATTCACATGTTTACAGGCATGGAGACTGTTCTGTTGGTGGTCATG
GCTTATGACCGCTTTGTTGCCATCTGCAACCCTCTCCAGTACACCATGATCCTCACCAAT
AAAACCATCAGTATCCTAGCTTCTGTGGTTGTTGGAAGAAATTTAGTTCTTGTAACCCCA
TTTGTGTTTCTCATTCTGCATCTGCCATTCTGTGGGCATAACATCATACCTCACACATAC
TGTGAGCACATGGGTCTGGCCGGGTTGGCCTGTGCACCCATTAAGATCAACATAATCTAT
GGGCTCATGGTGATTTCTTATATTATTGTGGATGTGATCTTAATTGCCTCTTCCTATGTG
CTTATCCTTCGAGCTGTTTTTCACCTTCCCTCTCAAGATGTCCGACTAAAGGCCTTCAAT
ACCTGTGGTTCTCATGTCTGTGTTATGCTGTGCTTTTACACACCAGCATTTTTTTCTTTT
ATGACACATCGTTTTGGCCAAAACATTCCCCACTATATCCATATTCTTTTGGCTAACCTG
TATGTGGTTGTCCCACCTGCCCTTAACCCTGTCATTTATGGAGTCAGGACCAAGCAGATC
CGAGAGCAAATTGTGAAAATATTTGTACAGAAAGAA

ORF Protein

Cloned ORF protein sequence for pFN21AE5950 Download

>KIEE5950  312 aa
MPSINDTHFYPPFFLLLGIPGLDTLHIWISFPFCIVYLIAIVGNMTILFVIKTEHSLHQP
MFYFLAMLSMIDLGLSTSTIPKMLGIFWFNLQEISFGGCLLQMFFIHMFTGMETVLLVVM
AYDRFVAICNPLQYTMILTNKTISILASVVVGRNLVLVTPFVFLILHLPFCGHNIIPHTY
CEHMGLAGLACAPIKINIIYGLMVISYIIVDVILIASSYVLILRAVFHLPSQDVRLKAFN
TCGSHVCVMLCFYTPAFFSFMTHRFGQNIPHYIHILLANLYVVVPPALNPVIYGVRTKQI
REQIVKIFVQKE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5950 Download

>pFN21AE5950  5641 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCTTCTATCAATGACACCCACTTCTATCCCCC
CTTCTTCCTCCTGCTAGGAATACCAGGACTGGACACTTTACATATCTGGATTTCTTTCCC
ATTCTGTATTGTGTACCTGATTGCCATTGTGGGGAATATGACCATTCTCTTTGTGATCAA
AACTGAACATAGTCTACACCAGCCCATGTTCTACTTCCTGGCCATGTTGTCTATGATTGA
TCTGGGTCTGTCCACATCCACTATCCCCAAAATGCTAGGAATCTTCTGGTTCAACCTCCA
AGAGATCAGCTTTGGGGGATGCCTTCTTCAGATGTTCTTTATTCACATGTTTACAGGCAT
GGAGACTGTTCTGTTGGTGGTCATGGCTTATGACCGCTTTGTTGCCATCTGCAACCCTCT
CCAGTACACCATGATCCTCACCAATAAAACCATCAGTATCCTAGCTTCTGTGGTTGTTGG
AAGAAATTTAGTTCTTGTAACCCCATTTGTGTTTCTCATTCTGCATCTGCCATTCTGTGG
GCATAACATCATACCTCACACATACTGTGAGCACATGGGTCTGGCCGGGTTGGCCTGTGC
ACCCATTAAGATCAACATAATCTATGGGCTCATGGTGATTTCTTATATTATTGTGGATGT
GATCTTAATTGCCTCTTCCTATGTGCTTATCCTTCGAGCTGTTTTTCACCTTCCCTCTCA
AGATGTCCGACTAAAGGCCTTCAATACCTGTGGTTCTCATGTCTGTGTTATGCTGTGCTT
TTACACACCAGCATTTTTTTCTTTTATGACACATCGTTTTGGCCAAAACATTCCCCACTA
TATCCATATTCTTTTGGCTAACCTGTATGTGGTTGTCCCACCTGCCCTTAACCCTGTCAT
TTATGGAGTCAGGACCAAGCAGATCCGAGAGCAAATTGTGAAAATATTTGTACAGAAAGA
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T