SPATA6 ORF clone pFN21AE5603

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5603

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Clone info.

Species

human

Clone Name

pFN21AE5603 Sequence (with vector) Restriction Map

Product ID

FHC09022

ORF Sequence

DNA sequence (1416 bp)
Protein sequence (472 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5603

Symbol

SPATA6

Alias : HASH, SRF-1, SRF1

Description

spermatogenesis associated 6, transcript variant 2

Original Clone ID

oc95603

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1416 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 472 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS65535.1 8.5e-178 99.6 SPATA6 CCDS551.1 1.6e-143 96.3 SPATA6 CCDS72787.1 2.6e-109 93.2 SPATA6 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001273167 472 613947 99.6 100.0 XP_006710762 436 613947 95.8 87.3 NP_061946 488 613947 96.3 100.0 XP_016857000 410 613947 99.5 80.9 XP_016856998 459 613947 99.5 80.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5603 Download

>KIEE5603  1416 bp
ATGCCGAAGGTGAAGGCGCTGCAGTGCGCCCTGGCGCTGGAGATCAGCTCAGTAACTTGC
CCAGGAGTCGTGCCTAAAGACATAGAGGACATCTATCTTAGCATCTGTGTGTTTGGCCAA
TACAAAAAGACACAATGTGTCCCAGCCACTTTTCCCCTGGTCTTCAATGCCAGAATGGTG
TTTGAAAAGGTGTTCCCGGACGCAGTAGATCCTGGAGATGTGGTTACACAGCTTGAATAT
GATACAGCAGTGTTCGAGTTGATACAGCTAGTTCCACCAGTGGGTGAAACACTGTCTACG
TATGACGAAAATACACGAGATTTCATGTTTCCGGGTCCAAACCAAATGTCTGGACACCAT
GATTCAAACCGCCAGGTTACCATGAGGAGGATTTCTGGCCTTCGAGGAAATGCTCCAAGG
CTGGAATTTTCTACGACTTCAGTGATTACTGAATGTCTGATAAGTTCAAGGAAATGCCAC
ACTCAGGATAAATTTATTTACCATTTGGCTCCAGTTGAAAAATCACATGGCAGACTGCAA
AACAGAACATCAAGATCACAAAAGAAAAAATCCAAGTCACCTGAGAGAAGTAAATACTGT
ATAAATGCAAAAAACTACGAACAGCCTACAATTTCTTCAAAATCACACTCTCCATCTCCC
TACACAAAAAGACGCATGTGTGAGCTATCTGAAGACACCAGGCGGCGGCTGGCCCATTTA
AATCTGGGACCCTATGAGTTCAAAAAAGAAACAGATAAACCTCCATTTGTGATTAGACAT
GTTGATCCCCCAAGTCCCAGGGCTGATACTTTATTGGGATCTTCTGGAAGAGACTGTGAA
AGAGATGGATGGTCAAGGGTGCACAATGATCATTCTCATCTTGGCTGCTGCCGACCCAAG
GATTATAAGGTTATCAGGACACCCCATGGGAGAGACTTCGATGACTCTTTAGAAAAATGT
GAAGAGTATTTGAGCCCAAGGTCGTGTAGTAAGCCCCGGCATTCAGCGAGGACCTTGCTA
GTCCATTCAGCACCCTCAACAATGCCAAAGCATTCTCCAAGCCCTGTGTTAAATAGAGCT
TCTCTCAGGGAAAGATTTCATTCTGATTGGTGTTCACCTTCAAACTGCGATGAGATCCAT
GACCGGGATGAGAGAGACCTAGAGAAAGATGATGAACTGGAACTGAAAAGAAGTCTTTTA
TGTAGAGACTCTGCCTATGACAGTGACCCCGAGTATAGCTCATGTCAGCAGCCACGTGGC
ACTTTCCATTTGGATGACGGTGAATACTGGTCCAACAGGGCAGCCTCTTATAAGGGAAAA
TCCCACCGACCCATCTTTGAGAACAGCATGGACAAGATGTACAGGAACTTATACAAAAAG
GCCTGTAGTTCTGCTTCACATACACAGGAAAGCTTC

ORF Protein

Cloned ORF protein sequence for pFN21AE5603 Download

>KIEE5603  472 aa
MPKVKALQCALALEISSVTCPGVVPKDIEDIYLSICVFGQYKKTQCVPATFPLVFNARMV
FEKVFPDAVDPGDVVTQLEYDTAVFELIQLVPPVGETLSTYDENTRDFMFPGPNQMSGHH
DSNRQVTMRRISGLRGNAPRLEFSTTSVITECLISSRKCHTQDKFIYHLAPVEKSHGRLQ
NRTSRSQKKKSKSPERSKYCINAKNYEQPTISSKSHSPSPYTKRRMCELSEDTRRRLAHL
NLGPYEFKKETDKPPFVIRHVDPPSPRADTLLGSSGRDCERDGWSRVHNDHSHLGCCRPK
DYKVIRTPHGRDFDDSLEKCEEYLSPRSCSKPRHSARTLLVHSAPSTMPKHSPSPVLNRA
SLRERFHSDWCSPSNCDEIHDRDERDLEKDDELELKRSLLCRDSAYDSDPEYSSCQQPRG
TFHLDDGEYWSNRAASYKGKSHRPIFENSMDKMYRNLYKKACSSASHTQESF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5603 Download

>pFN21AE5603  6121 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCGAAGGTGAAGGCGCTGCAGTGCGCCCTGGC
GCTGGAGATCAGCTCAGTAACTTGCCCAGGAGTCGTGCCTAAAGACATAGAGGACATCTA
TCTTAGCATCTGTGTGTTTGGCCAATACAAAAAGACACAATGTGTCCCAGCCACTTTTCC
CCTGGTCTTCAATGCCAGAATGGTGTTTGAAAAGGTGTTCCCGGACGCAGTAGATCCTGG
AGATGTGGTTACACAGCTTGAATATGATACAGCAGTGTTCGAGTTGATACAGCTAGTTCC
ACCAGTGGGTGAAACACTGTCTACGTATGACGAAAATACACGAGATTTCATGTTTCCGGG
TCCAAACCAAATGTCTGGACACCATGATTCAAACCGCCAGGTTACCATGAGGAGGATTTC
TGGCCTTCGAGGAAATGCTCCAAGGCTGGAATTTTCTACGACTTCAGTGATTACTGAATG
TCTGATAAGTTCAAGGAAATGCCACACTCAGGATAAATTTATTTACCATTTGGCTCCAGT
TGAAAAATCACATGGCAGACTGCAAAACAGAACATCAAGATCACAAAAGAAAAAATCCAA
GTCACCTGAGAGAAGTAAATACTGTATAAATGCAAAAAACTACGAACAGCCTACAATTTC
TTCAAAATCACACTCTCCATCTCCCTACACAAAAAGACGCATGTGTGAGCTATCTGAAGA
CACCAGGCGGCGGCTGGCCCATTTAAATCTGGGACCCTATGAGTTCAAAAAAGAAACAGA
TAAACCTCCATTTGTGATTAGACATGTTGATCCCCCAAGTCCCAGGGCTGATACTTTATT
GGGATCTTCTGGAAGAGACTGTGAAAGAGATGGATGGTCAAGGGTGCACAATGATCATTC
TCATCTTGGCTGCTGCCGACCCAAGGATTATAAGGTTATCAGGACACCCCATGGGAGAGA
CTTCGATGACTCTTTAGAAAAATGTGAAGAGTATTTGAGCCCAAGGTCGTGTAGTAAGCC
CCGGCATTCAGCGAGGACCTTGCTAGTCCATTCAGCACCCTCAACAATGCCAAAGCATTC
TCCAAGCCCTGTGTTAAATAGAGCTTCTCTCAGGGAAAGATTTCATTCTGATTGGTGTTC
ACCTTCAAACTGCGATGAGATCCATGACCGGGATGAGAGAGACCTAGAGAAAGATGATGA
ACTGGAACTGAAAAGAAGTCTTTTATGTAGAGACTCTGCCTATGACAGTGACCCCGAGTA
TAGCTCATGTCAGCAGCCACGTGGCACTTTCCATTTGGATGACGGTGAATACTGGTCCAA
CAGGGCAGCCTCTTATAAGGGAAAATCCCACCGACCCATCTTTGAGAACAGCATGGACAA
GATGTACAGGAACTTATACAAAAAGGCCTGTAGTTCTGCTTCACATACACAGGAAAGCTT
CGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T