TRIM41 ORF clone pFN21AE3931

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE3931

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Clone info.

Species

human

Clone Name

pFN21AE3931 Sequence (with vector) Restriction Map

Product ID

FHC08970

ORF Sequence

DNA sequence (1635 bp)
Protein sequence (545 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3931

Symbol

TRIM41

Alias : RINCK

Description

tripartite motif containing 41

Original Clone ID

cp93931

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1635 bp
Restriction map A Restriction map B

Features of the protein sequence

Description

Length: 545 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4466.1 4.8e-154 100.0 TRIM41 CCDS4465.1 8.2e-113 100.0 TRIM41 CCDS34378.1 1.8e-31 37.1 TRIM39 CCDS78121.1 1.8e-28 39.8 RPP21 CCDS4467.1 9.6e-28 61.7 TRIM52 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 344 361 PR01407 Butyrophylin-like IPR003879 361 378 PR01407 Butyrophylin-like IPR003879 383 407 PR01407 Butyrophylin-like IPR003879 485 509 PR01407 Butyrophylin-like IPR003879 516 534 PR01407 Butyrophylin-like HMMPfam IPR000315 139 178 PF00643 Zinc finger IPR022081 197 306 PF12307 Domain of unknown function DUF3631 IPR003877 398 540 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR000315 137 178 SM00336 Zinc finger IPR006574 345 397 SM00589 SPRY-associated IPR018355 398 545 SM00449 SPla/RYanodine receptor subgroup ProfileScan IPR000315 137 178 PS50119 Zinc finger IPR001870 328 545 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_291027 630 610530 100.0 100.0 XP_006714992 543 610530 93.7 81.3 NP_742013 488 605700 37.1 82.9 NP_976038 511 609315 36.6 84.2 NP_067076 518 605700 35.2 82.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3931 Download

>KIEE3931  1635 bp
ATGCGGGATGAAGACTACGAGGGTGACATGGAGGAGGAGGTCGAGGAGGAAGAAGAGGGT
GTGTTCTGGACCAGTGGCATGAGCAGGTCCAGCTGGGACAACATGGACTATGTGTGGGAG
GAGGAGGACGAGGAGGAAGACCTGGACTACTACTTGGGGGACATGGAGGAGGAGGACCTG
AGGGGGGAGGATGAGGAGGACGAGGAGGAAGTGCTGGAGGAGGTTGAGGAAGAGGATCTA
GACCCCGTCACCCCACTGCCCCCGCCTCCAGCCCCTCGGAGGTGCTTCACATGCCCTCAG
TGCCGAAAGAGCTTTCCTCGGCGGAGCTTCCGCCCCAACCTGCAGCTGGCCAATATGGTC
CAGGTGATTCGGCAGATGCACCCAACCCCTGGTCGAGGGAGCCGCGTGACCGATCAGGGC
ATCTGTCCCAAACACCAAGAAGCCCTGAAGCTCTTCTGCGAGGTAGACGAAGAGGCCATC
TGTGTGGTGTGCCGAGAATCCAGGAGCCACAAACAGCACAGCGTGGTGCCATTGGAGGAG
GTGGTGCAGGAGTACAAGGCCAAACTGCAGGGGCACGTGGAACCACTGAGGAAGCACCTG
GAGGCAGTGCAGAAGATGAAAGCCAAGGAGGAGAGGCGAGTGACAGAACTGAAGAGCCAG
ATGAAGTCAGAGCTGGCAGCGGTGGCCTCGGAGTTTGGGCGACTGACACGGTTTCTGGCT
GAAGAGCAGGCAGGGCTGGAACGGCGTCTCAGAGAGATGCATGAAGCCCAGCTGGGGCGT
GCGGGAGCCGCGGCTAGTCGCCTTGCAGAACAGGCCGCCCAGCTCAGTCGCCTGCTGGCA
GAGGCCCAGGAGCGGAGCCAGCAGGGGGGTCTCCGGCTGCTCCAGGACATCAAGGAGACT
TTCAATAGGTGTGAAGAGGTACAGCTGCAGCCCCCAGAGGTCTGGTCCCCTGACCCGTGC
CAACCCCATAGCCATGACTTCCTGACAGATGCCATCGTGAGGAAAATGAGCCGGATGTTC
TGTCAGGCTGCGAGAGTGGACCTGACGCTGGACCCTGACACGGCTCACCCGGCCCTGATG
CTGTCCCCTGACCGCCGGGGGGTCCGCCTGGCAGAGCGGCGGCAGGAGGTTGCTGACCAT
CCCAAGCGCTTCTCGGCCGACTGCTGCGTACTGGGGGCCCAGGGCTTCCGCTCCGGCCGG
CACTACTGGGAGGTAGAGGTGGGCGGGCGGCGGGGCTGGGCGGTGGGTGCTGCCCGTGAA
TCAACCCATCATAAGGAAAAGGTGGGCCCTGGGGGTTCCTCCGTGGGCAGCGGGGATGCC
AGCTCCTCGCGCCATCACCATCGCCGCCGCCGGCTCCACCTGCCCCAGCAGCCCCTGCTC
CAGCGGGAAGTGTGGTGCGTGGGCACCAACGGCAAACGCTATCAGGCCCAGAGCTCCACA
GAACAGACGCTGCTGAGCCCCAGTGAGAAACCAAGGCGCTTTGGTGTGTACCTGGACTAT
GAAGCTGGGCGCCTGGGCTTCTACAACGCAGAGACTCTAGCCCACGTGCACACCTTCTCG
GCTGCCTTCCTGGGCGAGCGTGTCTTTCCTTTCTTCCGGGTGCTCTCCAAGGGCACCCGC
ATCAAGCTCTGCCCT

ORF Protein

Cloned ORF protein sequence for pFN21AE3931 Download

>KIEE3931  545 aa
MRDEDYEGDMEEEVEEEEEGVFWTSGMSRSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDL
RGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMV
QVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEE
VVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLA
EEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLSRLLAEAQERSQQGGLRLLQDIKET
FNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALM
LSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARE
STHHKEKVGPGGSSVGSGDASSSRHHHRRRRLHLPQQPLLQREVWCVGTNGKRYQAQSST
EQTLLSPSEKPRRFGVYLDYEAGRLGFYNAETLAHVHTFSAAFLGERVFPFFRVLSKGTR
IKLCP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3931 Download

>pFN21AE3931  6340 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCGGGATGAAGACTACGAGGGTGACATGGAGGA
GGAGGTCGAGGAGGAAGAAGAGGGTGTGTTCTGGACCAGTGGCATGAGCAGGTCCAGCTG
GGACAACATGGACTATGTGTGGGAGGAGGAGGACGAGGAGGAAGACCTGGACTACTACTT
GGGGGACATGGAGGAGGAGGACCTGAGGGGGGAGGATGAGGAGGACGAGGAGGAAGTGCT
GGAGGAGGTTGAGGAAGAGGATCTAGACCCCGTCACCCCACTGCCCCCGCCTCCAGCCCC
TCGGAGGTGCTTCACATGCCCTCAGTGCCGAAAGAGCTTTCCTCGGCGGAGCTTCCGCCC
CAACCTGCAGCTGGCCAATATGGTCCAGGTGATTCGGCAGATGCACCCAACCCCTGGTCG
AGGGAGCCGCGTGACCGATCAGGGCATCTGTCCCAAACACCAAGAAGCCCTGAAGCTCTT
CTGCGAGGTAGACGAAGAGGCCATCTGTGTGGTGTGCCGAGAATCCAGGAGCCACAAACA
GCACAGCGTGGTGCCATTGGAGGAGGTGGTGCAGGAGTACAAGGCCAAACTGCAGGGGCA
CGTGGAACCACTGAGGAAGCACCTGGAGGCAGTGCAGAAGATGAAAGCCAAGGAGGAGAG
GCGAGTGACAGAACTGAAGAGCCAGATGAAGTCAGAGCTGGCAGCGGTGGCCTCGGAGTT
TGGGCGACTGACACGGTTTCTGGCTGAAGAGCAGGCAGGGCTGGAACGGCGTCTCAGAGA
GATGCATGAAGCCCAGCTGGGGCGTGCGGGAGCCGCGGCTAGTCGCCTTGCAGAACAGGC
CGCCCAGCTCAGTCGCCTGCTGGCAGAGGCCCAGGAGCGGAGCCAGCAGGGGGGTCTCCG
GCTGCTCCAGGACATCAAGGAGACTTTCAATAGGTGTGAAGAGGTACAGCTGCAGCCCCC
AGAGGTCTGGTCCCCTGACCCGTGCCAACCCCATAGCCATGACTTCCTGACAGATGCCAT
CGTGAGGAAAATGAGCCGGATGTTCTGTCAGGCTGCGAGAGTGGACCTGACGCTGGACCC
TGACACGGCTCACCCGGCCCTGATGCTGTCCCCTGACCGCCGGGGGGTCCGCCTGGCAGA
GCGGCGGCAGGAGGTTGCTGACCATCCCAAGCGCTTCTCGGCCGACTGCTGCGTACTGGG
GGCCCAGGGCTTCCGCTCCGGCCGGCACTACTGGGAGGTAGAGGTGGGCGGGCGGCGGGG
CTGGGCGGTGGGTGCTGCCCGTGAATCAACCCATCATAAGGAAAAGGTGGGCCCTGGGGG
TTCCTCCGTGGGCAGCGGGGATGCCAGCTCCTCGCGCCATCACCATCGCCGCCGCCGGCT
CCACCTGCCCCAGCAGCCCCTGCTCCAGCGGGAAGTGTGGTGCGTGGGCACCAACGGCAA
ACGCTATCAGGCCCAGAGCTCCACAGAACAGACGCTGCTGAGCCCCAGTGAGAAACCAAG
GCGCTTTGGTGTGTACCTGGACTATGAAGCTGGGCGCCTGGGCTTCTACAACGCAGAGAC
TCTAGCCCACGTGCACACCTTCTCGGCTGCCTTCCTGGGCGAGCGTGTCTTTCCTTTCTT
CCGGGTGCTCTCCAAGGGCACCCGCATCAAGCTCTGCCCTGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT