ZSCAN5B ORF clone pFN21AE3219

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE3219

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Clone info.

Species

human

Clone Name

pFN21AE3219 Sequence (with vector) Restriction Map

Product ID

FHC12611

ORF Sequence

DNA sequence (1485 bp)
Protein sequence (495 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3219

Symbol

ZSCAN5B

Alias : ZNF371, ZNF495B

Description

zinc finger and SCAN domain containing 5B

Original Clone ID

cp93219

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1485 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 495 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS46203.1 3.6e-118 99.8 ZSCAN5B CCDS82403.1 1.1e-91 79.2 ZSCAN5A CCDS12941.1 4.5e-91 78.8 ZSCAN5A CCDS14648.1 4.8e-20 30.3 ZNF75D CCDS5671.2 1.3e-18 32.0 ZSCAN25 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 39 121 PF02023 Transcription regulator SCAN IPR007087 383 405 PF00096 Zinc finger IPR007087 439 461 PF00096 Zinc finger IPR007087 467 489 PF00096 Zinc finger HMMSmart IPR003309 40 148 SM00431 Transcription regulator SCAN IPR015880 355 377 SM00355 Zinc finger IPR015880 383 405 SM00355 Zinc finger IPR015880 411 433 SM00355 Zinc finger IPR015880 439 461 SM00355 Zinc finger IPR015880 467 489 SM00355 Zinc finger ProfileScan IPR003309 44 124 PS50804 Transcription regulator SCAN IPR007087 355 382 PS50157 Zinc finger IPR007087 383 410 PS50157 Zinc finger IPR007087 411 438 PS50157 Zinc finger IPR007087 439 466 PS50157 Zinc finger IPR007087 467 494 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005262526 510 314997 30.3 95.8 NP_009062 510 314997 30.3 95.8 XP_011529693 510 314997 30.3 95.8 XP_011520948 500 601473 30.0 97.2 NP_689908 518 300627 32.3 92.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3219 Download

>KIEE3219  1485 bp
ATGGCTGCAAATTGGACACTCTCATGGGGTCAGGGAGGACCCTGCAACAGCCCTGGGTCA
GACACTCCACGGTCTGTGGCGTCCCCAGAAACTCAACTTGGAAATCACGACAGGAACCCT
GAGACTTGGCACATGAATTTCAGGATGTTCAGCTGCCCAGAGGAGTCGGACCCCATCCAG
GCTCTGAGGAAACTCACTGAGCTGTGCCATCTGTGGCTGAGGCCCGACCTCCACACCAAA
GAGCAGATCCTGGACATGCTGGTGATGGAGCAGTTCATGATCTCCATGCCCCAGGAGCTC
CAGGTCTTAGTCAAGGTGAACGGTGTGCAGAGCTGCAAAGACCTGGAGGACCTGCTACGA
AATAACAGAAGACCCAAGAAATGGTCTATAGTCAACTTGCTCGGCAAAGAATATCTTATG
CTGAACTCAGATGTCGAGATGGCTGAAGCCCCCGCCAGTGTCAGAGATGATCCGAGAGAC
GTGTCCAGCCAGTGGGCCTCCTCTGTGAACCAGATGCATCCGGGGACAGGCCAGGCCCGC
CGAGAGCAGCAGATCCTGCCCAGGGTCGCTGCACTGTCCAGGAGGCAGGGAGAGGACTTT
CTGCTACACAAGAGTATTGACATAACAGGTGACCCAAACTCTCCGAGACCCAAGCAGACC
TTGGAGAAGGATCTGAAGGAAAACAGGGAAGAGAACCCAGGACTGTCATCCCCAGAGCCT
CAGCTTCCAAAGAGTCCCAATCTGGTGAGAGCAAAGGAGGGGAAGGAACCCCAGAAAAGA
GCCTCTGTGGAAAATGTGGATGCTGACACACCTTCTGCCTGCGTTGTGGAGAGAGAAGCT
TTGACTCACAGCGGGAACAGAGGAGATGCTCTGAATCTGAGCAGTCCCAAAAGAAGCAAA
CCAGATGCCTCCTCCATTTCCCAAGAAGAGCCTCAAGGAGAAGCCACACCTGTGGGCAAC
AGAGAATCCCCAGGACAAGCTGAGATCAATCCAGTTCATTCCCCAGGCCCTGCGGGCCCG
GTCAGTCACCCAGATGGCCAAGAAGCCAAGGCCCTGCCACCCTTTGCATGTGACGTGTGC
AATAAATCATTTAAGTATTTTTCCCAGCTAAGCATCCACAGGAGGTCACACACAGGAGAC
AGACCCTTTCAATGTGATCTCTGTCGGAAGCGCTTCTTGCAGCCCTCAGACCTCCGAGTT
CACCAGCGAGTCCACACTGGCGAGAGGCCCTACATGTGTGACGTCTGCCAAAAGCGGTTC
GCCCACGAGTCCACCTTACAGGGCCACAAGAGGATCCACACCGGGGAGAGGCCGTTTAAA
TGTAAATACTGCAGCAAAGTTTTCAGCCACAAGGGGAACCTGAACGTTCACCAGCGCACC
CACTCCGGAGAGAAGCCCTACAAATGTCCCACCTGTCAAAAGGCCTTCCGTCAGCTGGGG
ACATTCAAGCGTCACCTGAAAACACACCGGGAAACCACCTCCCAG

ORF Protein

Cloned ORF protein sequence for pFN21AE3219 Download

>KIEE3219  495 aa
MAANWTLSWGQGGPCNSPGSDTPRSVASPETQLGNHDRNPETWHMNFRMFSCPEESDPIQ
ALRKLTELCHLWLRPDLHTKEQILDMLVMEQFMISMPQELQVLVKVNGVQSCKDLEDLLR
NNRRPKKWSIVNLLGKEYLMLNSDVEMAEAPASVRDDPRDVSSQWASSVNQMHPGTGQAR
REQQILPRVAALSRRQGEDFLLHKSIDITGDPNSPRPKQTLEKDLKENREENPGLSSPEP
QLPKSPNLVRAKEGKEPQKRASVENVDADTPSACVVEREALTHSGNRGDALNLSSPKRSK
PDASSISQEEPQGEATPVGNRESPGQAEINPVHSPGPAGPVSHPDGQEAKALPPFACDVC
NKSFKYFSQLSIHRRSHTGDRPFQCDLCRKRFLQPSDLRVHQRVHTGERPYMCDVCQKRF
AHESTLQGHKRIHTGERPFKCKYCSKVFSHKGNLNVHQRTHSGEKPYKCPTCQKAFRQLG
TFKRHLKTHRETTSQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3219 Download

>pFN21AE3219  6190 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTGCAAATTGGACACTCTCATGGGGTCAGGG
AGGACCCTGCAACAGCCCTGGGTCAGACACTCCACGGTCTGTGGCGTCCCCAGAAACTCA
ACTTGGAAATCACGACAGGAACCCTGAGACTTGGCACATGAATTTCAGGATGTTCAGCTG
CCCAGAGGAGTCGGACCCCATCCAGGCTCTGAGGAAACTCACTGAGCTGTGCCATCTGTG
GCTGAGGCCCGACCTCCACACCAAAGAGCAGATCCTGGACATGCTGGTGATGGAGCAGTT
CATGATCTCCATGCCCCAGGAGCTCCAGGTCTTAGTCAAGGTGAACGGTGTGCAGAGCTG
CAAAGACCTGGAGGACCTGCTACGAAATAACAGAAGACCCAAGAAATGGTCTATAGTCAA
CTTGCTCGGCAAAGAATATCTTATGCTGAACTCAGATGTCGAGATGGCTGAAGCCCCCGC
CAGTGTCAGAGATGATCCGAGAGACGTGTCCAGCCAGTGGGCCTCCTCTGTGAACCAGAT
GCATCCGGGGACAGGCCAGGCCCGCCGAGAGCAGCAGATCCTGCCCAGGGTCGCTGCACT
GTCCAGGAGGCAGGGAGAGGACTTTCTGCTACACAAGAGTATTGACATAACAGGTGACCC
AAACTCTCCGAGACCCAAGCAGACCTTGGAGAAGGATCTGAAGGAAAACAGGGAAGAGAA
CCCAGGACTGTCATCCCCAGAGCCTCAGCTTCCAAAGAGTCCCAATCTGGTGAGAGCAAA
GGAGGGGAAGGAACCCCAGAAAAGAGCCTCTGTGGAAAATGTGGATGCTGACACACCTTC
TGCCTGCGTTGTGGAGAGAGAAGCTTTGACTCACAGCGGGAACAGAGGAGATGCTCTGAA
TCTGAGCAGTCCCAAAAGAAGCAAACCAGATGCCTCCTCCATTTCCCAAGAAGAGCCTCA
AGGAGAAGCCACACCTGTGGGCAACAGAGAATCCCCAGGACAAGCTGAGATCAATCCAGT
TCATTCCCCAGGCCCTGCGGGCCCGGTCAGTCACCCAGATGGCCAAGAAGCCAAGGCCCT
GCCACCCTTTGCATGTGACGTGTGCAATAAATCATTTAAGTATTTTTCCCAGCTAAGCAT
CCACAGGAGGTCACACACAGGAGACAGACCCTTTCAATGTGATCTCTGTCGGAAGCGCTT
CTTGCAGCCCTCAGACCTCCGAGTTCACCAGCGAGTCCACACTGGCGAGAGGCCCTACAT
GTGTGACGTCTGCCAAAAGCGGTTCGCCCACGAGTCCACCTTACAGGGCCACAAGAGGAT
CCACACCGGGGAGAGGCCGTTTAAATGTAAATACTGCAGCAAAGTTTTCAGCCACAAGGG
GAACCTGAACGTTCACCAGCGCACCCACTCCGGAGAGAAGCCCTACAAATGTCCCACCTG
TCAAAAGGCCTTCCGTCAGCTGGGGACATTCAAGCGTCACCTGAAAACACACCGGGAAAC
CACCTCCCAGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT