OR13C3 ORF clone pFN21AE0875

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Halotag ORF Clone pFN21AE0875

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Clone info.

Species

human

Clone Name

pFN21AE0875 Sequence (with vector) Restriction Map

Product ID

FHC11331

Flexi Clone PID

FXC11331

ORF Sequence

DNA sequence (1041 bp)
Protein sequence (347 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529293]

Gene

KIEE0875

Symbol

OR13C3

Alias : OR37G, OR9-8

Description

olfactory receptor, family 13, subfamily C, member 3

Original Clone ID

cp01275

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1041 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 347 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35089.1 4.1e-88 100.0 OR13C3 CCDS35088.1 1.6e-69 83.9 OR13C4 CCDS35092.1 8.2e-55 65.5 OR13C2 CCDS35093.1 1.8e-54 65.5 OR13C9 CCDS35090.1 3.1e-53 65.3 OR13C8 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 56 80 PR00237 GPCR IPR000276 89 110 PR00237 GPCR IPR000725 122 133 PR00245 Olfactory receptor IPR000276 134 156 PR00237 GPCR IPR000725 159 171 PR00245 Olfactory receptor IPR000725 206 222 PR00245 Olfactory receptor IPR000276 229 252 PR00237 GPCR IPR000725 266 275 PR00245 Olfactory receptor IPR000276 308 334 PR00237 GPCR IPR000725 319 330 PR00245 Olfactory receptor HMMPfam IPR000276 71 326 PF00001 GPCR ProfileScan IPR017452 71 326 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MIVQLICTVCFLAVNTFHVRSSF 23 SECONDARY 23 2 57 YFALILVMYLVILIGNGVLIIAS 79 PRIMARY 23 3 128 AVQMFFGFAMGSTECLLLGMMAF 150 SECONDARY 23 4 169 VAYVLMASVSWLSGGINSAVQTL 191 SECONDARY 23 5 206 HFACEILAVLKLACADISLNIIT 228 PRIMARY 23 6 237 LVLPLMVIFFSYMFILYTILQMN 259 PRIMARY 23 7 267 AFSTCSAHLTVVIIFYGTIFFM 288 PRIMARY 22 8 305 ALDKLISLFYGVVTPMLNPILYS 327 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001005216 311 615016,615082 45.7 90.2 XP_011514321 317 608497 46.6 90.2 XP_011514322 317 608497 46.6 90.2 NP_036501 317 608497 46.6 90.2 NP_009091 312 600578 46.0 89.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0875 Download

>KIEE0875  1041 bp
ATGATTGTTCAGTTAATTTGTACTGTTTGTTTCTTGGCAGTAAATACATTTCATGTTAGA
TCTTCTTTTGATTTCCTGAAAGCAGATGACATGGGTGAGATTAACCAGACACTTGTGTCA
GAATTTCTTCTTCTGGGTCTTTCTGGATACCCAAAGATTGAGATTGTTTACTTTGCTCTC
ATTCTAGTTATGTACCTAGTGATTCTAATTGGCAATGGTGTTCTAATCATAGCCAGCATC
TTTGATTCTCATTTTCACACACCAATGTACTTCTTCCTGGGCAACCTCTCTTTCCTGGAT
ATCTGCTATACATCCTCCTCTGTTCCCTCAACATTGGTGAGCTTAATCTCAAAGAAAAGA
AACATTTCCTTCTCTGGATGTGCAGTGCAGATGTTCTTTGGGTTTGCAATGGGGTCAACA
GAATGTCTGCTTCTTGGCATGATGGCATTTGATCGTTATGTGGCCATCTGCAACCCACTG
AGATACCCCATCATCCTGAGCAAGGTGGCGTATGTATTGATGGCTTCTGTGTCCTGGCTG
TCCGGTGGAATAAATTCAGCTGTGCAAACATTACTTGCCATGAGACTGCCTTTCTGTGGG
AATAATATTATCAATCATTTCGCATGTGAAATATTAGCTGTCCTCAAGCTGGCCTGTGCT
GATATATCCCTCAATATTATCACCATGGTGATATCAAATATGGCCTTCCTGGTTCTTCCA
CTGATGGTCATTTTTTTCTCCTATATGTTCATCCTCTACACCATCTTGCAAATGAATTCA
GCCACAGGAAGACGCAAGGCATTTTCCACGTGCTCAGCTCACCTGACTGTGGTGATCATA
TTTTACGGTACCATCTTCTTTATGTATGCGAAACCGAAGTCTCAAGACCTGATTGGGGAA
GAAAAATTGCAAGCATTAGACAAGCTCATTTCTCTGTTTTATGGGGTAGTGACACCCATG
CTGAATCCTATACTCTATAGCTTGAGAAATAAGGATGTAAAAGCTGCTGTAAAATATTTG
CTGAACAAAAAACCAATTCAC

ORF Protein

Cloned ORF protein sequence for pFN21AE0875 Download

>KIEE0875  347 aa
MIVQLICTVCFLAVNTFHVRSSFDFLKADDMGEINQTLVSEFLLLGLSGYPKIEIVYFAL
ILVMYLVILIGNGVLIIASIFDSHFHTPMYFFLGNLSFLDICYTSSSVPSTLVSLISKKR
NISFSGCAVQMFFGFAMGSTECLLLGMMAFDRYVAICNPLRYPIILSKVAYVLMASVSWL
SGGINSAVQTLLAMRLPFCGNNIINHFACEILAVLKLACADISLNIITMVISNMAFLVLP
LMVIFFSYMFILYTILQMNSATGRRKAFSTCSAHLTVVIIFYGTIFFMYAKPKSQDLIGE
EKLQALDKLISLFYGVVTPMLNPILYSLRNKDVKAAVKYLLNKKPIH

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0875 Download

>pFN21AE0875  5746 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATTGTTCAGTTAATTTGTACTGTTTGTTTCTT
GGCAGTAAATACATTTCATGTTAGATCTTCTTTTGATTTCCTGAAAGCAGATGACATGGG
TGAGATTAACCAGACACTTGTGTCAGAATTTCTTCTTCTGGGTCTTTCTGGATACCCAAA
GATTGAGATTGTTTACTTTGCTCTCATTCTAGTTATGTACCTAGTGATTCTAATTGGCAA
TGGTGTTCTAATCATAGCCAGCATCTTTGATTCTCATTTTCACACACCAATGTACTTCTT
CCTGGGCAACCTCTCTTTCCTGGATATCTGCTATACATCCTCCTCTGTTCCCTCAACATT
GGTGAGCTTAATCTCAAAGAAAAGAAACATTTCCTTCTCTGGATGTGCAGTGCAGATGTT
CTTTGGGTTTGCAATGGGGTCAACAGAATGTCTGCTTCTTGGCATGATGGCATTTGATCG
TTATGTGGCCATCTGCAACCCACTGAGATACCCCATCATCCTGAGCAAGGTGGCGTATGT
ATTGATGGCTTCTGTGTCCTGGCTGTCCGGTGGAATAAATTCAGCTGTGCAAACATTACT
TGCCATGAGACTGCCTTTCTGTGGGAATAATATTATCAATCATTTCGCATGTGAAATATT
AGCTGTCCTCAAGCTGGCCTGTGCTGATATATCCCTCAATATTATCACCATGGTGATATC
AAATATGGCCTTCCTGGTTCTTCCACTGATGGTCATTTTTTTCTCCTATATGTTCATCCT
CTACACCATCTTGCAAATGAATTCAGCCACAGGAAGACGCAAGGCATTTTCCACGTGCTC
AGCTCACCTGACTGTGGTGATCATATTTTACGGTACCATCTTCTTTATGTATGCGAAACC
GAAGTCTCAAGACCTGATTGGGGAAGAAAAATTGCAAGCATTAGACAAGCTCATTTCTCT
GTTTTATGGGGTAGTGACACCCATGCTGAATCCTATACTCTATAGCTTGAGAAATAAGGA
TGTAAAAGCTGCTGTAAAATATTTGCTGAACAAAAAACCAATTCACGTTTAAACGAATTC
GGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTG
CTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCAT
AACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAA
ACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCT
TTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTT
ATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAA
TGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATA
GCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTA
ATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATG
CTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT
CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA
AAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGC
GGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAA
GTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGC
CGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT
ACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACT
GCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCAC
AACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATA
CCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTA
TTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG
GATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGAT
AAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGT
AAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGA
AATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACC
GACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACC
GTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGT
TTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACC
TGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGC
CCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACT
TATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTG
CTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTA
TCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCA
AACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACG
AAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCC
TTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAAC
CATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTT
GCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGT
TTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGT
ACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAAC
CGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT