ZNF552 ORF clone pFN21AE0708

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Halotag ORF Clone pFN21AE0708

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Clone info.

Species

human

Clone Name

pFN21AE0708 Sequence (with vector) Restriction Map

Product ID

FHC11245

Flexi Clone PID

FXC11245

ORF Sequence

DNA sequence (1221 bp)
Protein sequence (407 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528918]

Gene

KIEE0708

Symbol

ZNF552

Description

zinc finger protein 552

Original Clone ID

cs02208

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1221 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 407 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12963.1 3.3e-93 100.0 ZNF552 CCDS46212.1 5.4e-67 76.0 ZNF814 CCDS56109.1 8e-64 77.8 ZNF587B CCDS82410.1 3.3e-60 68.3 ZNF418 CCDS42642.1 4.5e-60 68.0 ZNF418 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001909 14 54 PF01352 Krueppel-associated box IPR007087 268 290 PF00096 Zinc finger IPR007087 296 318 PF00096 Zinc finger IPR007087 324 346 PF00096 Zinc finger IPR007087 352 374 PF00096 Zinc finger HMMSmart IPR001909 14 67 SM00349 Krueppel-associated box IPR015880 91 113 SM00355 Zinc finger IPR015880 212 232 SM00355 Zinc finger IPR015880 268 290 SM00355 Zinc finger IPR015880 296 318 SM00355 Zinc finger IPR015880 324 346 SM00355 Zinc finger IPR015880 352 374 SM00355 Zinc finger IPR015880 380 402 SM00355 Zinc finger ProfileScan IPR001909 14 90 PS50805 Krueppel-associated box IPR007087 119 146 PS50157 Zinc finger IPR007087 212 239 PS50157 Zinc finger IPR007087 244 267 PS50157 Zinc finger IPR007087 268 295 PS50157 Zinc finger IPR007087 296 323 PS50157 Zinc finger IPR007087 324 351 PS50157 Zinc finger IPR007087 352 379 PS50157 Zinc finger IPR007087 380 407 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005764 627 606956 54.1 99.8 NP_942152 564 601856 52.2 98.3 NP_006376 577 601856 52.3 96.3 NP_001252529 503 601856 50.7 88.2 NP_001252528 555 601856 50.1 86.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0708 Download

>KIEE0708  1221 bp
ATGGCGGCGGCCGCGCTAAGGTTCCCCGTTCAGGGCACAGTGACTTTTGAAGACGTGGCT
GTGAAATTTACCCAGGAGGAATGGAATCTCCTTAGTGAGGCTCAGAGATGCCTGTACCGT
GATGTGACGCTGGAGAACCTGGCACTTATGTCCTCCCTGGGTTGTTGGTGTGGAGTGGAA
GATGAGGCGGCACCTTCTAAGCAGAGTATTTATATACAAAGAGAGACTCAGGTCAGGACT
CCTATGGCAGGTGTGTCTCCCAAGAAGGCCCACCCCTGTGAGATGTGTGGCCCGATCTTG
GGAGACATTTTGCATGTGGCAGATCATCAGGGAACACATCACAAGCAGAAACTGCACAGG
TGTGAGGCCTGGGGGAATAAATTGTATGACAGTGGAAACTTTCATCAGCACCAGAATGAG
CACATTGGAGAGAAACCCTACAGAGGGAGTGTTGAGGAGGCGTTGTTTGCGAAGAGGTGT
AAGTTGCATGTGTCAGGGGAGTCATCTGTCTTCAGTGAGAGTGGGAAAGACTTTTTGCTC
AGGTCAGGATTACTCCAGCAAGAGGCCACTCACACTGGGAAGTCAAACAGCAAAACTGAG
TGTGTGTCTCTGTTTCATGGGGGAAAAAGCCATTACAGCTGTGGAGGATGCATGAAACAT
TTTAGCACCAAAGATATACTCAGTCAGCACGAGAGACTGCTCCCTACAGAAGAACCTTCT
GTGTGGTGTGAATGTGGGAAATCCTCTAGCAAATATGACAGCTTCAGTAATCATCAAGGA
GTTCACACTAGAGAAAAACCTTATACGTGTGGGATATGTGGGAAATTATTTAACAGTAAG
TCCCACCTCCTTGTACACCAGAGAATTCACACTGGAGAGAAGCCATATGAGTGTGAGGTT
TGTCAGAAATTTTTTAGGCACAAGTACCACCTCATTGCACACCAGAGAGTTCACACTGGA
GAAAGGCCATATGAATGCAGTGATTGTGGGAAGTCATTTACCCACAGCTCTACATTCCGT
GTTCATAAGAGAGTTCACACTGGTCAGAAGCCTTATGAGTGCAGTGAATGTGGGAAATCT
TTTGCCGAAAGCTCCAGTCTCACTAAACACAGGAGAGTTCACACTGGAGAAAAGCCTTAC
GGGTGCAGTGAATGTGAAAAAAAATTTAGGCAAATCTCTTCACTTCGTCATCATCAGAGA
GTTCACAAAAGAAAGGGCTTA

ORF Protein

Cloned ORF protein sequence for pFN21AE0708 Download

>KIEE0708  407 aa
MAAAALRFPVQGTVTFEDVAVKFTQEEWNLLSEAQRCLYRDVTLENLALMSSLGCWCGVE
DEAAPSKQSIYIQRETQVRTPMAGVSPKKAHPCEMCGPILGDILHVADHQGTHHKQKLHR
CEAWGNKLYDSGNFHQHQNEHIGEKPYRGSVEEALFAKRCKLHVSGESSVFSESGKDFLL
RSGLLQQEATHTGKSNSKTECVSLFHGGKSHYSCGGCMKHFSTKDILSQHERLLPTEEPS
VWCECGKSSSKYDSFSNHQGVHTREKPYTCGICGKLFNSKSHLLVHQRIHTGEKPYECEV
CQKFFRHKYHLIAHQRVHTGERPYECSDCGKSFTHSSTFRVHKRVHTGQKPYECSECGKS
FAESSSLTKHRRVHTGEKPYGCSECEKKFRQISSLRHHQRVHKRKGL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0708 Download

>pFN21AE0708  5926 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGGCGGCCGCGCTAAGGTTCCCCGTTCAGGG
CACAGTGACTTTTGAAGACGTGGCTGTGAAATTTACCCAGGAGGAATGGAATCTCCTTAG
TGAGGCTCAGAGATGCCTGTACCGTGATGTGACGCTGGAGAACCTGGCACTTATGTCCTC
CCTGGGTTGTTGGTGTGGAGTGGAAGATGAGGCGGCACCTTCTAAGCAGAGTATTTATAT
ACAAAGAGAGACTCAGGTCAGGACTCCTATGGCAGGTGTGTCTCCCAAGAAGGCCCACCC
CTGTGAGATGTGTGGCCCGATCTTGGGAGACATTTTGCATGTGGCAGATCATCAGGGAAC
ACATCACAAGCAGAAACTGCACAGGTGTGAGGCCTGGGGGAATAAATTGTATGACAGTGG
AAACTTTCATCAGCACCAGAATGAGCACATTGGAGAGAAACCCTACAGAGGGAGTGTTGA
GGAGGCGTTGTTTGCGAAGAGGTGTAAGTTGCATGTGTCAGGGGAGTCATCTGTCTTCAG
TGAGAGTGGGAAAGACTTTTTGCTCAGGTCAGGATTACTCCAGCAAGAGGCCACTCACAC
TGGGAAGTCAAACAGCAAAACTGAGTGTGTGTCTCTGTTTCATGGGGGAAAAAGCCATTA
CAGCTGTGGAGGATGCATGAAACATTTTAGCACCAAAGATATACTCAGTCAGCACGAGAG
ACTGCTCCCTACAGAAGAACCTTCTGTGTGGTGTGAATGTGGGAAATCCTCTAGCAAATA
TGACAGCTTCAGTAATCATCAAGGAGTTCACACTAGAGAAAAACCTTATACGTGTGGGAT
ATGTGGGAAATTATTTAACAGTAAGTCCCACCTCCTTGTACACCAGAGAATTCACACTGG
AGAGAAGCCATATGAGTGTGAGGTTTGTCAGAAATTTTTTAGGCACAAGTACCACCTCAT
TGCACACCAGAGAGTTCACACTGGAGAAAGGCCATATGAATGCAGTGATTGTGGGAAGTC
ATTTACCCACAGCTCTACATTCCGTGTTCATAAGAGAGTTCACACTGGTCAGAAGCCTTA
TGAGTGCAGTGAATGTGGGAAATCTTTTGCCGAAAGCTCCAGTCTCACTAAACACAGGAG
AGTTCACACTGGAGAAAAGCCTTACGGGTGCAGTGAATGTGAAAAAAAATTTAGGCAAAT
CTCTTCACTTCGTCATCATCAGAGAGTTCACAAAAGAAAGGGCTTAGTTTAAACGAATTC
GGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTG
CTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCAT
AACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAA
ACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCT
TTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTT
ATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAA
TGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATA
GCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTA
ATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATG
CTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT
CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA
AAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGC
GGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAA
GTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGC
CGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT
ACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACT
GCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCAC
AACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATA
CCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTA
TTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG
GATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGAT
AAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGT
AAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGA
AATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACC
GACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACC
GTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGT
TTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACC
TGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGC
CCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACT
TATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTG
CTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTA
TCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCA
AACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACG
AAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCC
TTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAAC
CATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTT
GCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGT
TTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGT
ACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAAC
CGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT