GP5 ORF clone pFN21AE0070

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Halotag ORF Clone pFN21AE0070

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Clone info.

Species

human

Clone Name

pFN21AE0070 Sequence (with vector) Restriction Map

Product ID

FHC10743

Flexi Clone PID

FXC10743

ORF Sequence

DNA sequence (1680 bp)
Protein sequence (560 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527338]

Gene

KIEE0070

Symbol

GP5

Alias : CD42d, GPV

Description

glycoprotein V (platelet)

Original Clone ID

oc00770

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1680 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 560 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3307.1 2.3e-141 100.0 GP5 CCDS3306.1 9.1e-31 34.2 LRRC15 CCDS46984.1 9.2e-31 34.2 LRRC15 CCDS33920.1 1.2e-16 32.7 CPN2 CCDS75111.1 2.9e-14 27.0 SLIT2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan NULL 172 185 PR00019 NULL NULL 241 254 PR00019 NULL HMMPfam IPR001611 99 118 PF00560 Leucine-rich repeat IPR001611 171 190 PF00560 Leucine-rich repeat HMMSmart IPR003591 73 96 SM00369 Leucine-rich repeat IPR003591 97 120 SM00369 Leucine-rich repeat IPR003591 121 144 SM00369 Leucine-rich repeat IPR003591 145 168 SM00369 Leucine-rich repeat IPR003591 169 192 SM00369 Leucine-rich repeat IPR003591 194 216 SM00369 Leucine-rich repeat IPR003591 217 240 SM00369 Leucine-rich repeat IPR003591 241 264 SM00369 Leucine-rich repeat IPR003591 266 288 SM00369 Leucine-rich repeat IPR003591 289 312 SM00369 Leucine-rich repeat IPR003591 313 337 SM00369 Leucine-rich repeat IPR003591 338 361 SM00369 Leucine-rich repeat IPR003591 362 385 SM00369 Leucine-rich repeat IPR003591 386 409 SM00369 Leucine-rich repeat IPR000483 421 473 SM00082 Cysteine-rich flanking region ProfileScan IPR001611 99 120 PS51450 Leucine-rich repeat IPR001611 123 144 PS51450 Leucine-rich repeat IPR001611 147 168 PS51450 Leucine-rich repeat IPR001611 171 193 PS51450 Leucine-rich repeat IPR001611 195 216 PS51450 Leucine-rich repeat IPR001611 219 240 PS51450 Leucine-rich repeat IPR001611 243 264 PS51450 Leucine-rich repeat IPR001611 267 288 PS51450 Leucine-rich repeat IPR001611 291 312 PS51450 Leucine-rich repeat IPR001611 340 361 PS51450 Leucine-rich repeat IPR001611 364 385 PS51450 Leucine-rich repeat IPR001611 388 409 PS51450 Leucine-rich repeat
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 4 GTLLCAVLGLLRAQPFPCPPACK 26 SECONDARY 23 2 525 YFLLLAVQAMITVIIVFAMIKIG 547 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004479 560 173511 100.0 100.0 XP_005269337 545 603104 32.7 85.0 NP_001278917 545 603104 32.7 85.0 NP_001073982 545 603104 32.7 85.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0070 Download

>KIEE0070  1680 bp
ATGCTGAGGGGGACTCTACTGTGCGCGGTGCTCGGGCTTCTGCGCGCCCAGCCCTTCCCC
TGTCCGCCAGCTTGCAAGTGTGTCTTCCGGGACGCCGCGCAGTGCTCGGGGGGCGACGTG
GCGCGCATCTCCGCGCTAGGCCTGCCCACCAACCTCACGCACATCCTGCTCTTCGGAATG
GGCCGCGGCGTCCTGCAGAGCCAGAGCTTCAGCGGCATGACCGTCCTGCAGCGCCTCATG
ATCTCCGACAGCCACATTTCCGCCGTTGCCCCCGGCACCTTCAGTGACCTGATAAAACTG
AAAACCCTGAGGCTGTCGCGCAACAAAATCACGCATCTTCCAGGTGCGCTGCTGGATAAG
ATGGTGCTCCTGGAGCAGTTGTTTTTGGACCACAATGCGCTAAGGGGCATTGACCAAAAC
ATGTTTCAGAAACTGGTTAACCTGCAGGAGCTCGCTCTGAACCAGAATCAGCTCGATTTC
CTTCCTGCCAGTCTCTTCACGAATCTGGAGAACCTGAAGTTGTTGGATTTATCGGGAAAC
AACCTGACCCACCTGCCCAAGGGGTTGCTTGGAGCACAGGCTAAGCTCGAGAGACTTCTG
CTCCACTCGAACCGCCTTGTGTCTCTGGATTCGGGGCTGTTGAACAGCCTGGGCGCCCTG
ACGGAGCTGCAGTTCCACCGAAATCACATCCGTTCCATCGCACCCGGGGCCTTCGACCGG
CTCCCAAACCTCAGTTCTTTGACGCTTTCGAGAAACCACCTTGCGTTTCTCCCCTCTGCG
CTCTTTCTTCATTCGCACAATCTGACTCTGTTGACTCTGTTCGAGAACCCGCTGGCAGAG
CTCCCGGGGGTGCTCTTCGGGGAGATGGGGGGCCTGCAGGAGCTGTGGCTGAACCGCACC
CAGCTGCGCACCCTGCCCGCCGCCGCCTTCCGCAACCTGAGCCGCCTGCGGTACTTAGGG
GTGACTCTGAGCCCGCGGCTGAGCGCGCTTCCGCAGGGCGCCTTCCAGGGCCTTGGCGAG
CTCCAGGTGCTCGCCCTGCACTCCAACGGCCTGACCGCCCTCCCCGACGGCTTGCTGCGC
GGCCTCGGCAAGCTGCGCCAGGTGTCCCTGCGCCGCAACAGGCTGCGCGCCCTGCCCCGT
GCCCTCTTCCGCAATCTCAGCAGCCTGGAGAGCGTCCAGCTCGACCACAACCAGCTGGAG
ACCCTGCCTGGCGACGTGTTTGGGGCTCTGCCCCGGCTGACGGAGGTCCTGTTGGGGCAC
AACTCCTGGCGCTGCGACTGTGGCCTGGGGCCCTTCCTGGGGTGGCTGCGGCAGCACCTA
GGCCTCGTGGGCGGGGAAGAGCCCCCACGGTGCGCAGGCCCTGGGGCGCACGCCGGCCTG
CCGCTCTGGGCCCTGCCGGGGGGTGACGCGGAGTGCCCGGGCCCCCGGGGCCCGCCTCCC
CGCCCCGCTGCGGACAGCTCCTCGGAAGCCCCTGTCCACCCAGCCTTGGCTCCCAACAGC
TCAGAACCCTGGGTGTGGGCCCAGCCGGTGACCACGGGCAAAGGTCAAGATCATAGTCCG
TTCTGGGGGTTTTATTTTCTGCTTTTAGCTGTTCAGGCCATGATCACCGTGATCATCGTG
TTTGCTATGATTAAAATTGGCCAACTCTTTCGAAAATTAATCAGAGAGAGAGCCCTTGGG

ORF Protein

Cloned ORF protein sequence for pFN21AE0070 Download

>KIEE0070  560 aa
MLRGTLLCAVLGLLRAQPFPCPPACKCVFRDAAQCSGGDVARISALGLPTNLTHILLFGM
GRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDK
MVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGN
NLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDR
LPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRT
QLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLR
GLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGH
NSWRCDCGLGPFLGWLRQHLGLVGGEEPPRCAGPGAHAGLPLWALPGGDAECPGPRGPPP
RPAADSSSEAPVHPALAPNSSEPWVWAQPVTTGKGQDHSPFWGFYFLLLAVQAMITVIIV
FAMIKIGQLFRKLIRERALG

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0070 Download

>pFN21AE0070  6385 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTGAGGGGGACTCTACTGTGCGCGGTGCTCGG
GCTTCTGCGCGCCCAGCCCTTCCCCTGTCCGCCAGCTTGCAAGTGTGTCTTCCGGGACGC
CGCGCAGTGCTCGGGGGGCGACGTGGCGCGCATCTCCGCGCTAGGCCTGCCCACCAACCT
CACGCACATCCTGCTCTTCGGAATGGGCCGCGGCGTCCTGCAGAGCCAGAGCTTCAGCGG
CATGACCGTCCTGCAGCGCCTCATGATCTCCGACAGCCACATTTCCGCCGTTGCCCCCGG
CACCTTCAGTGACCTGATAAAACTGAAAACCCTGAGGCTGTCGCGCAACAAAATCACGCA
TCTTCCAGGTGCGCTGCTGGATAAGATGGTGCTCCTGGAGCAGTTGTTTTTGGACCACAA
TGCGCTAAGGGGCATTGACCAAAACATGTTTCAGAAACTGGTTAACCTGCAGGAGCTCGC
TCTGAACCAGAATCAGCTCGATTTCCTTCCTGCCAGTCTCTTCACGAATCTGGAGAACCT
GAAGTTGTTGGATTTATCGGGAAACAACCTGACCCACCTGCCCAAGGGGTTGCTTGGAGC
ACAGGCTAAGCTCGAGAGACTTCTGCTCCACTCGAACCGCCTTGTGTCTCTGGATTCGGG
GCTGTTGAACAGCCTGGGCGCCCTGACGGAGCTGCAGTTCCACCGAAATCACATCCGTTC
CATCGCACCCGGGGCCTTCGACCGGCTCCCAAACCTCAGTTCTTTGACGCTTTCGAGAAA
CCACCTTGCGTTTCTCCCCTCTGCGCTCTTTCTTCATTCGCACAATCTGACTCTGTTGAC
TCTGTTCGAGAACCCGCTGGCAGAGCTCCCGGGGGTGCTCTTCGGGGAGATGGGGGGCCT
GCAGGAGCTGTGGCTGAACCGCACCCAGCTGCGCACCCTGCCCGCCGCCGCCTTCCGCAA
CCTGAGCCGCCTGCGGTACTTAGGGGTGACTCTGAGCCCGCGGCTGAGCGCGCTTCCGCA
GGGCGCCTTCCAGGGCCTTGGCGAGCTCCAGGTGCTCGCCCTGCACTCCAACGGCCTGAC
CGCCCTCCCCGACGGCTTGCTGCGCGGCCTCGGCAAGCTGCGCCAGGTGTCCCTGCGCCG
CAACAGGCTGCGCGCCCTGCCCCGTGCCCTCTTCCGCAATCTCAGCAGCCTGGAGAGCGT
CCAGCTCGACCACAACCAGCTGGAGACCCTGCCTGGCGACGTGTTTGGGGCTCTGCCCCG
GCTGACGGAGGTCCTGTTGGGGCACAACTCCTGGCGCTGCGACTGTGGCCTGGGGCCCTT
CCTGGGGTGGCTGCGGCAGCACCTAGGCCTCGTGGGCGGGGAAGAGCCCCCACGGTGCGC
AGGCCCTGGGGCGCACGCCGGCCTGCCGCTCTGGGCCCTGCCGGGGGGTGACGCGGAGTG
CCCGGGCCCCCGGGGCCCGCCTCCCCGCCCCGCTGCGGACAGCTCCTCGGAAGCCCCTGT
CCACCCAGCCTTGGCTCCCAACAGCTCAGAACCCTGGGTGTGGGCCCAGCCGGTGACCAC
GGGCAAAGGTCAAGATCATAGTCCGTTCTGGGGGTTTTATTTTCTGCTTTTAGCTGTTCA
GGCCATGATCACCGTGATCATCGTGTTTGCTATGATTAAAATTGGCCAACTCTTTCGAAA
ATTAATCAGAGAGAGAGCCCTTGGGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT