TRIM68 ORF clone pFN21AE0026

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE0026

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Clone info.

Species

human

Clone Name

pFN21AE0026 Sequence (with vector) Restriction Map

Product ID

FHC10707

Flexi Clone PID

FXC10707

ORF Sequence

DNA sequence (1455 bp)
Protein sequence (485 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527317]

Gene

KIEE0026

Symbol

TRIM68

Alias : GC109, RNF137, SS-56, SS56

Description

tripartite motif containing 68, transcript variant 1

Original Clone ID

oc00726

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1455 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 485 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31356.1 2.5e-139 100.0 TRIM68 CCDS34378.1 6e-43 38.1 TRIM39 CCDS3808.1 1.4e-31 34.6 TRIM60 CCDS1571.1 9.3e-31 36.6 TRIM17 CCDS31048.1 1.2e-30 42.7 TRIM11 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 301 318 PR01407 Butyrophylin-like IPR003879 318 335 PR01407 Butyrophylin-like IPR003879 340 364 PR01407 Butyrophylin-like IPR003879 370 383 PR01407 Butyrophylin-like IPR003879 414 438 PR01407 Butyrophylin-like IPR003879 446 464 PR01407 Butyrophylin-like HMMPfam IPR018957 16 60 PF00097 Zinc finger IPR000315 96 134 PF00643 Zinc finger IPR003877 355 466 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 16 60 SM00184 Zinc finger IPR000315 93 134 SM00336 Zinc finger IPR006574 302 354 SM00589 SPRY-associated IPR018355 355 482 SM00449 SPla/RYanodine receptor subgroup ProfileScan IPR001841 16 61 PS50089 Zinc finger IPR000315 93 134 PS50119 Zinc finger IPR001870 285 481 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_060543 485 613184 100.0 100.0 NP_742013 488 605700 38.1 97.7 XP_016857901 467 607868 42.7 99.6 XP_011542512 477 606123 36.6 99.2 NP_057186 477 606123 36.6 99.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0026 Download

>KIEE0026  1455 bp
ATGGATCCCACAGCCTTGGTGGAAGCCATTGTGGAAGAAGTGGCCTGTCCCATCTGTATG
ACCTTCCTGAGGGAGCCCATGAGCATTGACTGTGGCCACAGCTTCTGCCACAGCTGTCTC
TCTGGACTCTGGGAGATCCCAGGAGAATCCCAGAACTGGGGTTACACCTGTCCCCTCTGT
CGAGCTCCTGTCCAGCCAAGGAACCTGCGGCCTAATTGGCAGCTGGCCAATGTTGTAGAA
AAAGTCCGTCTGCTAAGGCTACATCCAGGAATGGGGCTGAAGGGTGACCTGTGTGAGCGC
CATGGGGAAAAGCTGAAGATGTTCTGCAAAGAGGATGTCTTGATAATGTGTGAGGCCTGC
AGCCAGTCCCCAGAGCATGAGGCCCACAGTGTTGTGCCAATGGAGGATGTTGCCTGGGAG
TACAAGTGGGAACTTCATGAGGCCCTCGAACATCTGAAGAAAGAGCAAGAAGAGGCCTGG
AAGCTTGAAGTTGGTGAAAGGAAACGAACTGCCACCTGGAAGATACAGGTGGAAACCCGA
AAACAGAGTATTGTATGGGAGTTTGAAAAATACCAGCGATTACTAGAGAAAAAGCAGCCA
CCACATCGGCAGCTGGGGGCAGAGGTAGCAGCAGCTCTGGCCAGCCTACAGCGGGAGGCA
GCGGAGACCATGCAGAAACTGGAGTTGAACCATAGCGAGCTCATCCAGCAGAGCCAGGTC
CTGTGGAGGATGATTGCAGAGTTGAAAGAGAGGTCGCAGAGGCCTGTCCGCTGGATGTTG
CAGGATATTCAGGAAGTGTTAAACAGGAGCAAATCTTGGAGCTTGCAGCAGCCAGAACCA
ATCTCCCTGGAGTTGAAGACAGATTGCCGTGTACTGGGGCTAAGAGAGATCCTGAAGACT
TATGCAGCTGATGTGCGCTTGGATCCAGATACTGCTTACTCCCGTCTCATCGTGTCTGAG
GACAGAAAACGTGTGCACTATGGAGACACCAACCAGAAACTGCCAGACAATCCTGAGAGA
TTTTACCGCTATAATATCGTCCTGGGAAGCCAGTGCATCTCCTCAGGCCGGCACTACTGG
GAGGTGGAGGTGGGAGACAGGTCTGAGTGGGGCCTGGGAGTATGTAAGCAAAATGTAGAC
CGGAAGGAGGTGGTCTACTTATCCCCCCACTATGGATTCTGGGTGATAAGGCTGAGGAAG
GGAAATGAGTACCGAGCAGGCACCGATGAGTACCCAATCCTGTCCTTGCCGGTCCCTCCT
CGCCGGGTGGGAATCTTCGTGGATTATGAGGCCCATGACATTTCTTTCTACAATGTGACT
GACTGTGGCTCCCACATCTTCACTTTCCCCCGCTATCCCTTCCCTGGGCGCCTCCTGCCC
TATTTTAGTCCTTGCTACAGCATTGGAACCAACAACACTGCTCCTCTGGCCATCTGCTCC
CTGGATGGGGAGGAC

ORF Protein

Cloned ORF protein sequence for pFN21AE0026 Download

>KIEE0026  485 aa
MDPTALVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLC
RAPVQPRNLRPNWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEAC
SQSPEHEAHSVVPMEDVAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKIQVETR
KQSIVWEFEKYQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKLELNHSELIQQSQV
LWRMIAELKERSQRPVRWMLQDIQEVLNRSKSWSLQQPEPISLELKTDCRVLGLREILKT
YAADVRLDPDTAYSRLIVSEDRKRVHYGDTNQKLPDNPERFYRYNIVLGSQCISSGRHYW
EVEVGDRSEWGLGVCKQNVDRKEVVYLSPHYGFWVIRLRKGNEYRAGTDEYPILSLPVPP
RRVGIFVDYEAHDISFYNVTDCGSHIFTFPRYPFPGRLLPYFSPCYSIGTNNTAPLAICS
LDGED

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0026 Download

>pFN21AE0026  6160 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGATCCCACAGCCTTGGTGGAAGCCATTGTGGA
AGAAGTGGCCTGTCCCATCTGTATGACCTTCCTGAGGGAGCCCATGAGCATTGACTGTGG
CCACAGCTTCTGCCACAGCTGTCTCTCTGGACTCTGGGAGATCCCAGGAGAATCCCAGAA
CTGGGGTTACACCTGTCCCCTCTGTCGAGCTCCTGTCCAGCCAAGGAACCTGCGGCCTAA
TTGGCAGCTGGCCAATGTTGTAGAAAAAGTCCGTCTGCTAAGGCTACATCCAGGAATGGG
GCTGAAGGGTGACCTGTGTGAGCGCCATGGGGAAAAGCTGAAGATGTTCTGCAAAGAGGA
TGTCTTGATAATGTGTGAGGCCTGCAGCCAGTCCCCAGAGCATGAGGCCCACAGTGTTGT
GCCAATGGAGGATGTTGCCTGGGAGTACAAGTGGGAACTTCATGAGGCCCTCGAACATCT
GAAGAAAGAGCAAGAAGAGGCCTGGAAGCTTGAAGTTGGTGAAAGGAAACGAACTGCCAC
CTGGAAGATACAGGTGGAAACCCGAAAACAGAGTATTGTATGGGAGTTTGAAAAATACCA
GCGATTACTAGAGAAAAAGCAGCCACCACATCGGCAGCTGGGGGCAGAGGTAGCAGCAGC
TCTGGCCAGCCTACAGCGGGAGGCAGCGGAGACCATGCAGAAACTGGAGTTGAACCATAG
CGAGCTCATCCAGCAGAGCCAGGTCCTGTGGAGGATGATTGCAGAGTTGAAAGAGAGGTC
GCAGAGGCCTGTCCGCTGGATGTTGCAGGATATTCAGGAAGTGTTAAACAGGAGCAAATC
TTGGAGCTTGCAGCAGCCAGAACCAATCTCCCTGGAGTTGAAGACAGATTGCCGTGTACT
GGGGCTAAGAGAGATCCTGAAGACTTATGCAGCTGATGTGCGCTTGGATCCAGATACTGC
TTACTCCCGTCTCATCGTGTCTGAGGACAGAAAACGTGTGCACTATGGAGACACCAACCA
GAAACTGCCAGACAATCCTGAGAGATTTTACCGCTATAATATCGTCCTGGGAAGCCAGTG
CATCTCCTCAGGCCGGCACTACTGGGAGGTGGAGGTGGGAGACAGGTCTGAGTGGGGCCT
GGGAGTATGTAAGCAAAATGTAGACCGGAAGGAGGTGGTCTACTTATCCCCCCACTATGG
ATTCTGGGTGATAAGGCTGAGGAAGGGAAATGAGTACCGAGCAGGCACCGATGAGTACCC
AATCCTGTCCTTGCCGGTCCCTCCTCGCCGGGTGGGAATCTTCGTGGATTATGAGGCCCA
TGACATTTCTTTCTACAATGTGACTGACTGTGGCTCCCACATCTTCACTTTCCCCCGCTA
TCCCTTCCCTGGGCGCCTCCTGCCCTATTTTAGTCCTTGCTACAGCATTGGAACCAACAA
CACTGCTCCTCTGGCCATCTGCTCCCTGGATGGGGAGGACGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT