TCEB3CL ORF clone pFN21AB9877

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB9877

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Clone info.

Species

human

Clone Name

pFN21AB9877 Sequence (with vector) Restriction Map

Product ID

FHC03378

Flexi Clone PID

FXC03378

ORF Sequence

DNA sequence (1638 bp)
Protein sequence (546 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464734]

Gene

KIBB9877

Symbol

TCEB3CL

Description

transcription elongation factor B polypeptide 3C-like

Original Clone ID

cp00446

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1638 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 546 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS59316.1 1.2e-105 99.6 TCEB3CL2 CCDS11931.1 1.4e-105 99.6 TCEB3C CCDS11932.1 4.4e-37 58.8 TCEB3B CCDS239.2 1.2e-20 38.8 TCEB3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR017923 29 77 PF08711 Transcription factor IIS IPR010684 352 451 PF06881 RNA polymerase II transcription factor SIII HMMSmart IPR003617 8 79 SM00509 Transcription elongation factor ProfileScan IPR017923 5 80 PS51319 Transcription factor IIS
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003189 798 600786 38.8 85.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9877 Download

>KIBB9877  1638 bp
ATGGCGGCAGGGTCCACTACGCTGCGCGCAGTGGGGAAGCTGCAGGTGCGTCTGGCCACT
AAGACGGAGCCGAAAAAGCTAGAGAAATATTTGCAGAAACTCTCCGCCTTGCCCATGACC
GCAGACATCCTGGCGGAGACTGGAATCAGAAAGACGGTGAAGCGCCTGCGGAAGCACCAG
CACGTGGGCGACTTTGCCAGAGACTTAGCGGCCCGGTGGAAGAAGCTGGTGCTCGTGGAC
CGAAACACCGGGCCTGACCCGCAGGACCCTGAGGAGAGCGCTTCCCGACAGCGCTTCGGG
GAGGCTCTTCAGGAGCGGGAAAAGGCCTGGGGCTTCCCAGAAAACGCGACGGCCCCCAGG
AGCCCATCTCACAGCCCTGAGCACAGACGGACAGCACGCAGAACACCTCCGGGGCAACAG
AGACCTCACCCGAGGTCTCCCAGTCGCGAGCCCAGAGCCGAGAGAAAGCGCCCCAGAATG
GCCCCAGCTGATTCCGGCCCCCATCGGGACCCTCCAACGCGCACCGCTCCCCTCCCGATG
CCCGAGGGCCCTGAGCCCGCTGTGCCCGGGGAGCAACCCGGAAGAGGCCACGCTCACGCC
GCTCAGGGCGGGCCTCTGCTGGGTCAAGGCTGCCAGGGCCAACCCCAGGGGGAAGCGGTG
GGGAGCCACAGCAAGGGGCACAAATCGTCCCGCGGGGCTTCGGCTCAGAAATCGCCTCCT
GTCCAGGAAAGCCAGTCAGAGAGGCTGCAGGCGGCCGGCGCTGATTCCGCCGGGCCGAAA
ACGGTGCCCAGCCATGTCTTCTCGGAGCTCTGGGACCCCTCAGAGGCCTGGATGCAGGCC
AACTACGATCTGCTGTCCGCTTTTGAGGCCATGACCTCCCAGGCAAACCCAGAAGCACTC
TCCGCGCCAACGCTCCAGGAGGAAGCTGCTTTCCCTGGACGCAGAGTGAACGCTAAGATG
CCGGTGTACTCGGGCTCCAGGCCTGCCTGCCAGCTCCAGGTGCCGACGCTGCGCCAGCAG
TGCCTCCGGGTGCCTAGGAACAATCCGGACGCCCTCGGCGACGTGGAAGGGGTCCCCTAC
TCGGTTCTTGAACCCGTTCTGGAAGGGTGGACGCCCGATCAGCCGTACCGCACAGAGAAA
GACAATGCCGCACTCGCTCGAGAGACAGATGAATTATGGAGGATTCATTGCCTCCAGGAC
TTCAAGGAAGAAAAGCCACAGGAGCACGAGTCTTGGCGGGAGCTGTACCTGCGGCTTCGG
GACGCCCGAGAGCAGCGGCTGCGAGTAGTGACCACGAAAATCCGATCCGCACGTGAAAAC
AAACCCAGCGGCCGACAGACAAAGATGATCTGTTTCAACTCTGTGGCCAAGACGCCTTAT
GATGCTTCCAGGAGGCAAGAGAAGTCTGCAGGAGCCGCTGACCCCGGAAATGGAGAGATG
GAGCCAGCCCCCAAGCCCGCAGGAAGCAGCCAGGCTCCCTCCGGCCTCGGGGACGGCGAC
GGCGGCAGCGTGAGCGGCGGCGGCAGCAGCAACCGGCACGCGGCGCCCGCGGACAAAACC
CGAAAACAGGCTGCCAAGAAAGTGGCCCCGCTGATGGCCAAGGCAATTCGAGACTACAAG
GGAAGATTCTCCCGACGA

ORF Protein

Cloned ORF protein sequence for pFN21AB9877 Download

>KIBB9877  546 aa
MAAGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ
HVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPR
SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM
PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPP
VQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEAL
SAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPDALGDVEGVPY
SVLEPVLEGWTPDQPYRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESWRELYLRLR
DAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYDASRRQEKSAGAADPGNGEM
EPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKVAPLMAKAIRDYK
GRFSRR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9877 Download

>pFN21AB9877  6343 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGGCAGGGTCCACTACGCTGCGCGCAGTGGG
GAAGCTGCAGGTGCGTCTGGCCACTAAGACGGAGCCGAAAAAGCTAGAGAAATATTTGCA
GAAACTCTCCGCCTTGCCCATGACCGCAGACATCCTGGCGGAGACTGGAATCAGAAAGAC
GGTGAAGCGCCTGCGGAAGCACCAGCACGTGGGCGACTTTGCCAGAGACTTAGCGGCCCG
GTGGAAGAAGCTGGTGCTCGTGGACCGAAACACCGGGCCTGACCCGCAGGACCCTGAGGA
GAGCGCTTCCCGACAGCGCTTCGGGGAGGCTCTTCAGGAGCGGGAAAAGGCCTGGGGCTT
CCCAGAAAACGCGACGGCCCCCAGGAGCCCATCTCACAGCCCTGAGCACAGACGGACAGC
ACGCAGAACACCTCCGGGGCAACAGAGACCTCACCCGAGGTCTCCCAGTCGCGAGCCCAG
AGCCGAGAGAAAGCGCCCCAGAATGGCCCCAGCTGATTCCGGCCCCCATCGGGACCCTCC
AACGCGCACCGCTCCCCTCCCGATGCCCGAGGGCCCTGAGCCCGCTGTGCCCGGGGAGCA
ACCCGGAAGAGGCCACGCTCACGCCGCTCAGGGCGGGCCTCTGCTGGGTCAAGGCTGCCA
GGGCCAACCCCAGGGGGAAGCGGTGGGGAGCCACAGCAAGGGGCACAAATCGTCCCGCGG
GGCTTCGGCTCAGAAATCGCCTCCTGTCCAGGAAAGCCAGTCAGAGAGGCTGCAGGCGGC
CGGCGCTGATTCCGCCGGGCCGAAAACGGTGCCCAGCCATGTCTTCTCGGAGCTCTGGGA
CCCCTCAGAGGCCTGGATGCAGGCCAACTACGATCTGCTGTCCGCTTTTGAGGCCATGAC
CTCCCAGGCAAACCCAGAAGCACTCTCCGCGCCAACGCTCCAGGAGGAAGCTGCTTTCCC
TGGACGCAGAGTGAACGCTAAGATGCCGGTGTACTCGGGCTCCAGGCCTGCCTGCCAGCT
CCAGGTGCCGACGCTGCGCCAGCAGTGCCTCCGGGTGCCTAGGAACAATCCGGACGCCCT
CGGCGACGTGGAAGGGGTCCCCTACTCGGTTCTTGAACCCGTTCTGGAAGGGTGGACGCC
CGATCAGCCGTACCGCACAGAGAAAGACAATGCCGCACTCGCTCGAGAGACAGATGAATT
ATGGAGGATTCATTGCCTCCAGGACTTCAAGGAAGAAAAGCCACAGGAGCACGAGTCTTG
GCGGGAGCTGTACCTGCGGCTTCGGGACGCCCGAGAGCAGCGGCTGCGAGTAGTGACCAC
GAAAATCCGATCCGCACGTGAAAACAAACCCAGCGGCCGACAGACAAAGATGATCTGTTT
CAACTCTGTGGCCAAGACGCCTTATGATGCTTCCAGGAGGCAAGAGAAGTCTGCAGGAGC
CGCTGACCCCGGAAATGGAGAGATGGAGCCAGCCCCCAAGCCCGCAGGAAGCAGCCAGGC
TCCCTCCGGCCTCGGGGACGGCGACGGCGGCAGCGTGAGCGGCGGCGGCAGCAGCAACCG
GCACGCGGCGCCCGCGGACAAAACCCGAAAACAGGCTGCCAAGAAAGTGGCCCCGCTGAT
GGCCAAGGCAATTCGAGACTACAAGGGAAGATTCTCCCGACGAGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT