CBX2 ORF clone pFN21AB9744

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB9744

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Clone info.

Species

human

Clone Name

pFN21AB9744 Sequence (with vector) Restriction Map

Product ID

FHC03278

Flexi Clone PID

FXC03278

ORF Sequence

DNA sequence (1596 bp)
Protein sequence (532 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463499]

Gene

KIBB9744

Symbol

CBX2

Alias : CDCA6, M33, SRXY5

Description

chromobox homolog 2, transcript variant 1

Original Clone ID

cp00327

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1596 bp
Restriction map A Restriction map B

Features of the protein sequence

Description

Length: 532 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32757.1 6.2e-108 100.0 CBX2 CCDS11764.1 6.5e-16 100.0 CBX2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR023780 14 61 PF00385 Chromo domain HMMSmart IPR000953 11 63 SM00298 Chromo domain/shadow ProfileScan IPR000953 12 70 PS50013 Chromo domain/shadow
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005180 532 602770,613080 100.0 100.0 XP_011523684 586 602770,613080 100.0 99.6 XP_011523685 501 602770,613080 100.0 83.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9744 Download

>KIBB9744  1596 bp
ATGGAGGAGCTGAGCAGCGTGGGCGAGCAGGTCTTCGCCGCCGAGTGCATCCTGAGCAAG
CGGCTCCGCAAGGGCAAGCTGGAGTACCTGGTCAAGTGGCGCGGCTGGTCCTCCAAACAT
AACAGCTGGGAGCCGGAGGAGAACATCCTGGACCCGAGGCTGCTCCTGGCCTTCCAGAAG
AAGGAACATGAGAAGGAGGTGCAGAACCGGAAGAGAGGCAAGAGGCCGAGAGGCCGGCCA
AGGAAGCTCACTGCCATGTCCTCCTGCAGCCGGCGCTCCAAGCTCAAGGAACCCGATGCT
CCCTCCAAATCCAAGTCCAGCAGTTCCTCCTCTTCCTCCACGTCATCCTCCTCTTCCTCA
GATGAAGAGGATGACAGTGACTTAGATGCTAAGAGGGGTCCCCGGGGCCGCGAGACCCAC
CCAGTGCCGCAGAAGAAGGCCCAGATCCTGGTGGCCAAACCCGAGCTGAAGGATCCCATC
CGGAAGAAGCGGGGACGAAAGCCCCTGCCCCCAGAGCAAAAGGCAACCCGAAGACCCGTG
AGCCTGGCCAAGGTGCTGAAGACCGCCCGGAAGGATCTGGGGGCCCCGGCCAGCAAGCTG
CCCCCTCCACTCAGCGCCCCCGTTGCAGGCCTGGCAGCTCTGAAGGCCCACGCCAAGGAG
GCCTGTGGCGGCCCCAGTGCCATGGCCACCCCAGAGAACCTGGCCAGCCTAATGAAGGGC
ATGGCCAGTAGCCCCGGCCGGGGTGGCATCAGCTGGCAGAGCTCCATCGTGCACTACATG
AACCGGATGACCCAGAGCCAGGCCCAGGCTGCCAGCAGGTTGGCGCTGAAGGCCCAGGCC
ACCAACAAGTGCGGCCTCGGGCTGGACCTGAAGGTGAGGACGCAGAAAGGGGAGCTGGGA
ATGAGCCCTCCAGGAAGCAAAATCCCGAAGGCCCCCAGCGGTGGGGCTGTGGAGCAGAAA
GTGGGGAACACAGGGGGCCCCCCGCACACCCATGGTGCCAGCAGGGTGCCTGCTGGGTGC
CCAGGCCCCCAGCCAGCACCCACCCAGGAGCTGAGCCTCCAGGTCTTGGACTTGCAGAGT
GTCAAGAATGGCATGCCCGGGGTGGGTCTCCTTGCCCGCCACGCCACCGCCACCAAGGGT
GTCCCGGCCACCAACCCAGCCCCTGGGAAGGGCACTGGGAGTGGCCTCATTGGGGCCAGC
GGGGCCACCATGCCCACCGACACAAGCAAAAGTGAGAAGCTAGCTTCCAGAGCAGTGGCG
CCACCCACCCCTGCCAGCAAGAGGGACTGTGTCAAGGGCAGTGCTACCCCCAGTGGGCAG
GAGAGCCGCACAGCCCCCGGAGAAGCCCGCAAGGCGGCCACACTGCCAGAGATGAGCGCA
GGTGAGGAGAGTAGCAGCTCGGACTCCGACCCCGACTCCGCCTCGCCGCCCAGCACTGGA
CAGAACCCGTCAGTGTCCGTTCAGACCAGCCAGGACTGGAAGCCCACCCGCAGCCTCATC
GAGCACGTATTTGTCACCGACGTCACTGCCAACCTCATCACCGTCACAGTGAAGGAGTCT
CCCACCAGCGTGGGCTTCTTCAACCTGAGGCATTAC

ORF Protein

Cloned ORF protein sequence for pFN21AB9744 Download

>KIBB9744  532 aa
MEELSSVGEQVFAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQK
KEHEKEVQNRKRGKRPRGRPRKLTAMSSCSRRSKLKEPDAPSKSKSSSSSSSSTSSSSSS
DEEDDSDLDAKRGPRGRETHPVPQKKAQILVAKPELKDPIRKKRGRKPLPPEQKATRRPV
SLAKVLKTARKDLGAPASKLPPPLSAPVAGLAALKAHAKEACGGPSAMATPENLASLMKG
MASSPGRGGISWQSSIVHYMNRMTQSQAQAASRLALKAQATNKCGLGLDLKVRTQKGELG
MSPPGSKIPKAPSGGAVEQKVGNTGGPPHTHGASRVPAGCPGPQPAPTQELSLQVLDLQS
VKNGMPGVGLLARHATATKGVPATNPAPGKGTGSGLIGASGATMPTDTSKSEKLASRAVA
PPTPASKRDCVKGSATPSGQESRTAPGEARKAATLPEMSAGEESSSSDSDPDSASPPSTG
QNPSVSVQTSQDWKPTRSLIEHVFVTDVTANLITVTVKESPTSVGFFNLRHY

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9744 Download

>pFN21AB9744  6301 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGGAGCTGAGCAGCGTGGGCGAGCAGGTCTT
CGCCGCCGAGTGCATCCTGAGCAAGCGGCTCCGCAAGGGCAAGCTGGAGTACCTGGTCAA
GTGGCGCGGCTGGTCCTCCAAACATAACAGCTGGGAGCCGGAGGAGAACATCCTGGACCC
GAGGCTGCTCCTGGCCTTCCAGAAGAAGGAACATGAGAAGGAGGTGCAGAACCGGAAGAG
AGGCAAGAGGCCGAGAGGCCGGCCAAGGAAGCTCACTGCCATGTCCTCCTGCAGCCGGCG
CTCCAAGCTCAAGGAACCCGATGCTCCCTCCAAATCCAAGTCCAGCAGTTCCTCCTCTTC
CTCCACGTCATCCTCCTCTTCCTCAGATGAAGAGGATGACAGTGACTTAGATGCTAAGAG
GGGTCCCCGGGGCCGCGAGACCCACCCAGTGCCGCAGAAGAAGGCCCAGATCCTGGTGGC
CAAACCCGAGCTGAAGGATCCCATCCGGAAGAAGCGGGGACGAAAGCCCCTGCCCCCAGA
GCAAAAGGCAACCCGAAGACCCGTGAGCCTGGCCAAGGTGCTGAAGACCGCCCGGAAGGA
TCTGGGGGCCCCGGCCAGCAAGCTGCCCCCTCCACTCAGCGCCCCCGTTGCAGGCCTGGC
AGCTCTGAAGGCCCACGCCAAGGAGGCCTGTGGCGGCCCCAGTGCCATGGCCACCCCAGA
GAACCTGGCCAGCCTAATGAAGGGCATGGCCAGTAGCCCCGGCCGGGGTGGCATCAGCTG
GCAGAGCTCCATCGTGCACTACATGAACCGGATGACCCAGAGCCAGGCCCAGGCTGCCAG
CAGGTTGGCGCTGAAGGCCCAGGCCACCAACAAGTGCGGCCTCGGGCTGGACCTGAAGGT
GAGGACGCAGAAAGGGGAGCTGGGAATGAGCCCTCCAGGAAGCAAAATCCCGAAGGCCCC
CAGCGGTGGGGCTGTGGAGCAGAAAGTGGGGAACACAGGGGGCCCCCCGCACACCCATGG
TGCCAGCAGGGTGCCTGCTGGGTGCCCAGGCCCCCAGCCAGCACCCACCCAGGAGCTGAG
CCTCCAGGTCTTGGACTTGCAGAGTGTCAAGAATGGCATGCCCGGGGTGGGTCTCCTTGC
CCGCCACGCCACCGCCACCAAGGGTGTCCCGGCCACCAACCCAGCCCCTGGGAAGGGCAC
TGGGAGTGGCCTCATTGGGGCCAGCGGGGCCACCATGCCCACCGACACAAGCAAAAGTGA
GAAGCTAGCTTCCAGAGCAGTGGCGCCACCCACCCCTGCCAGCAAGAGGGACTGTGTCAA
GGGCAGTGCTACCCCCAGTGGGCAGGAGAGCCGCACAGCCCCCGGAGAAGCCCGCAAGGC
GGCCACACTGCCAGAGATGAGCGCAGGTGAGGAGAGTAGCAGCTCGGACTCCGACCCCGA
CTCCGCCTCGCCGCCCAGCACTGGACAGAACCCGTCAGTGTCCGTTCAGACCAGCCAGGA
CTGGAAGCCCACCCGCAGCCTCATCGAGCACGTATTTGTCACCGACGTCACTGCCAACCT
CATCACCGTCACAGTGAAGGAGTCTCCCACCAGCGTGGGCTTCTTCAACCTGAGGCATTA
CGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T