POU3F4 ORF clone pFN21AB9640

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB9640

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Clone info.

Species

human

Clone Name

pFN21AB9640 Sequence (with vector) Restriction Map

Product ID

FHC03215

Flexi Clone PID

FXC03215

ORF Sequence

DNA sequence (1083 bp)
Protein sequence (361 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464667]

Gene

KIBB9640

Symbol

POU3F4

Alias : BRAIN-4, BRN-4, BRN4, DFN3, DFNX2, OCT-9, OTF-9, OTF9

Description

POU class 3 homeobox 4

Original Clone ID

cp00223

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1083 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 361 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14450.1 2.9e-101 100.0 POU3F4 CCDS5040.1 5.5e-41 56.3 POU3F2 CCDS33265.1 1.5e-40 60.1 POU3F3 CCDS30679.1 6.9e-37 51.6 POU3F1 CCDS55656.1 3.5e-24 42.6 POU2F1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR013847 205 222 PR00028 POU IPR013847 228 241 PR00028 POU IPR013847 244 259 PR00028 POU IPR013847 277 297 PR00028 POU IPR013847 312 327 PR00028 POU HMMPfam IPR000327 187 260 PF00157 POU-specific IPR001356 279 335 PF00046 Homeobox HMMSmart IPR000327 186 260 SM00352 POU-specific IPR001356 278 340 SM00389 Homeobox ProfileScan IPR000327 186 260 PS51179 POU-specific IPR001356 276 336 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_000298 361 300039,304400 100.0 100.0 NP_005595 443 600494 56.3 86.4 NP_006227 500 602480 60.1 81.2 NP_002690 451 602479 51.6 90.0 XP_011507957 671 164175 42.6 84.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9640 Download

>KIBB9640  1083 bp
ATGGCCACAGCTGCCTCGAATCCCTACAGCATTCTCAGTTCCACCTCCCTAGTCCATGCG
GACTCTGCGGGCATGCAGCAGGGGAGTCCTTTCCGCAACCCTCAGAAACTTCTCCAAAGT
GATTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGGGCATCACTGGGTGACCAGT
CTGAGCGACGGGGGCCCATGGTCCTCCACACTGGCCACCAGCCCCCTGGACCAGCAGGAC
GTGAAGCCCGGGCGCGAAGACCTGCAACTGGGTGCGATCATCCATCACCGCTCGCCACAC
GTAGCCCACCACTCACCGCACACTAACCACCCCAACGCCTGGGGGGCCAGCCCGGCACCG
AACCCGTCTATCACGTCAAGCGGCCAACCCCTCAACGTGTACTCGCAGCCTGGCTTCACC
GTGAGCGGCATGCTGGAACACGGGGGACTCACCCCACCTCCAGCTGCCGCCTCTGCACAG
AGCCTGCACCCGGTGCTCCGAGAGCCCCCGGATCACGGCGAACTGGGCTCGCACCATTGC
CAGGATCACTCCGACGAGGAGACGCCAACCTCTGATGAGTTGGAACAGTTCGCCAAACAA
TTCAAACAAAGAAGAATCAAGTTGGGCTTCACGCAGGCCGACGTGGGGTTGGCGCTGGGC
ACACTGTATGGTAACGTGTTCTCGCAGACCACCATCTGCAGGTTCGAGGCCTTGCAGCTG
AGCTTCAAAAATATGTGCAAGCTGAAGCCCCTGCTGAACAAGTGGCTGGAGGAGGCGGAT
TCGTCCACAGGGAGCCCGACCAGCATTGACAAGATCGCTGCACAGGGCCGCAAGCGCAAG
AAGCGGACCTCCATCGAGGTGAGTGTCAAGGGCGTACTGGAGACGCATTTCCTCAAGTGT
CCCAAGCCTGCCGCGCAGGAGATCTCCTCGCTGGCAGACAGCCTCCAGTTGGAGAAGGAA
GTGGTGCGTGTCTGGTTCTGTAATCGAAGACAAAAAGAGAAAAGAATGACTCCGCCAGGG
GATCAGCAGCCGCATGAGGTTTATTCGCACACCGTGAAAACAGACACATCTTGCCATGAT
CTC

ORF Protein

Cloned ORF protein sequence for pFN21AB9640 Download

>KIBB9640  361 aa
MATAASNPYSILSSTSLVHADSAGMQQGSPFRNPQKLLQSDYLQGVPSNGHPLGHHWVTS
LSDGGPWSSTLATSPLDQQDVKPGREDLQLGAIIHHRSPHVAHHSPHTNHPNAWGASPAP
NPSITSSGQPLNVYSQPGFTVSGMLEHGGLTPPPAAASAQSLHPVLREPPDHGELGSHHC
QDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQL
SFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKC
PKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGDQQPHEVYSHTVKTDTSCHD
L

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9640 Download

>pFN21AB9640  5788 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCACAGCTGCCTCGAATCCCTACAGCATTCT
CAGTTCCACCTCCCTAGTCCATGCGGACTCTGCGGGCATGCAGCAGGGGAGTCCTTTCCG
CAACCCTCAGAAACTTCTCCAAAGTGATTACTTGCAGGGAGTTCCCAGCAATGGGCATCC
CCTCGGGCATCACTGGGTGACCAGTCTGAGCGACGGGGGCCCATGGTCCTCCACACTGGC
CACCAGCCCCCTGGACCAGCAGGACGTGAAGCCCGGGCGCGAAGACCTGCAACTGGGTGC
GATCATCCATCACCGCTCGCCACACGTAGCCCACCACTCACCGCACACTAACCACCCCAA
CGCCTGGGGGGCCAGCCCGGCACCGAACCCGTCTATCACGTCAAGCGGCCAACCCCTCAA
CGTGTACTCGCAGCCTGGCTTCACCGTGAGCGGCATGCTGGAACACGGGGGACTCACCCC
ACCTCCAGCTGCCGCCTCTGCACAGAGCCTGCACCCGGTGCTCCGAGAGCCCCCGGATCA
CGGCGAACTGGGCTCGCACCATTGCCAGGATCACTCCGACGAGGAGACGCCAACCTCTGA
TGAGTTGGAACAGTTCGCCAAACAATTCAAACAAAGAAGAATCAAGTTGGGCTTCACGCA
GGCCGACGTGGGGTTGGCGCTGGGCACACTGTATGGTAACGTGTTCTCGCAGACCACCAT
CTGCAGGTTCGAGGCCTTGCAGCTGAGCTTCAAAAATATGTGCAAGCTGAAGCCCCTGCT
GAACAAGTGGCTGGAGGAGGCGGATTCGTCCACAGGGAGCCCGACCAGCATTGACAAGAT
CGCTGCACAGGGCCGCAAGCGCAAGAAGCGGACCTCCATCGAGGTGAGTGTCAAGGGCGT
ACTGGAGACGCATTTCCTCAAGTGTCCCAAGCCTGCCGCGCAGGAGATCTCCTCGCTGGC
AGACAGCCTCCAGTTGGAGAAGGAAGTGGTGCGTGTCTGGTTCTGTAATCGAAGACAAAA
AGAGAAAAGAATGACTCCGCCAGGGGATCAGCAGCCGCATGAGGTTTATTCGCACACCGT
GAAAACAGACACATCTTGCCATGATCTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT