POU3F4 ORF clone FXC03215

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Flexi ORF Clone FXC03215

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Clone info.

Species

human

Clone Name

pF1KB9640 Sequence (with vector) Restriction Map

Product ID

FXC03215

HaloTag Clone PID

FHC03215

ORF Sequence

DNA sequence (1083 bp)
Protein sequence (361 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464667]

Gene

KIBB9640

Symbol

POU3F4

Alias : BRAIN-4, BRN-4, BRN4, DFN3, DFNX2, OCT-9, OTF-9, OTF9

Description

POU class 3 homeobox 4

Original Clone ID

cp00223

Features of the cloned ORF sequence

Description

Length: 1083 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 361 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14450.1 2.9e-101 100.0 POU3F4 CCDS5040.1 5.5e-41 56.3 POU3F2 CCDS33265.1 1.5e-40 60.1 POU3F3 CCDS30679.1 6.9e-37 51.6 POU3F1 CCDS55656.1 3.5e-24 42.6 POU2F1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR013847 205 222 PR00028 POU IPR013847 228 241 PR00028 POU IPR013847 244 259 PR00028 POU IPR013847 277 297 PR00028 POU IPR013847 312 327 PR00028 POU HMMPfam IPR000327 187 260 PF00157 POU-specific IPR001356 279 335 PF00046 Homeobox HMMSmart IPR000327 186 260 SM00352 POU-specific IPR001356 278 340 SM00389 Homeobox ProfileScan IPR000327 186 260 PS51179 POU-specific IPR001356 276 336 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_000298 361 300039,304400 100.0 100.0 NP_005595 443 600494 56.3 86.4 NP_006227 500 602480 60.1 81.2 NP_002690 451 602479 51.6 90.0 XP_011507957 671 164175 42.6 84.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9640 Download

>KIBB9640  1083 bp
ATGGCCACAGCTGCCTCGAATCCCTACAGCATTCTCAGTTCCACCTCCCTAGTCCATGCG
GACTCTGCGGGCATGCAGCAGGGGAGTCCTTTCCGCAACCCTCAGAAACTTCTCCAAAGT
GATTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGGGCATCACTGGGTGACCAGT
CTGAGCGACGGGGGCCCATGGTCCTCCACACTGGCCACCAGCCCCCTGGACCAGCAGGAC
GTGAAGCCCGGGCGCGAAGACCTGCAACTGGGTGCGATCATCCATCACCGCTCGCCACAC
GTAGCCCACCACTCACCGCACACTAACCACCCCAACGCCTGGGGGGCCAGCCCGGCACCG
AACCCGTCTATCACGTCAAGCGGCCAACCCCTCAACGTGTACTCGCAGCCTGGCTTCACC
GTGAGCGGCATGCTGGAACACGGGGGACTCACCCCACCTCCAGCTGCCGCCTCTGCACAG
AGCCTGCACCCGGTGCTCCGAGAGCCCCCGGATCACGGCGAACTGGGCTCGCACCATTGC
CAGGATCACTCCGACGAGGAGACGCCAACCTCTGATGAGTTGGAACAGTTCGCCAAACAA
TTCAAACAAAGAAGAATCAAGTTGGGCTTCACGCAGGCCGACGTGGGGTTGGCGCTGGGC
ACACTGTATGGTAACGTGTTCTCGCAGACCACCATCTGCAGGTTCGAGGCCTTGCAGCTG
AGCTTCAAAAATATGTGCAAGCTGAAGCCCCTGCTGAACAAGTGGCTGGAGGAGGCGGAT
TCGTCCACAGGGAGCCCGACCAGCATTGACAAGATCGCTGCACAGGGCCGCAAGCGCAAG
AAGCGGACCTCCATCGAGGTGAGTGTCAAGGGCGTACTGGAGACGCATTTCCTCAAGTGT
CCCAAGCCTGCCGCGCAGGAGATCTCCTCGCTGGCAGACAGCCTCCAGTTGGAGAAGGAA
GTGGTGCGTGTCTGGTTCTGTAATCGAAGACAAAAAGAGAAAAGAATGACTCCGCCAGGG
GATCAGCAGCCGCATGAGGTTTATTCGCACACCGTGAAAACAGACACATCTTGCCATGAT
CTC

ORF Protein

Cloned ORF protein sequence for pF1KB9640 Download

>KIBB9640  361 aa
MATAASNPYSILSSTSLVHADSAGMQQGSPFRNPQKLLQSDYLQGVPSNGHPLGHHWVTS
LSDGGPWSSTLATSPLDQQDVKPGREDLQLGAIIHHRSPHVAHHSPHTNHPNAWGASPAP
NPSITSSGQPLNVYSQPGFTVSGMLEHGGLTPPPAAASAQSLHPVLREPPDHGELGSHHC
QDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQL
SFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKC
PKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGDQQPHEVYSHTVKTDTSCHD
L

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9640 Download

>pF1KB9640  4196 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCACAGCT
GCCTCGAATCCCTACAGCATTCTCAGTTCCACCTCCCTAGTCCATGCGGACTCTGCGGGC
ATGCAGCAGGGGAGTCCTTTCCGCAACCCTCAGAAACTTCTCCAAAGTGATTACTTGCAG
GGAGTTCCCAGCAATGGGCATCCCCTCGGGCATCACTGGGTGACCAGTCTGAGCGACGGG
GGCCCATGGTCCTCCACACTGGCCACCAGCCCCCTGGACCAGCAGGACGTGAAGCCCGGG
CGCGAAGACCTGCAACTGGGTGCGATCATCCATCACCGCTCGCCACACGTAGCCCACCAC
TCACCGCACACTAACCACCCCAACGCCTGGGGGGCCAGCCCGGCACCGAACCCGTCTATC
ACGTCAAGCGGCCAACCCCTCAACGTGTACTCGCAGCCTGGCTTCACCGTGAGCGGCATG
CTGGAACACGGGGGACTCACCCCACCTCCAGCTGCCGCCTCTGCACAGAGCCTGCACCCG
GTGCTCCGAGAGCCCCCGGATCACGGCGAACTGGGCTCGCACCATTGCCAGGATCACTCC
GACGAGGAGACGCCAACCTCTGATGAGTTGGAACAGTTCGCCAAACAATTCAAACAAAGA
AGAATCAAGTTGGGCTTCACGCAGGCCGACGTGGGGTTGGCGCTGGGCACACTGTATGGT
AACGTGTTCTCGCAGACCACCATCTGCAGGTTCGAGGCCTTGCAGCTGAGCTTCAAAAAT
ATGTGCAAGCTGAAGCCCCTGCTGAACAAGTGGCTGGAGGAGGCGGATTCGTCCACAGGG
AGCCCGACCAGCATTGACAAGATCGCTGCACAGGGCCGCAAGCGCAAGAAGCGGACCTCC
ATCGAGGTGAGTGTCAAGGGCGTACTGGAGACGCATTTCCTCAAGTGTCCCAAGCCTGCC
GCGCAGGAGATCTCCTCGCTGGCAGACAGCCTCCAGTTGGAGAAGGAAGTGGTGCGTGTC
TGGTTCTGTAATCGAAGACAAAAAGAGAAAAGAATGACTCCGCCAGGGGATCAGCAGCCG
CATGAGGTTTATTCGCACACCGTGAAAACAGACACATCTTGCCATGATCTCGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT