LNX2 ORF clone pFN21AB8020

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB8020

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Clone info.

Species

human

Clone Name

pFN21AB8020 Sequence (with vector) Restriction Map

Product ID

FHC10625

Flexi Clone PID

FXC10625

ORF Sequence

DNA sequence (2070 bp)
Protein sequence (690 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587457]

Gene

KIBB8020

Symbol

LNX2

Alias : PDZRN1

Description

ligand of numb-protein X 2

Original Clone ID

cp01183

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 2070 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 690 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9323.1 7.8e-166 99.9 LNX2 CCDS3492.1 2.1e-55 50.9 LNX1 CCDS47057.1 2.9e-18 48.8 LNX1 CCDS59120.1 4e-17 33.6 MPDZ CCDS83342.1 4e-17 33.6 MPDZ The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 50 86 PF00097 Zinc finger IPR001478 234 315 PF00595 PDZ/DHR/GLGF IPR001478 340 418 PF00595 PDZ/DHR/GLGF IPR001478 469 544 PF00595 PDZ/DHR/GLGF IPR001478 603 682 PF00595 PDZ/DHR/GLGF HMMSmart IPR001841 50 87 SM00184 Zinc finger IPR001478 243 318 SM00228 PDZ/DHR/GLGF IPR001478 349 422 SM00228 PDZ/DHR/GLGF IPR001478 477 556 SM00228 PDZ/DHR/GLGF IPR001478 609 686 SM00228 PDZ/DHR/GLGF ProfileScan IPR001841 50 88 PS50089 Zinc finger IPR001478 233 318 PS50106 PDZ/DHR/GLGF IPR001478 339 422 PS50106 PDZ/DHR/GLGF IPR001478 468 554 PS50106 PDZ/DHR/GLGF IPR001478 600 682 PS50106 PDZ/DHR/GLGF
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_699202 690 609733 99.9 100.0 XP_016875923 690 609733 99.9 100.0 XP_011533297 567 609733 82.0 100.0 XP_016864265 728 609732 48.8 95.8 XP_005265842 728 609732 48.8 95.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8020 Download

>KIBB8020  2070 bp
ATGGGAACAACAAGTGATGAGATGGTGTCTGTGGAACAGACCTCCTCCTCTTCTCTAAAC
CCCCTGTGTTTTGAATGTGGCCAACAGCACTGGACAAGAGAAAACCATTTGTACAATTAC
CAGAATGAAGTGGATGATGACCTAGTCTGCCATATTTGCCTTCAACCTCTGCTGCAGCCA
CTAGACACACCCTGTGGACATACATTCTGCTACAAGTGCCTCAGAAACTTTTTACAAGAG
AAAGATTTCTGTCCGTTGGACCGGAAAAGACTTCATTTTAAGTTGTGCAAGAAGTCTAGT
ATTCTAGTTCATAAACTCCTAGACAAATTATTAGTTTTATGTCCATTTTCTTCAGTGTGC
AAAGATGTAATGCAACGTTGTGATCTGGAGGCACATCTCAAAAACAGATGTCCTGGAGCT
TCTCATCGGAGAGTTGCCCTGGAGAGAAGGAAAACTAGTAGAACTCAAGCAGAGATTGAG
AATGAAAATGGGCCCACTCTACTAGATCCTGCAGGTACCTTATCTCCAGAAGCAGACTGT
TTGGGGACAGGCGCAGTGCCTGTGGAGCGGCACTTGACATCAGCGTCTCTTCCCACATGG
AGTGAGGAGCCTGGCCTTGACAACCCTGCCTTTGAGGAGAGCGCTGGAGCTGACACCACA
CAACAGCCACTTAGTTTACCAGAAGGAGAAATCACCACGATTGAAATTCATCGGTCCAAT
CCTTACATTCAGTTAGGAATCAGCATTGTGGGTGGCAACGAAACACCTTTGATTAACATT
GTCATCCAGGAGGTCTATCGGGATGGGGTCATTGCCAGAGACGGGAGACTTCTTGCTGGA
GACCAGATTCTTCAGGTCAACAACTACAATATCAGCAATGTGTCCCATAACTATGCCCGA
GCTGTCCTTTCCCAGCCCTGCAACACACTGCATCTTACTGTGCTTCGAGAGAGGCGCTTT
GGCAACCGAGCACACAACCATTCTGATAGTAACTCTCCACGAGAAGAGATTTTCCAAGTG
GCTCTTCATAAACGGGACTCTGGTGAACAGCTTGGCATTAAATTGGTGCGAAGGACAGAT
GAGCCAGGGGTTTTTATTCTTGACCTGTTGGAAGGGGGGTTGGCTGCCCAGGACGGCAGG
CTAAGCAGCAATGACCGAGTGCTGGCCATCAATGGGCACGACCTGAAGTATGGAACTCCG
GAGCTTGCTGCCCAGATTATTCAGGCCAGTGGAGAGAGAGTGAATTTAACAATTGCTAGA
CCAGGGAAACCCCAGCCTGGTAACACCATTAGAGAAGCAGGAAATCATAGCAGCAGCAGC
CAGCACCACACACCACCACCGTATTATAGCAGACCAAGCTCACATAAGGATCTTACTCAG
TGTGTTACATGCCAAGAAAAACACATTACTGTAAAGAAGGAACCACATGAATCCCTTGGC
ATGACCGTTGCTGGGGGCAGGGGAAGTAAGAGTGGTGAGCTGCCCATCTTTGTGACCAGT
GTGCCACCCCATGGCTGCCTTGCACGAGATGGCAGAATAAAGAGAGGTGATGTGTTGCTA
AATATCAACGGCATTGATTTGACCAATTTAAGTCACAGTGAGGCAGTTGCAATGCTGAAA
GCCAGTGCCGCGTCCCCTGCTGTTGCCCTTAAAGCACTTGAGGTCCAGATTGTTGAGGAG
GCGACTCAGAACGCGGAGGAGCAGCCGAGTACTTTCAGCGAAAATGAGTATGATGCCAGT
TGGTCCCCATCATGGGTCATGTGGCTTGGGCTTCCCAGCACACTTCATAGCTGCCACGAT
ATAGTTTTACGAAGAAGTTACTTGGGAAGTTGGGGCTTTAGTATCGTTGGTGGATATGAA
GAGAACCACACCAATCAGCCTTTTTTCATTAAAACTATTGTCTTGGGAACTCCTGCTTAT
TATGATGGAAGATTAAAGTGTGGTGACATGATTGTGGCCGTAAATGGGCTGTCAACCGTG
GGCATGAGCCACTCTGCACTAGTTCCCATGTTGAAGGAGCAGAGGAACAAAGTCACTCTG
ACCGTTATTTGTTGGCCTGGCAGCCTTGTA

ORF Protein

Cloned ORF protein sequence for pFN21AB8020 Download

>KIBB8020  690 aa
MGTTSDEMVSVEQTSSSSLNPLCFECGQQHWTRENHLYNYQNEVDDDLVCHICLQPLLQP
LDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKLLDKLLVLCPFSSVC
KDVMQRCDLEAHLKNRCPGASHRRVALERRKTSRTQAEIENENGPTLLDPAGTLSPEADC
LGTGAVPVERHLTSASLPTWSEEPGLDNPAFEESAGADTTQQPLSLPEGEITTIEIHRSN
PYIQLGISIVGGNETPLINIVIQEVYRDGVIARDGRLLAGDQILQVNNYNISNVSHNYAR
AVLSQPCNTLHLTVLRERRFGNRAHNHSDSNSPREEIFQVALHKRDSGEQLGIKLVRRTD
EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNLTIAR
PGKPQPGNTIREAGNHSSSSQHHTPPPYYSRPSSHKDLTQCVTCQEKHITVKKEPHESLG
MTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDVLLNINGIDLTNLSHSEAVAMLK
ASAASPAVALKALEVQIVEEATQNAEEQPSTFSENEYDASWSPSWVMWLGLPSTLHSCHD
IVLRRSYLGSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTV
GMSHSALVPMLKEQRNKVTLTVICWPGSLV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8020 Download

>pFN21AB8020  6775 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGAACAACAAGTGATGAGATGGTGTCTGTGGA
ACAGACCTCCTCCTCTTCTCTAAACCCCCTGTGTTTTGAATGTGGCCAACAGCACTGGAC
AAGAGAAAACCATTTGTACAATTACCAGAATGAAGTGGATGATGACCTAGTCTGCCATAT
TTGCCTTCAACCTCTGCTGCAGCCACTAGACACACCCTGTGGACATACATTCTGCTACAA
GTGCCTCAGAAACTTTTTACAAGAGAAAGATTTCTGTCCGTTGGACCGGAAAAGACTTCA
TTTTAAGTTGTGCAAGAAGTCTAGTATTCTAGTTCATAAACTCCTAGACAAATTATTAGT
TTTATGTCCATTTTCTTCAGTGTGCAAAGATGTAATGCAACGTTGTGATCTGGAGGCACA
TCTCAAAAACAGATGTCCTGGAGCTTCTCATCGGAGAGTTGCCCTGGAGAGAAGGAAAAC
TAGTAGAACTCAAGCAGAGATTGAGAATGAAAATGGGCCCACTCTACTAGATCCTGCAGG
TACCTTATCTCCAGAAGCAGACTGTTTGGGGACAGGCGCAGTGCCTGTGGAGCGGCACTT
GACATCAGCGTCTCTTCCCACATGGAGTGAGGAGCCTGGCCTTGACAACCCTGCCTTTGA
GGAGAGCGCTGGAGCTGACACCACACAACAGCCACTTAGTTTACCAGAAGGAGAAATCAC
CACGATTGAAATTCATCGGTCCAATCCTTACATTCAGTTAGGAATCAGCATTGTGGGTGG
CAACGAAACACCTTTGATTAACATTGTCATCCAGGAGGTCTATCGGGATGGGGTCATTGC
CAGAGACGGGAGACTTCTTGCTGGAGACCAGATTCTTCAGGTCAACAACTACAATATCAG
CAATGTGTCCCATAACTATGCCCGAGCTGTCCTTTCCCAGCCCTGCAACACACTGCATCT
TACTGTGCTTCGAGAGAGGCGCTTTGGCAACCGAGCACACAACCATTCTGATAGTAACTC
TCCACGAGAAGAGATTTTCCAAGTGGCTCTTCATAAACGGGACTCTGGTGAACAGCTTGG
CATTAAATTGGTGCGAAGGACAGATGAGCCAGGGGTTTTTATTCTTGACCTGTTGGAAGG
GGGGTTGGCTGCCCAGGACGGCAGGCTAAGCAGCAATGACCGAGTGCTGGCCATCAATGG
GCACGACCTGAAGTATGGAACTCCGGAGCTTGCTGCCCAGATTATTCAGGCCAGTGGAGA
GAGAGTGAATTTAACAATTGCTAGACCAGGGAAACCCCAGCCTGGTAACACCATTAGAGA
AGCAGGAAATCATAGCAGCAGCAGCCAGCACCACACACCACCACCGTATTATAGCAGACC
AAGCTCACATAAGGATCTTACTCAGTGTGTTACATGCCAAGAAAAACACATTACTGTAAA
GAAGGAACCACATGAATCCCTTGGCATGACCGTTGCTGGGGGCAGGGGAAGTAAGAGTGG
TGAGCTGCCCATCTTTGTGACCAGTGTGCCACCCCATGGCTGCCTTGCACGAGATGGCAG
AATAAAGAGAGGTGATGTGTTGCTAAATATCAACGGCATTGATTTGACCAATTTAAGTCA
CAGTGAGGCAGTTGCAATGCTGAAAGCCAGTGCCGCGTCCCCTGCTGTTGCCCTTAAAGC
ACTTGAGGTCCAGATTGTTGAGGAGGCGACTCAGAACGCGGAGGAGCAGCCGAGTACTTT
CAGCGAAAATGAGTATGATGCCAGTTGGTCCCCATCATGGGTCATGTGGCTTGGGCTTCC
CAGCACACTTCATAGCTGCCACGATATAGTTTTACGAAGAAGTTACTTGGGAAGTTGGGG
CTTTAGTATCGTTGGTGGATATGAAGAGAACCACACCAATCAGCCTTTTTTCATTAAAAC
TATTGTCTTGGGAACTCCTGCTTATTATGATGGAAGATTAAAGTGTGGTGACATGATTGT
GGCCGTAAATGGGCTGTCAACCGTGGGCATGAGCCACTCTGCACTAGTTCCCATGTTGAA
GGAGCAGAGGAACAAAGTCACTCTGACCGTTATTTGTTGGCCTGGCAGCCTTGTAGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT