PRICKLE3 ORF clone pFN21AB7840

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB7840

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Clone info.

Species

human

Clone Name

pFN21AB7840 Sequence (with vector) Restriction Map

Product ID

FHC05845

Flexi Clone PID

FXC05845

ORF Sequence

DNA sequence (1845 bp)
Protein sequence (615 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464065]

Gene

KIBB7840

Symbol

PRICKLE3

Alias : LMO6, LOAM, Pk3

Description

prickle homolog 3, transcript variant 1

Original Clone ID

cs00340

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1845 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 615 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14320.1 6e-135 100.0 PRICKLE3 CCDS78481.1 1e-118 100.0 PRICKLE3 CCDS2902.1 2.1e-53 50.8 PRICKLE2 CCDS8742.1 6.9e-46 65.1 PRICKLE1 CCDS34449.1 2.1e-18 36.2 PRICKLE4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR010442 75 177 PF06297 PET domain IPR001781 186 245 PF00412 Zinc finger IPR001781 251 306 PF00412 Zinc finger IPR001781 311 364 PF00412 Zinc finger HMMSmart IPR001781 185 242 SM00132 Zinc finger IPR001781 250 302 SM00132 Zinc finger IPR001781 310 365 SM00132 Zinc finger ProfileScan IPR010442 74 182 PS51303 PET domain IPR001781 184 248 PS50023 Zinc finger IPR001781 249 309 PS50023 Zinc finger IPR001781 310 373 PS50023 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006141 615 300111 100.0 100.0 NP_001294908 547 300111 100.0 88.9 XP_011531737 900 608501,613832 51.8 97.4 XP_011531736 930 608501,613832 51.8 97.4 XP_011531742 679 608501,613832 52.3 94.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7840 Download

>KIBB7840  1845 bp
ATGTTCGCGCGTGGGTCCCGGAGGCGCCGCTCCGGGCGTGCGCCTCCAGAGGCAGAGGAC
CCAGACCGGGGCCAGCCCTGCAACTCCTGTAGGGAGCAGTGCCCTGGCTTCCTGCTCCAC
GGCTGGAGAAAGATCTGCCAGCATTGCAAATGCCCGCGGGAGGAGCATGCAGTGCACGCG
GTGCCTGTGGACCTGGAACGCATCATGTGTCGGCTAATCTCGGACTTCCAGCGCCACTCC
ATCTCCGACGACGACTCAGGCTGTGCATCGGAGGAGTATGCCTGGGTGCCCCCAGGCCTT
AAGCCGGAGCAGGTATATCAATTTTTCAGCTGCCTCCCAGAGGACAAGGTCCCCTACGTC
AACAGTCCTGGGGAGAAATACAGGATCAAGCAGCTGCTGCACCAGCTGCCCCCACACGAC
AGTGAGGCACAGTACTGCACAGCACTGGAAGAGGAGGAAAAGAAAGAGCTCCGAGCCTTT
AGCCAGCAGCGGAAGCGGGAGAATCTGGGGCGTGGCATCGTGCGCATCTTCCCGGTGACC
ATCACTGGGGCCATCTGTGAGGAGTGCGGAAAGCAGATTGGAGGTGGGGACATCGCAGTG
TTTGCCAGCCGTGCAGGCCTGGGTGCCTGCTGGCACCCACAGTGCTTCGTGTGTACCACG
TGCCAGGAACTGCTGGTTGACCTCATCTACTTCTACCATGTTGGCAAGGTCTACTGCGGG
CGTCACCATGCCGAATGCCTGCGTCCACGCTGCCAAGCCTGTGACGAGATCATCTTCTCC
CCTGAGTGCACGGAGGCTGAGGGCCGCCACTGGCACATGGATCACTTCTGCTGCTTTGAG
TGTGAAGCTTCACTAGGAGGGCAGCGCTATGTCATGCGTCAGAGCCGCCCCCACTGCTGC
GCCTGCTACGAGGCCCGCCACGCGGAGTACTGTGATGGCTGTGGGGAGCACATCGGCCTG
GACCAAGGCCAGATGGCTTACGAGGGCCAGCACTGGCATGCCTCAGACCGCTGCTTCTGC
TGTAGTCGCTGTGGGCGGGCCCTGCTGGGCCGCCCATTCCTGCCACGCCGAGGCCTAATC
TTCTGCTCTCGAGCCTGCAGCCTTGGGTCCGAGCCCACAGCTCCAGGGCCGAGCCGCCGC
AGCTGGAGTGCCGGCCCTGTCACAGCCCCACTTGCAGCCTCCACAGCCTCTTTCTCTGCT
GTGAAGGGGGCATCAGAGACCACCACCAAAGGCACCAGCACAGAGTTAGCGCCAGCTACA
GGCCCTGAGGAGCCCTCCCGCTTTCTGAGAGGGGCTCCCCACCGCCACTCCATGCCGGAA
CTGGGGCTCCGCAGTGTCCCCGAGCCGCCCCCAGAGTCCCCCGGCCAGCCTAACCTGCGC
CCAGATGATAGTGCCTTCGGTCGTCAGAGCACCCCACGCGTCAGCTTCCGCGACCCTCTG
GTGTCTGAAGGAGGCCCGCGCCGGACCCTGAGTGCACCCCCGGCCCAGCGCCGCAGGCCA
CGCAGTCCCCCACCCAGGGCCCCCAGCCGTCGCCGCCACCATCATCATAATCACCATCAC
CATCACAACCGCCACCCAAGCAGACGTCGCCACTATCAATGTGACGCGGGATCAGGGTCA
GACTCGGAATCTTGCTCCAGCTCGCCCTCCAGTTCCAGTTCCGAATCATCAGAGGATGAT
GGCTTCTTCCTAGGAGAGCGCATCCCTCTGCCCCCGCATTTGTGCAGGCCCATGCCTGCT
CAGGACACTGCAATGGAGACCTTCAACTCCCCATCTTTATCGCTCCCCAGGGACTCTCGC
GCAGGGATGCCTCGTCAGGCCCGAGACAAGAACTGCATCGTGGCT

ORF Protein

Cloned ORF protein sequence for pFN21AB7840 Download

>KIBB7840  615 aa
MFARGSRRRRSGRAPPEAEDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHA
VPVDLERIMCRLISDFQRHSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKVPYV
NSPGEKYRIKQLLHQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVT
ITGAICEECGKQIGGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCG
RHHAECLRPRCQACDEIIFSPECTEAEGRHWHMDHFCCFECEASLGGQRYVMRQSRPHCC
ACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWHASDRCFCCSRCGRALLGRPFLPRRGLI
FCSRACSLGSEPTAPGPSRRSWSAGPVTAPLAASTASFSAVKGASETTTKGTSTELAPAT
GPEEPSRFLRGAPHRHSMPELGLRSVPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPL
VSEGGPRRTLSAPPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCDAGSGS
DSESCSSSPSSSSSESSEDDGFFLGERIPLPPHLCRPMPAQDTAMETFNSPSLSLPRDSR
AGMPRQARDKNCIVA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7840 Download

>pFN21AB7840  6550 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTTCGCGCGTGGGTCCCGGAGGCGCCGCTCCGG
GCGTGCGCCTCCAGAGGCAGAGGACCCAGACCGGGGCCAGCCCTGCAACTCCTGTAGGGA
GCAGTGCCCTGGCTTCCTGCTCCACGGCTGGAGAAAGATCTGCCAGCATTGCAAATGCCC
GCGGGAGGAGCATGCAGTGCACGCGGTGCCTGTGGACCTGGAACGCATCATGTGTCGGCT
AATCTCGGACTTCCAGCGCCACTCCATCTCCGACGACGACTCAGGCTGTGCATCGGAGGA
GTATGCCTGGGTGCCCCCAGGCCTTAAGCCGGAGCAGGTATATCAATTTTTCAGCTGCCT
CCCAGAGGACAAGGTCCCCTACGTCAACAGTCCTGGGGAGAAATACAGGATCAAGCAGCT
GCTGCACCAGCTGCCCCCACACGACAGTGAGGCACAGTACTGCACAGCACTGGAAGAGGA
GGAAAAGAAAGAGCTCCGAGCCTTTAGCCAGCAGCGGAAGCGGGAGAATCTGGGGCGTGG
CATCGTGCGCATCTTCCCGGTGACCATCACTGGGGCCATCTGTGAGGAGTGCGGAAAGCA
GATTGGAGGTGGGGACATCGCAGTGTTTGCCAGCCGTGCAGGCCTGGGTGCCTGCTGGCA
CCCACAGTGCTTCGTGTGTACCACGTGCCAGGAACTGCTGGTTGACCTCATCTACTTCTA
CCATGTTGGCAAGGTCTACTGCGGGCGTCACCATGCCGAATGCCTGCGTCCACGCTGCCA
AGCCTGTGACGAGATCATCTTCTCCCCTGAGTGCACGGAGGCTGAGGGCCGCCACTGGCA
CATGGATCACTTCTGCTGCTTTGAGTGTGAAGCTTCACTAGGAGGGCAGCGCTATGTCAT
GCGTCAGAGCCGCCCCCACTGCTGCGCCTGCTACGAGGCCCGCCACGCGGAGTACTGTGA
TGGCTGTGGGGAGCACATCGGCCTGGACCAAGGCCAGATGGCTTACGAGGGCCAGCACTG
GCATGCCTCAGACCGCTGCTTCTGCTGTAGTCGCTGTGGGCGGGCCCTGCTGGGCCGCCC
ATTCCTGCCACGCCGAGGCCTAATCTTCTGCTCTCGAGCCTGCAGCCTTGGGTCCGAGCC
CACAGCTCCAGGGCCGAGCCGCCGCAGCTGGAGTGCCGGCCCTGTCACAGCCCCACTTGC
AGCCTCCACAGCCTCTTTCTCTGCTGTGAAGGGGGCATCAGAGACCACCACCAAAGGCAC
CAGCACAGAGTTAGCGCCAGCTACAGGCCCTGAGGAGCCCTCCCGCTTTCTGAGAGGGGC
TCCCCACCGCCACTCCATGCCGGAACTGGGGCTCCGCAGTGTCCCCGAGCCGCCCCCAGA
GTCCCCCGGCCAGCCTAACCTGCGCCCAGATGATAGTGCCTTCGGTCGTCAGAGCACCCC
ACGCGTCAGCTTCCGCGACCCTCTGGTGTCTGAAGGAGGCCCGCGCCGGACCCTGAGTGC
ACCCCCGGCCCAGCGCCGCAGGCCACGCAGTCCCCCACCCAGGGCCCCCAGCCGTCGCCG
CCACCATCATCATAATCACCATCACCATCACAACCGCCACCCAAGCAGACGTCGCCACTA
TCAATGTGACGCGGGATCAGGGTCAGACTCGGAATCTTGCTCCAGCTCGCCCTCCAGTTC
CAGTTCCGAATCATCAGAGGATGATGGCTTCTTCCTAGGAGAGCGCATCCCTCTGCCCCC
GCATTTGTGCAGGCCCATGCCTGCTCAGGACACTGCAATGGAGACCTTCAACTCCCCATC
TTTATCGCTCCCCAGGGACTCTCGCGCAGGGATGCCTCGTCAGGCCCGAGACAAGAACTG
CATCGTGGCTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT