CELF3 ORF clone pFN21AB7008

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Halotag ORF Clone pFN21AB7008

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Clone info.

Species

human

Clone Name

pFN21AB7008 Sequence (with vector) Restriction Map

Product ID

FHC01836

Flexi Clone PID

FXC01836

Original Clone PID

ORK01836

ORF Sequence

DNA sequence (1395 bp)
Protein sequence (465 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385174]

Gene

KIBB7008

Symbol

CELF3

Alias : BRUNOL1, CAGH4, ERDA4, ETR-1, TNRC4

Description

CUGBP, Elav-like family member 3, transcript variant 1

Original Clone ID

ff04527

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1395 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 465 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS1002.1 2.6e-79 100.0 CELF3 CCDS45858.1 3.5e-43 64.0 CELF4 CCDS53367.1 1.3e-41 89.2 CELF3 CCDS10242.1 6.5e-38 68.7 CELF6 CCDS12106.1 1.1e-36 66.0 CELF5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 9 76 PF00076 RNA recognition motif domain IPR000504 97 161 PF00076 RNA recognition motif domain IPR000504 382 451 PF00076 RNA recognition motif domain HMMSmart IPR000504 8 84 SM00360 RNA recognition motif domain IPR000504 96 171 SM00360 RNA recognition motif domain IPR000504 381 454 SM00360 RNA recognition motif domain ProfileScan IPR000504 7 88 PS50102 RNA recognition motif domain IPR000504 95 175 PS50102 RNA recognition motif domain IPR000504 380 458 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_009116 465 612678 100.0 100.0 NP_001278035 464 612678 99.8 100.0 NP_001278036 464 612678 99.8 100.0 NP_001166119 418 612678 100.0 89.7 XP_011507414 389 612678 100.0 83.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7008 Download

>KIBB7008  1395 bp
ATGAAGGAGCCGGATGCCATCAAGCTGTTTGTGGGGCAGATCCCGAGGCATCTGGAGGAG
AAGGACCTGAAGCCCATCTTCGAACAGTTTGGTCGGATCTTTGAGCTGACTGTCATCAAG
GACAAGTACACCGGGCTGCACAAGGGATGTGCCTTCCTGACATACTGTGCCCGGGATTCA
GCCCTGAAGGCCCAGAGCGCCCTGCACGAACAGAAGACGCTTCCAGGGATGAACAGGCCG
ATCCAGGTCAAGCCAGCCGACAGCGAGAGCCGAGGAGAAGACCGGAAGCTCTTTGTGGGG
ATGCTAGGGAAGCAGCAGACAGATGAGGACGTCCGGAAGATGTTTGAGCCCTTCGGGACC
ATCGACGAGTGCACTGTGCTCCGGGGGCCAGATGGCACCAGCAAAGGCTGCGCCTTCGTG
AAGTTCCAGACCCACGCTGAGGCCCAGGCGGCCATCAACACCCTTCACAGCAGCCGGACC
CTGCCAGGTGCCTCGTCCAGCCTGGTGGTGAAGTTTGCTGACACTGAGAAGGAGCGAGGT
CTCCGCCGCATGCAGCAGGTGGCCACCCAGTTGGGCATGTTCAGCCCCATCGCCCTCCAG
TTTGGAGCCTACAGCGCCTACACCCAGGCCCTGATGCAGCAGCAGGCGGCCCTGGTAGCG
GCTCACAGTGCCTACCTCAGCCCCATGGCCACCATGGCTGCCGTGCAGATGCAGCACATG
GCTGCCATCAATGCCAATGGCCTCATCGCCACCCCCATCACCCCATCCTCAGGAACCAGC
ACCCCTCCTGCCATCGCTGCCACGCCTGTCTCTGCCATTCCGGCTGCCCTGGGCGTCAAC
GGCTACAGCCCGGTGCCCACCCAGCCCACTGGGCAGCCTGCCCCTGATGCTCTGTATCCC
AACGGGGTTCACCCCTACCCAGCCCAGAGCCCCGCGGCCCCCGTGGACCCCCTGCAGCAG
GCCTACGCGGGGATGCAGCACTACACAGCAGCCTACCCAGCAGCCTACAGCCTGGTTGCA
CCTGCGTTCCCGCAGCCTCCAGCCCTGGTCGCCCAGCAGCCCCCACCACCACCTCAACAG
CAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAAAGAGAAGGCCCTGATGGCTGC
AACATCTTCATCTACCACCTGCCCCAGGAGTTCACTGACTCAGAGATCCTCCAGATGTTT
GTCCCCTTTGGCCACGTCATCTCAGCCAAAGTCTTTGTTGACCGAGCCACCAATCAAAGC
AAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGCCAGTGCCCAGGCTGCCATCCAGGCC
ATGAATGGCTTCCAGATCGGCATGAAGCGCCTCAAAGTCCAGCTAAAGCGGCCTAAGGAT
GCCAACCGGCCCTAC

ORF Protein

Cloned ORF protein sequence for pFN21AB7008 Download

>KIBB7008  465 aa
MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS
ALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGT
IDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERG
LRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHM
AAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYP
NGVHPYPAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQ
QQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQS
KCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7008 Download

>pFN21AB7008  6100 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAAGGAGCCGGATGCCATCAAGCTGTTTGTGGG
GCAGATCCCGAGGCATCTGGAGGAGAAGGACCTGAAGCCCATCTTCGAACAGTTTGGTCG
GATCTTTGAGCTGACTGTCATCAAGGACAAGTACACCGGGCTGCACAAGGGATGTGCCTT
CCTGACATACTGTGCCCGGGATTCAGCCCTGAAGGCCCAGAGCGCCCTGCACGAACAGAA
GACGCTTCCAGGGATGAACAGGCCGATCCAGGTCAAGCCAGCCGACAGCGAGAGCCGAGG
AGAAGACCGGAAGCTCTTTGTGGGGATGCTAGGGAAGCAGCAGACAGATGAGGACGTCCG
GAAGATGTTTGAGCCCTTCGGGACCATCGACGAGTGCACTGTGCTCCGGGGGCCAGATGG
CACCAGCAAAGGCTGCGCCTTCGTGAAGTTCCAGACCCACGCTGAGGCCCAGGCGGCCAT
CAACACCCTTCACAGCAGCCGGACCCTGCCAGGTGCCTCGTCCAGCCTGGTGGTGAAGTT
TGCTGACACTGAGAAGGAGCGAGGTCTCCGCCGCATGCAGCAGGTGGCCACCCAGTTGGG
CATGTTCAGCCCCATCGCCCTCCAGTTTGGAGCCTACAGCGCCTACACCCAGGCCCTGAT
GCAGCAGCAGGCGGCCCTGGTAGCGGCTCACAGTGCCTACCTCAGCCCCATGGCCACCAT
GGCTGCCGTGCAGATGCAGCACATGGCTGCCATCAATGCCAATGGCCTCATCGCCACCCC
CATCACCCCATCCTCAGGAACCAGCACCCCTCCTGCCATCGCTGCCACGCCTGTCTCTGC
CATTCCGGCTGCCCTGGGCGTCAACGGCTACAGCCCGGTGCCCACCCAGCCCACTGGGCA
GCCTGCCCCTGATGCTCTGTATCCCAACGGGGTTCACCCCTACCCAGCCCAGAGCCCCGC
GGCCCCCGTGGACCCCCTGCAGCAGGCCTACGCGGGGATGCAGCACTACACAGCAGCCTA
CCCAGCAGCCTACAGCCTGGTTGCACCTGCGTTCCCGCAGCCTCCAGCCCTGGTCGCCCA
GCAGCCCCCACCACCACCTCAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCA
GCAAAGAGAAGGCCCTGATGGCTGCAACATCTTCATCTACCACCTGCCCCAGGAGTTCAC
TGACTCAGAGATCCTCCAGATGTTTGTCCCCTTTGGCCACGTCATCTCAGCCAAAGTCTT
TGTTGACCGAGCCACCAATCAAAGCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGC
CAGTGCCCAGGCTGCCATCCAGGCCATGAATGGCTTCCAGATCGGCATGAAGCGCCTCAA
AGTCCAGCTAAAGCGGCCTAAGGATGCCAACCGGCCCTACGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT