POU6F2 ORF clone pFN21AB6256

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB6256

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Clone info.

Species

human

Clone Name

pFN21AB6256 Sequence (with vector) Restriction Map

Product ID

FHC11729

Flexi Clone PID

FXC11729

ORF Sequence

DNA sequence (2049 bp)
Protein sequence (683 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529191]

Gene

KIBB6256

Symbol

POU6F2

Alias : RPF-1, WT5, WTSL

Description

POU class 6 homeobox 2

Original Clone ID

cs00856

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 2049 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 683 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34620.2 2.5e-90 100.0 POU6F2 CCDS55103.1 3.1e-67 94.7 POU6F2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR013847 487 504 PR00028 POU IPR013847 510 523 PR00028 POU IPR013847 562 577 PR00028 POU IPR013847 598 618 PR00028 POU IPR013847 633 648 PR00028 POU HMMPfam IPR000327 470 517 PF00157 POU-specific IPR000327 552 578 PF00157 POU-specific IPR001356 600 655 PF00046 Homeobox HMMSmart IPR000327 468 578 SM00352 POU-specific IPR001356 599 661 SM00389 Homeobox ProfileScan IPR000327 468 578 PS51179 POU-specific IPR001356 597 657 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_009183 691 601583,609062 100.0 100.0 XP_011513415 720 601583,609062 100.0 100.0 NP_001159490 655 601583,609062 94.7 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB6256 Download

>KIBB6256  2049 bp
ATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAG
TTGAGAGGTGAGGACAAGGCTGCTACTTCAGACAGCGAGCTGAATGAGCCCCTGCTTGCG
CCTGTGGAATCAAATGACAGCGAGGACACTCCCAGCAAGCTCTTCGGGGCTAGAGGAAAC
CCAGCATTATCAGACCCAGGCACTCCTGACCAACACCAGGCCAGTCAGACCCACCCCCCA
TTTCCAGTTGGGCCACAGCCACTTCTGACGGCACAGCAGTTAGCTTCTGCTGTGGCCGGC
GTGATGCCGGGAGGCCCCCCAGCCCTCAACCAGCCAATCCTCATTCCCTTCAACATGGCG
GGACAGCTAGGAGGCCAGCAAGGACTGGTTCTCACACTGCCAACAGCGAATCTCACCAAC
ATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGGCATTATGACTCTGCCACTGCAAAAT
CTACAAGCTACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCC
CCACAGGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCCCACCCCACCCCAGCAGCCA
CCACCCGCCTCTCAGCAGCCGCCAGCTCCTACATCTCAGCTGCAACAGGCGCCTCAGCCC
CAGCAGCACCAACCCCACTCCCACTCCCAGAACCAGAACCAACCATCTCCAACCCAGCAG
AGCTCCAGCCCCCCGCAGAAACCTAGTCAGTCTCCAGGACATGGCCTGCCTTCACCGCTC
ACGCCACCCAATCCTCTACAGCTGGTTAATAATCCACTAGCAAGTCAGGCTGCAGCGGCT
GCAGCAGCCATGAGCTCCATAGCAAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTCTT
CAGGGGGTCACAGGTCAACTAGTTACTAATGCACAAGGACAGATTATCGGGACCATTCCA
CTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAAGTG
CAGCCAATCACCCCCCAGCTCCTCACAAACGCCCAGGGCCAGATCATCGCCACAGTCATT
GGGAACCAGATCCTGCCCGTGATCAACACCCAGGGCATCACGCTGTCACCCATCAAGCCC
GGCCAGCAGCTCCACCAACCCTCCCAGACGTCAGTGGGTCAAGCAGCCTCCCAAGGCAAC
CTTCTGCACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCAGGCTTCC
TCTTCTTCCTCCTCATCCTCCTCTTCTTCAGCTTTGAGCGTGGGCCAGTTAGTCAGCAAT
CCTCAAACGGCAGCGGGTGAGGTGGATGGGGTTAATCTGGAGGAGATCCGAGAATTTGCC
AAAGCTTTTAAAATCCGGCGCCTGTCCCTTGGCCTGACCCAGACTCAGGTGGGACAGGCT
CTCAGTGCTACAGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAGACACACCATCCTG
AGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGAGAACACTATAGCTAGCAGTCTGACA
GCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGGACATCACCCCT
AAAAGTGCCCAGAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGC
CATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
AAGCGGCGCACCTCCTTCACACCCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGAAG
AACACACACCCTTCTGGGCAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGA
GAAGTAGTTAGAGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGC
TTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAGACTCTCTGGAA
GAAAACTCC

ORF Protein

Cloned ORF protein sequence for pFN21AB6256 Download

>KIBB6256  683 aa
MIAGQVSKPLLSVRSEMNAELRGEDKAATSDSELNEPLLAPVESNDSEDTPSKLFGARGN
PALSDPGTPDQHQASQTHPPFPVGPQPLLTAQQLASAVAGVMPGGPPALNQPILIPFNMA
GQLGGQQGLVLTLPTANLTNIQGLVAAAAAGGIMTLPLQNLQATSSLNSQLQQLQLQLQQ
QQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAPTSQLQQAPQP
QQHQPHSHSQNQNQPSPTQQSSSPPQKPSQSPGHGLPSPLTPPNPLQLVNNPLASQAAAA
AAAMSSIASSQAFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNPGPSSQAASGTQGLQV
QPITPQLLTNAQGQIIATVIGNQILPVINTQGITLSPIKPGQQLHQPSQTSVGQAASQGN
LLHLAHSQASMSQSPVRQASSSSSSSSSSSALSVGQLVSNPQTAAGEVDGVNLEEIREFA
KAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILRSHFFLPQEAQENTIASSLT
AKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEARHRAGMQNLTEFIGSEPSKKR
KRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKR
LKQHEPATAVPLEPLTDSLEENS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB6256 Download

>pFN21AB6256  6754 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTC
AGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGGACAAGGCTGCTACTTCAGACAG
CGAGCTGAATGAGCCCCTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACACTCCCAG
CAAGCTCTTCGGGGCTAGAGGAAACCCAGCATTATCAGACCCAGGCACTCCTGACCAACA
CCAGGCCAGTCAGACCCACCCCCCATTTCCAGTTGGGCCACAGCCACTTCTGACGGCACA
GCAGTTAGCTTCTGCTGTGGCCGGCGTGATGCCGGGAGGCCCCCCAGCCCTCAACCAGCC
AATCCTCATTCCCTTCAACATGGCGGGACAGCTAGGAGGCCAGCAAGGACTGGTTCTCAC
ACTGCCAACAGCGAATCTCACCAACATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGG
CATTATGACTCTGCCACTGCAAAATCTACAAGCTACCTCATCCCTGAACTCCCAGCTCCA
GCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTC
AACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCAGTCCCAGCAGCAGCCGCT
GCAGCCCACCCCACCCCAGCAGCCACCACCCGCCTCTCAGCAGCCGCCAGCTCCTACATC
TCAGCTGCAACAGGCGCCTCAGCCCCAGCAGCACCAACCCCACTCCCACTCCCAGAACCA
GAACCAACCATCTCCAACCCAGCAGAGCTCCAGCCCCCCGCAGAAACCTAGTCAGTCTCC
AGGACATGGCCTGCCTTCACCGCTCACGCCACCCAATCCTCTACAGCTGGTTAATAATCC
ACTAGCAAGTCAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGCAAGCTCACAGGC
CTTTGGCAATGCCCTCTCCAGTCTTCAGGGGGTCACAGGTCAACTAGTTACTAATGCACA
AGGACAGATTATCGGGACCATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGC
AAGCGGCACTCAGGGCTTGCAAGTGCAGCCAATCACCCCCCAGCTCCTCACAAACGCCCA
GGGCCAGATCATCGCCACAGTCATTGGGAACCAGATCCTGCCCGTGATCAACACCCAGGG
CATCACGCTGTCACCCATCAAGCCCGGCCAGCAGCTCCACCAACCCTCCCAGACGTCAGT
GGGTCAAGCAGCCTCCCAAGGCAACCTTCTGCACCTGGCTCACAGCCAAGCATCCATGTC
TCAAAGTCCCGTCCGGCAGGCTTCCTCTTCTTCCTCCTCATCCTCCTCTTCTTCAGCTTT
GAGCGTGGGCCAGTTAGTCAGCAATCCTCAAACGGCAGCGGGTGAGGTGGATGGGGTTAA
TCTGGAGGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCGGCGCCTGTCCCTTGGCCT
GACCCAGACTCAGGTGGGACAGGCTCTCAGTGCTACAGAGGGCCCCGCGTACAGCCAGTC
GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA
GAACACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAG
GTTTGAAAAGCTGGACATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGTGCTTGAGCG
GTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTAT
CGGGAGTGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTGA
GATCCTCAATGCCCACTTTGAGAAGAACACACACCCTTCTGGGCAGGAAATGACCGAAAT
TGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGCAATAAGAGGCA
AGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
GGAGCCCTTAACAGACTCTCTGGAAGAAAACTCCGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT