IRX4 ORF clone pFN21AB5973

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB5973

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Clone info.

Species

human

Clone Name

pFN21AB5973 Sequence (with vector) Restriction Map

Product ID

FHC03449

Flexi Clone PID

FXC03449

ORF Sequence

DNA sequence (1557 bp)
Protein sequence (519 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527533]

Gene

KIBB5973

Symbol

IRX4

Alias : IRXA3

Description

iroquois homeobox 4, transcript variant 5

Original Clone ID

cs00673

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1557 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 519 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3867.1 8.9e-139 100.0 IRX4 CCDS75225.1 3.7e-101 95.2 IRX4 CCDS32449.1 1.4e-30 44.1 IRX6 CCDS10750.1 2e-23 36.7 IRX3 CCDS10751.1 2.2e-23 38.9 IRX5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001356 145 202 PF00046 Homeobox HMMSmart IPR001356 142 207 SM00389 Homeobox IPR003893 361 378 SM00548 Iroquois-class homeodomain protein ProfileScan IPR001356 140 203 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057442 519 606199 100.0 100.0 NP_001265561 519 606199 100.0 100.0 NP_001265563 519 606199 100.0 100.0 NP_001265562 545 606199 95.2 100.0 NP_001265564 545 606199 95.2 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5973 Download

>KIBB5973  1557 bp
ATGTCCTACCCGCAGTTTGGATACCCCTACTCCTCGGCTCCCCAGTTCTTGATGGCCACC
AACTCCCTGAGCACGTGCTGCGAGTCCGGAGGCCGCACGCTGGCGGACTCCGGGCCCGCC
GCCTCGGCCCAGGCGCCGGTCTACTGCCCGGTCTACGAGAGCCGGCTGCTGGCCACCGCG
CGCCACGAGCTCAACTCGGCCGCGGCGCTGGGCGTCTATGGGGGTCCCTATGGCGGATCG
CAGGGCTATGGCAACTACGTGACCTACGGCTCGGAGGCGTCCGCCTTCTACTCGCTGAAC
AGCTTTGATTCCAAGGATGGTTCGGGATCTGCGCATGGGGGCCTGGCACCAGCCGCTGCC
GCCTACTACCCTTACGAGCCAGCTCTGGGCCAGTACCCCTATGACAGGTATGGAACCATG
GACAGCGGCACGCGGCGCAAGAACGCCACGCGCGAGACCACCAGCACGCTCAAGGCCTGG
CTGCAGGAGCACCGCAAGAACCCCTACCCCACCAAGGGCGAGAAGATCATGCTGGCCATC
ATCACCAAGATGACCCTCACACAGGTCTCCACCTGGTTCGCCAACGCGCGCCGGCGCCTC
AAGAAGGAGAACAAGATGACGTGGCCGCCGCGGAACAAGTGCGCAGACGAGAAGCGGCCC
TACGCGGAGGGCGAGGAGGAGGAGGGGGGCGAGGAGGAGGCGCGGGAGGAGCCCCTCAAG
AGCTCCAAGAACGCAGAGCCCGTGGGCAAAGAGGAGAAGGAGCTGGAGCTTAGTGACTTG
GACGACTTCGACCCGCTGGAAGCAGAGCCGCCGGCGTGCGAGCTGAAGCCGCCCTTCCAC
TCCCTGGACGGCGGTCTGGAGCGCGTCCCCGCCGCGCCCGACGGCCCGGTCAAGGAGGCC
TCAGGCGCGCTCCGGATGTCTCTGGCCGCGGGTGGCGGAGCTGCTCTGGACGAGGACCTG
GAGAGGGCCCGGAGCTGTCTCCGCAGCGCGGCGGCCGGGCCGGAGCCACTGCCGGGCGCA
GAGGGCGGCCCTCAGGTCTGCGAGGCCAAGCTGGGGTTTGTGCCGGCGGGGGCGTCGGCA
GGCCTGGAGGCTAAGCCGCGTATCTGGTCCCTGGCCCACACAGCCACCGCCGCTGCCGCC
GCCGCCACCTCCCTGAGCCAGACTGAGTTTCCGTCGTGCATGCTCAAGCGCCAAGGTCCC
GCGGCCCCTGCGGCTGTGTCCTCCGCGCCCGCCACGTCCCCGTCTGTGGCCCTTCCCCAC
TCTGGCGCCCTGGACAGGCACCAGGACTCCCCGGTAACCAGTCTCAGAAACTGGGTGGAC
GGGGTCTTCCACGACCCCATCCTCAGGCACAGCACTTTGAACCAGGCCTGGGCCACCGCC
AAGGGCGCCCTCCTGGACCCCGGGCCTCTGGGACGCTCGCTGGGGGCGGGCGCGAACGTG
CTGACTGCACCCCTGGCCCGCGCCTTTCCGCCTGCCGTGCCCCAGGACGCCCCAGCTGCA
GGCGCCGCCAGGGAGCTGCTCGCCCTGCCCAAGGCCGGCGGCAAACCCTTCTGCGCC

ORF Protein

Cloned ORF protein sequence for pFN21AB5973 Download

>KIBB5973  519 aa
MSYPQFGYPYSSAPQFLMATNSLSTCCESGGRTLADSGPAASAQAPVYCPVYESRLLATA
RHELNSAAALGVYGGPYGGSQGYGNYVTYGSEASAFYSLNSFDSKDGSGSAHGGLAPAAA
AYYPYEPALGQYPYDRYGTMDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAI
ITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADEKRPYAEGEEEEGGEEEAREEPLK
SSKNAEPVGKEEKELELSDLDDFDPLEAEPPACELKPPFHSLDGGLERVPAAPDGPVKEA
SGALRMSLAAGGGAALDEDLERARSCLRSAAAGPEPLPGAEGGPQVCEAKLGFVPAGASA
GLEAKPRIWSLAHTATAAAAAATSLSQTEFPSCMLKRQGPAAPAAVSSAPATSPSVALPH
SGALDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWATAKGALLDPGPLGRSLGAGANV
LTAPLARAFPPAVPQDAPAAGAARELLALPKAGGKPFCA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5973 Download

>pFN21AB5973  6262 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCCTACCCGCAGTTTGGATACCCCTACTCCTC
GGCTCCCCAGTTCTTGATGGCCACCAACTCCCTGAGCACGTGCTGCGAGTCCGGAGGCCG
CACGCTGGCGGACTCCGGGCCCGCCGCCTCGGCCCAGGCGCCGGTCTACTGCCCGGTCTA
CGAGAGCCGGCTGCTGGCCACCGCGCGCCACGAGCTCAACTCGGCCGCGGCGCTGGGCGT
CTATGGGGGTCCCTATGGCGGATCGCAGGGCTATGGCAACTACGTGACCTACGGCTCGGA
GGCGTCCGCCTTCTACTCGCTGAACAGCTTTGATTCCAAGGATGGTTCGGGATCTGCGCA
TGGGGGCCTGGCACCAGCCGCTGCCGCCTACTACCCTTACGAGCCAGCTCTGGGCCAGTA
CCCCTATGACAGGTATGGAACCATGGACAGCGGCACGCGGCGCAAGAACGCCACGCGCGA
GACCACCAGCACGCTCAAGGCCTGGCTGCAGGAGCACCGCAAGAACCCCTACCCCACCAA
GGGCGAGAAGATCATGCTGGCCATCATCACCAAGATGACCCTCACACAGGTCTCCACCTG
GTTCGCCAACGCGCGCCGGCGCCTCAAGAAGGAGAACAAGATGACGTGGCCGCCGCGGAA
CAAGTGCGCAGACGAGAAGCGGCCCTACGCGGAGGGCGAGGAGGAGGAGGGGGGCGAGGA
GGAGGCGCGGGAGGAGCCCCTCAAGAGCTCCAAGAACGCAGAGCCCGTGGGCAAAGAGGA
GAAGGAGCTGGAGCTTAGTGACTTGGACGACTTCGACCCGCTGGAAGCAGAGCCGCCGGC
GTGCGAGCTGAAGCCGCCCTTCCACTCCCTGGACGGCGGTCTGGAGCGCGTCCCCGCCGC
GCCCGACGGCCCGGTCAAGGAGGCCTCAGGCGCGCTCCGGATGTCTCTGGCCGCGGGTGG
CGGAGCTGCTCTGGACGAGGACCTGGAGAGGGCCCGGAGCTGTCTCCGCAGCGCGGCGGC
CGGGCCGGAGCCACTGCCGGGCGCAGAGGGCGGCCCTCAGGTCTGCGAGGCCAAGCTGGG
GTTTGTGCCGGCGGGGGCGTCGGCAGGCCTGGAGGCTAAGCCGCGTATCTGGTCCCTGGC
CCACACAGCCACCGCCGCTGCCGCCGCCGCCACCTCCCTGAGCCAGACTGAGTTTCCGTC
GTGCATGCTCAAGCGCCAAGGTCCCGCGGCCCCTGCGGCTGTGTCCTCCGCGCCCGCCAC
GTCCCCGTCTGTGGCCCTTCCCCACTCTGGCGCCCTGGACAGGCACCAGGACTCCCCGGT
AACCAGTCTCAGAAACTGGGTGGACGGGGTCTTCCACGACCCCATCCTCAGGCACAGCAC
TTTGAACCAGGCCTGGGCCACCGCCAAGGGCGCCCTCCTGGACCCCGGGCCTCTGGGACG
CTCGCTGGGGGCGGGCGCGAACGTGCTGACTGCACCCCTGGCCCGCGCCTTTCCGCCTGC
CGTGCCCCAGGACGCCCCAGCTGCAGGCGCCGCCAGGGAGCTGCTCGCCCTGCCCAAGGC
CGGCGGCAAACCCTTCTGCGCCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT