RLIM ORF clone pFN21AB5545

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB5545

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Clone info.

Species

human

Clone Name

pFN21AB5545 Sequence (with vector) Restriction Map

Product ID

FHC10005

Flexi Clone PID

FXC10005

ORF Sequence

DNA sequence (1872 bp)
Protein sequence (624 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587388]

Gene

KIBB5545

Symbol

RLIM

Alias : MRX61, NY-REN-43, RNF12, TOKAS

Description

ring finger protein, LIM domain interacting, transcript variant 1

Original Clone ID

ef03966

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1872 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 624 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14427.1 1.8e-130 100.0 RLIM CCDS9316.1 7.9e-13 41.7 RNF6 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 570 610 PF00097 Zinc finger HMMSmart IPR001841 570 610 SM00184 Zinc finger ProfileScan IPR001841 570 611 PS50089 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057204 624 300379,300978 100.0 100.0 NP_899196 624 300379,300978 100.0 100.0 XP_005266542 685 133239,604242 41.7 92.8 XP_005266543 685 133239,604242 41.7 92.8 XP_011533479 685 133239,604242 41.7 92.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5545 Download

>KIBB5545  1872 bp
ATGGAAAACTCAGATTCCAATGACAAAGGAAGTGGTGATCAGTCTGCAGCACAGCGCAGA
AGTCAGATGGACCGATTGGATCGAGAAGAAGCTTTCTATCAATTTGTAAATAACCTGAGT
GAAGAAGATTATAGGCTTATGAGAGATAACAATTTGCTAGGCACCCCAGGTGAAAGTACT
GAGGAAGAGTTGCTGAGACGACTACAGCAAATTAAAGAAGGCCCACCACCGCAAAACTCA
GATGAAAATAGAGGAGGAGACTCTTCAGATGATGTGTCTAATGGTGACTCTATAATAGAC
TGGCTTAACTCTGTCAGACAAACTGGAAATACAACAAGAAGTGGGCAAAGAGGAAACCAA
TCTTGGAGAGCAGTGAGTCGGACTAATCCAAACAGTGGTGATTTCAGATTCAGTTTAGAG
ATAAATGTTAACCGTAATAATGGGAGCCAAAATTCAGAGAATGAAAATGAGCCATCTGCA
AGACGTTCTAGTGGAGAAAATGTGGAAAACAACAGCCAAAGGCAAGTGGAAAACCCACGA
TCTGAATCAACATCTGCAAGGCCATCTAGATCAGAACGAAATTCAACTGAAGCGTTAACA
GAGGTCCCACCTACCAGAGGTCAGAGGAGGGCAAGAAGCAGGAGCCCAGACCATCGGAGA
ACCAGAGCAAGAGCTGAAAGAAGTAGGTCACCTCTGCATCCAATGAGTGAAATTCCACGA
AGATCTCATCATAGTATCTCATCTCAGACTTTTGAACATCCTTTGGTAAATGAGACGGAG
GGAAGTTCTAGAACCCGGCACCATGTGACATTGAGGCAGCAAATATCTGGGCCTGAGTTG
CTAAGTAGAGGTCTTTTTGCAGCTTCTGGAACAAGAAATGCTTCTCAAGGAGCAGGTTCT
TCAGACACAGCTGCCAGTGGTGAATCTACAGGATCAGGACAGAGACCTCCAACCATAGTC
CTTGATCTTCAAGTAAGAAGAGTTCGTCCTGGAGAATATCGGCAGAGAGATAGCATAGCC
AGCAGAACTCGGTCTAGGTCTCAGACACCAAACAACACTGTCACCTATGAAAGTGAACGA
GGAGGTTTTAGGCGTACATTTTCACGTTCTGAGCGGGCAGGTGTGAGAACCTATGTCAGT
ACCATCAGAATTCCCATTCGTAGAATCTTAAATACTGGTTTAAGTGAGACTACATCTGTT
GCAATTCAGACCATGTTAAGGCAGATAATGACAGGTTTTGGTGAGTTAAGCTATTTTATG
TACAGTGATAGCGACTCAGAGCCTACTGGCTCAGTCTCAAATCGAAATATGGAAAGGGCA
GAGTCACGGAGTGGAAGAGGAGGTTCTGGTGGTGGTAGTAGTTCTGGTTCCAGTTCGAGT
TCCAGTTCCAGTTCGAGTTCCAGTTCCAGTTCAAGTTCCAGTTCCAGTCCTAGTTCCAGT
TCCGGTGGTGAAAGTTCAGAAACTAGCTCAGATTTATTTGAAGGCAGTAATGAAGGAAGC
TCATCATCAGGCTCATCAGGTGCCAGGCGAGAGGGTCGACATAGGGCCCCAGTCACATTT
GATGAAAGTGGCTCTTTGCCCTTCCTTAGCCTGGCTCAGTTTTTCCTCTTAAATGAGGAT
GATGATGACCAACCTAGAGGACTCACCAAAGAACAGATTGACAACTTGGCAATGAGAAGT
TTTGGTGAAAATGATGCATTAAAAACCTGTAGTGTTTGCATTACAGAATATACAGAAGGC
AACAAACTTCGTAAACTACCTTGTTCCCATGAGTACCATGTCCACTGCATCGATCGCTGG
TTATCTGAGAATTCTACCTGTCCTATTTGTCGCAGAGCAGTCTTAGCTTCTGGTAACAGA
GAAAGTGTTGTG

ORF Protein

Cloned ORF protein sequence for pFN21AB5545 Download

>KIBB5545  624 aa
MENSDSNDKGSGDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEST
EEELLRRLQQIKEGPPPQNSDENRGGDSSDDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGSQNSENENEPSARRSSGENVENNSQRQVENPR
SESTSARPSRSERNSTEALTEVPPTRGQRRARSRSPDHRRTRARAERSRSPLHPMSEIPR
RSHHSISSQTFEHPLVNETEGSSRTRHHVTLRQQISGPELLSRGLFAASGTRNASQGAGS
SDTAASGESTGSGQRPPTIVLDLQVRRVRPGEYRQRDSIASRTRSRSQTPNNTVTYESER
GGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFM
YSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSS
SGGESSETSSDLFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFLLNED
DDDQPRGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRW
LSENSTCPICRRAVLASGNRESVV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5545 Download

>pFN21AB5545  6577 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAAAACTCAGATTCCAATGACAAAGGAAGTGG
TGATCAGTCTGCAGCACAGCGCAGAAGTCAGATGGACCGATTGGATCGAGAAGAAGCTTT
CTATCAATTTGTAAATAACCTGAGTGAAGAAGATTATAGGCTTATGAGAGATAACAATTT
GCTAGGCACCCCAGGTGAAAGTACTGAGGAAGAGTTGCTGAGACGACTACAGCAAATTAA
AGAAGGCCCACCACCGCAAAACTCAGATGAAAATAGAGGAGGAGACTCTTCAGATGATGT
GTCTAATGGTGACTCTATAATAGACTGGCTTAACTCTGTCAGACAAACTGGAAATACAAC
AAGAAGTGGGCAAAGAGGAAACCAATCTTGGAGAGCAGTGAGTCGGACTAATCCAAACAG
TGGTGATTTCAGATTCAGTTTAGAGATAAATGTTAACCGTAATAATGGGAGCCAAAATTC
AGAGAATGAAAATGAGCCATCTGCAAGACGTTCTAGTGGAGAAAATGTGGAAAACAACAG
CCAAAGGCAAGTGGAAAACCCACGATCTGAATCAACATCTGCAAGGCCATCTAGATCAGA
ACGAAATTCAACTGAAGCGTTAACAGAGGTCCCACCTACCAGAGGTCAGAGGAGGGCAAG
AAGCAGGAGCCCAGACCATCGGAGAACCAGAGCAAGAGCTGAAAGAAGTAGGTCACCTCT
GCATCCAATGAGTGAAATTCCACGAAGATCTCATCATAGTATCTCATCTCAGACTTTTGA
ACATCCTTTGGTAAATGAGACGGAGGGAAGTTCTAGAACCCGGCACCATGTGACATTGAG
GCAGCAAATATCTGGGCCTGAGTTGCTAAGTAGAGGTCTTTTTGCAGCTTCTGGAACAAG
AAATGCTTCTCAAGGAGCAGGTTCTTCAGACACAGCTGCCAGTGGTGAATCTACAGGATC
AGGACAGAGACCTCCAACCATAGTCCTTGATCTTCAAGTAAGAAGAGTTCGTCCTGGAGA
ATATCGGCAGAGAGATAGCATAGCCAGCAGAACTCGGTCTAGGTCTCAGACACCAAACAA
CACTGTCACCTATGAAAGTGAACGAGGAGGTTTTAGGCGTACATTTTCACGTTCTGAGCG
GGCAGGTGTGAGAACCTATGTCAGTACCATCAGAATTCCCATTCGTAGAATCTTAAATAC
TGGTTTAAGTGAGACTACATCTGTTGCAATTCAGACCATGTTAAGGCAGATAATGACAGG
TTTTGGTGAGTTAAGCTATTTTATGTACAGTGATAGCGACTCAGAGCCTACTGGCTCAGT
CTCAAATCGAAATATGGAAAGGGCAGAGTCACGGAGTGGAAGAGGAGGTTCTGGTGGTGG
TAGTAGTTCTGGTTCCAGTTCGAGTTCCAGTTCCAGTTCGAGTTCCAGTTCCAGTTCAAG
TTCCAGTTCCAGTCCTAGTTCCAGTTCCGGTGGTGAAAGTTCAGAAACTAGCTCAGATTT
ATTTGAAGGCAGTAATGAAGGAAGCTCATCATCAGGCTCATCAGGTGCCAGGCGAGAGGG
TCGACATAGGGCCCCAGTCACATTTGATGAAAGTGGCTCTTTGCCCTTCCTTAGCCTGGC
TCAGTTTTTCCTCTTAAATGAGGATGATGATGACCAACCTAGAGGACTCACCAAAGAACA
GATTGACAACTTGGCAATGAGAAGTTTTGGTGAAAATGATGCATTAAAAACCTGTAGTGT
TTGCATTACAGAATATACAGAAGGCAACAAACTTCGTAAACTACCTTGTTCCCATGAGTA
CCATGTCCACTGCATCGATCGCTGGTTATCTGAGAATTCTACCTGTCCTATTTGTCGCAG
AGCAGTCTTAGCTTCTGGTAACAGAGAAAGTGTTGTGGTTTAAACGAATTCGGGCTCGGT
ACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAG
CCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTG
GGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACT
AGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTA
ACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAG
GTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAA
ATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAG
CTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCT
TAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAA
TATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTT
GCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCT
GAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATC
CTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTA
TGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACAC
TATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGC
ATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAAC
TTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGG
GATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGAC
GAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGC
GAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTT
GCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA
GCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCC
CGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAG
ATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCG
ACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGG
ATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGG
CCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGAC
GCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTG
GAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCT
TTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGG
TGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCT
GCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCAC
TGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGT
TCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTC
TGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGAT
TTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCAC
GTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGT
CCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAA
TGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTA
TTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCA
TTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAG
GGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACT
CCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT