HNRNPR ORF clone pFN21AB5396

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Halotag ORF Clone pFN21AB5396

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Clone info.

Species

human

Clone Name

pFN21AB5396 Sequence (with vector) Restriction Map

Product ID

FHC01516

Flexi Clone PID

FXC01516

Original Clone PID

ORK01516

ORF Sequence

DNA sequence (1899 bp)
Protein sequence (633 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385093]

Gene

KIBB5396

Symbol

HNRNPR

Alias : HNRPR, hnRNP-R

Description

heterogeneous nuclear ribonucleoprotein R, transcript variant 2

Original Clone ID

bm04652

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1899 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 633 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS232.1 8.6e-122 100.0 HNRNPR CCDS44085.1 2.5e-121 99.5 HNRNPR CCDS60020.1 9.9e-103 99.4 HNRNPR CCDS5005.1 3.4e-98 82.1 SYNCRIP CCDS72727.1 9.2e-91 94.0 HNRNPR The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 167 231 PF00076 RNA recognition motif domain IPR000504 248 309 PF00076 RNA recognition motif domain IPR000504 343 404 PF00076 RNA recognition motif domain HMMSmart IPR000504 166 240 SM00360 RNA recognition motif domain IPR000504 247 324 SM00360 RNA recognition motif domain IPR000504 342 407 SM00360 RNA recognition motif domain HMMTigr IPR006535 106 628 TIGR01648 HnRNP R/Q splicing factor ProfileScan IPR000504 165 244 PS50102 RNA recognition motif domain IPR000504 246 328 PS50102 RNA recognition motif domain IPR000504 341 411 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005817 633 607201 100.0 100.0 XP_005245768 633 607201 100.0 100.0 XP_011538773 636 607201 99.5 100.0 NP_001095868 636 607201 99.5 100.0 NP_001095867 532 607201 100.0 84.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5396 Download

>KIBB5396  1899 bp
ATGGCTAATCAGGTGAATGGTAATGCGGTACAGTTAAAAGAAGAGGAAGAACCAATGGAT
ACTTCCAGTGTAACTCACACAGAACACTACAAGACACTGATAGAGGCAGGCCTCCCACAG
AAGGTGGCAGAAAGACTTGATGAAATATTTCAGACAGGATTGGTAGCTTATGTCGATCTT
GATGAAAGAGCAATTGATGCTCTCAGGGAATTTAATGAAGAAGGAGCTCTGTCTGTACTA
CAGCAGTTCAAGGAAAGTGACTTATCACATGTTCAGAACAAAAGTGCATTTTTATGTGGA
GTTATGAAGACCTACAGGCAGAGAGAGAAACAGGGGAGCAAGGTGCAAGAGTCCACAAAG
GGACCTGATGAAGCGAAGATCAAGGCCTTGCTTGAGAGAACTGGTTATACTCTGGATGTA
ACCACAGGACAGAGGAAGTATGGTGGTCCTCCACCAGACAGTGTGTACTCTGGCGTGCAA
CCTGGAATTGGAACGGAGGTATTTGTAGGCAAAATACCAAGGGATTTATATGAGGATGAG
TTGGTGCCCCTTTTTGAGAAGGCCGGACCCATTTGGGATCTACGTCTTATGATGGATCCA
CTGTCCGGTCAGAATAGAGGGTATGCATTTATCACCTTCTGTGGAAAGGAAGCTGCACAG
GAAGCCGTGAAACTGTGTGACAGCTATGAAATTCGCCCTGGTAAACACCTTGGAGTGTGC
ATTTCTGTGGCAAACAACAGACTTTTTGTTGGATCCATTCCGAAGAATAAGACTAAAGAA
AACATTTTGGAAGAATTCAGTAAAGTCACAGAGGGTTTGGTGGACGTTATTCTCTATCAT
CAACCCGATGACAAAAAGAAGAATCGGGGGTTCTGCTTCCTTGAATATGAGGATCACAAG
TCAGCAGCACAAGCCAGACGCCGGCTGATGAGTGGAAAAGTAAAAGTGTGGGGAAATGTA
GTTACAGTTGAATGGGCTGACCCTGTGGAAGAACCAGATCCAGAAGTCATGGCTAAGGTA
AAAGTTTTGTTTGTGAGAAACTTGGCTACTACGGTGACAGAAGAAATATTGGAAAAGTCA
TTTTCTGAATTTGGAAAACTCGAAAGAGTAAAGAAGTTGAAAGATTATGCATTTGTTCAT
TTTGAAGACAGAGGAGCAGCTGTTAAGGCTATGGATGAAATGAATGGCAAAGAAATAGAA
GGGGAAGAAATTGAAATAGTCTTAGCCAAGCCACCAGACAAGAAAAGGAAAGAGCGCCAA
GCTGCTAGACAGGCCTCCAGAAGCACTGCGTATGAAGATTATTACTACCACCCTCCTCCT
CGCATGCCACCTCCAATTAGAGGTCGGGGTCGTGGTGGGGGGAGAGGTGGATATGGCTAC
CCTCCAGATTACTACGGCTATGAAGATTACTATGATGATTACTATGGTTATGATTATCAC
GACTATCGTGGAGGCTATGAAGATCCCTACTACGGCTATGATGATGGCTATGCAGTAAGA
GGAAGAGGAGGAGGAAGGGGAGGGCGAGGTGCTCCACCACCACCAAGGGGGAGGGGAGCA
CCACCTCCAAGAGGTAGAGCTGGCTATTCACAGAGGGGGGCACCTTTGGGACCACCAAGA
GGCTCTAGGGGTGGCAGAGGGGGTCCTGCTCAACAGCAGAGAGGCCGTGGTTCCCGTGGA
TCTCGGGGCAATCGTGGGGGCAATGTAGGAGGCAAGAGAAAGGCAGATGGGTACAACCAG
CCTGATTCCAAGCGTCGTCAGACCAACAACCAACAGAACTGGGGTTCCCAACCCATCGCT
CAGCAGCCGCTTCAGCAAGGTGGTGACTATTCTGGTAACTATGGTTACAATAATGACAAC
CAGGAATTTTATCAGGATACTTATGGGCAACAGTGGAAG

ORF Protein

Cloned ORF protein sequence for pFN21AB5396 Download

>KIBB5396  633 aa
MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDL
DERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTK
GPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDE
LVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVC
ISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHK
SAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKS
FSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQ
AARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYH
DYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPR
GSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIA
QQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5396 Download

>pFN21AB5396  6604 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTAATCAGGTGAATGGTAATGCGGTACAGTT
AAAAGAAGAGGAAGAACCAATGGATACTTCCAGTGTAACTCACACAGAACACTACAAGAC
ACTGATAGAGGCAGGCCTCCCACAGAAGGTGGCAGAAAGACTTGATGAAATATTTCAGAC
AGGATTGGTAGCTTATGTCGATCTTGATGAAAGAGCAATTGATGCTCTCAGGGAATTTAA
TGAAGAAGGAGCTCTGTCTGTACTACAGCAGTTCAAGGAAAGTGACTTATCACATGTTCA
GAACAAAAGTGCATTTTTATGTGGAGTTATGAAGACCTACAGGCAGAGAGAGAAACAGGG
GAGCAAGGTGCAAGAGTCCACAAAGGGACCTGATGAAGCGAAGATCAAGGCCTTGCTTGA
GAGAACTGGTTATACTCTGGATGTAACCACAGGACAGAGGAAGTATGGTGGTCCTCCACC
AGACAGTGTGTACTCTGGCGTGCAACCTGGAATTGGAACGGAGGTATTTGTAGGCAAAAT
ACCAAGGGATTTATATGAGGATGAGTTGGTGCCCCTTTTTGAGAAGGCCGGACCCATTTG
GGATCTACGTCTTATGATGGATCCACTGTCCGGTCAGAATAGAGGGTATGCATTTATCAC
CTTCTGTGGAAAGGAAGCTGCACAGGAAGCCGTGAAACTGTGTGACAGCTATGAAATTCG
CCCTGGTAAACACCTTGGAGTGTGCATTTCTGTGGCAAACAACAGACTTTTTGTTGGATC
CATTCCGAAGAATAAGACTAAAGAAAACATTTTGGAAGAATTCAGTAAAGTCACAGAGGG
TTTGGTGGACGTTATTCTCTATCATCAACCCGATGACAAAAAGAAGAATCGGGGGTTCTG
CTTCCTTGAATATGAGGATCACAAGTCAGCAGCACAAGCCAGACGCCGGCTGATGAGTGG
AAAAGTAAAAGTGTGGGGAAATGTAGTTACAGTTGAATGGGCTGACCCTGTGGAAGAACC
AGATCCAGAAGTCATGGCTAAGGTAAAAGTTTTGTTTGTGAGAAACTTGGCTACTACGGT
GACAGAAGAAATATTGGAAAAGTCATTTTCTGAATTTGGAAAACTCGAAAGAGTAAAGAA
GTTGAAAGATTATGCATTTGTTCATTTTGAAGACAGAGGAGCAGCTGTTAAGGCTATGGA
TGAAATGAATGGCAAAGAAATAGAAGGGGAAGAAATTGAAATAGTCTTAGCCAAGCCACC
AGACAAGAAAAGGAAAGAGCGCCAAGCTGCTAGACAGGCCTCCAGAAGCACTGCGTATGA
AGATTATTACTACCACCCTCCTCCTCGCATGCCACCTCCAATTAGAGGTCGGGGTCGTGG
TGGGGGGAGAGGTGGATATGGCTACCCTCCAGATTACTACGGCTATGAAGATTACTATGA
TGATTACTATGGTTATGATTATCACGACTATCGTGGAGGCTATGAAGATCCCTACTACGG
CTATGATGATGGCTATGCAGTAAGAGGAAGAGGAGGAGGAAGGGGAGGGCGAGGTGCTCC
ACCACCACCAAGGGGGAGGGGAGCACCACCTCCAAGAGGTAGAGCTGGCTATTCACAGAG
GGGGGCACCTTTGGGACCACCAAGAGGCTCTAGGGGTGGCAGAGGGGGTCCTGCTCAACA
GCAGAGAGGCCGTGGTTCCCGTGGATCTCGGGGCAATCGTGGGGGCAATGTAGGAGGCAA
GAGAAAGGCAGATGGGTACAACCAGCCTGATTCCAAGCGTCGTCAGACCAACAACCAACA
GAACTGGGGTTCCCAACCCATCGCTCAGCAGCCGCTTCAGCAAGGTGGTGACTATTCTGG
TAACTATGGTTACAATAATGACAACCAGGAATTTTATCAGGATACTTATGGGCAACAGTG
GAAGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT