HNRNPR ORF clone FXC01516

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Flexi ORF Clone FXC01516

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Clone info.

Species

human

Clone Name

pF1KB5396 Sequence (with vector) Restriction Map

Product ID

FXC01516

HaloTag Clone PID

FHC01516

Original Clone PID

ORK01516

ORF Sequence

DNA sequence (1899 bp)
Protein sequence (633 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385093]

Gene

KIBB5396

Symbol

HNRNPR

Alias : HNRPR, hnRNP-R

Description

heterogeneous nuclear ribonucleoprotein R, transcript variant 2

Original Clone ID

bm04652

Features of the cloned ORF sequence

Description

Length: 1899 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 633 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS232.1 8.6e-122 100.0 HNRNPR CCDS44085.1 2.5e-121 99.5 HNRNPR CCDS60020.1 9.9e-103 99.4 HNRNPR CCDS5005.1 3.4e-98 82.1 SYNCRIP CCDS72727.1 9.2e-91 94.0 HNRNPR The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 167 231 PF00076 RNA recognition motif domain IPR000504 248 309 PF00076 RNA recognition motif domain IPR000504 343 404 PF00076 RNA recognition motif domain HMMSmart IPR000504 166 240 SM00360 RNA recognition motif domain IPR000504 247 324 SM00360 RNA recognition motif domain IPR000504 342 407 SM00360 RNA recognition motif domain HMMTigr IPR006535 106 628 TIGR01648 HnRNP R/Q splicing factor ProfileScan IPR000504 165 244 PS50102 RNA recognition motif domain IPR000504 246 328 PS50102 RNA recognition motif domain IPR000504 341 411 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005817 633 607201 100.0 100.0 XP_005245768 633 607201 100.0 100.0 XP_011538773 636 607201 99.5 100.0 NP_001095868 636 607201 99.5 100.0 NP_001095867 532 607201 100.0 84.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5396 Download

>KIBB5396  1899 bp
ATGGCTAATCAGGTGAATGGTAATGCGGTACAGTTAAAAGAAGAGGAAGAACCAATGGAT
ACTTCCAGTGTAACTCACACAGAACACTACAAGACACTGATAGAGGCAGGCCTCCCACAG
AAGGTGGCAGAAAGACTTGATGAAATATTTCAGACAGGATTGGTAGCTTATGTCGATCTT
GATGAAAGAGCAATTGATGCTCTCAGGGAATTTAATGAAGAAGGAGCTCTGTCTGTACTA
CAGCAGTTCAAGGAAAGTGACTTATCACATGTTCAGAACAAAAGTGCATTTTTATGTGGA
GTTATGAAGACCTACAGGCAGAGAGAGAAACAGGGGAGCAAGGTGCAAGAGTCCACAAAG
GGACCTGATGAAGCGAAGATCAAGGCCTTGCTTGAGAGAACTGGTTATACTCTGGATGTA
ACCACAGGACAGAGGAAGTATGGTGGTCCTCCACCAGACAGTGTGTACTCTGGCGTGCAA
CCTGGAATTGGAACGGAGGTATTTGTAGGCAAAATACCAAGGGATTTATATGAGGATGAG
TTGGTGCCCCTTTTTGAGAAGGCCGGACCCATTTGGGATCTACGTCTTATGATGGATCCA
CTGTCCGGTCAGAATAGAGGGTATGCATTTATCACCTTCTGTGGAAAGGAAGCTGCACAG
GAAGCCGTGAAACTGTGTGACAGCTATGAAATTCGCCCTGGTAAACACCTTGGAGTGTGC
ATTTCTGTGGCAAACAACAGACTTTTTGTTGGATCCATTCCGAAGAATAAGACTAAAGAA
AACATTTTGGAAGAATTCAGTAAAGTCACAGAGGGTTTGGTGGACGTTATTCTCTATCAT
CAACCCGATGACAAAAAGAAGAATCGGGGGTTCTGCTTCCTTGAATATGAGGATCACAAG
TCAGCAGCACAAGCCAGACGCCGGCTGATGAGTGGAAAAGTAAAAGTGTGGGGAAATGTA
GTTACAGTTGAATGGGCTGACCCTGTGGAAGAACCAGATCCAGAAGTCATGGCTAAGGTA
AAAGTTTTGTTTGTGAGAAACTTGGCTACTACGGTGACAGAAGAAATATTGGAAAAGTCA
TTTTCTGAATTTGGAAAACTCGAAAGAGTAAAGAAGTTGAAAGATTATGCATTTGTTCAT
TTTGAAGACAGAGGAGCAGCTGTTAAGGCTATGGATGAAATGAATGGCAAAGAAATAGAA
GGGGAAGAAATTGAAATAGTCTTAGCCAAGCCACCAGACAAGAAAAGGAAAGAGCGCCAA
GCTGCTAGACAGGCCTCCAGAAGCACTGCGTATGAAGATTATTACTACCACCCTCCTCCT
CGCATGCCACCTCCAATTAGAGGTCGGGGTCGTGGTGGGGGGAGAGGTGGATATGGCTAC
CCTCCAGATTACTACGGCTATGAAGATTACTATGATGATTACTATGGTTATGATTATCAC
GACTATCGTGGAGGCTATGAAGATCCCTACTACGGCTATGATGATGGCTATGCAGTAAGA
GGAAGAGGAGGAGGAAGGGGAGGGCGAGGTGCTCCACCACCACCAAGGGGGAGGGGAGCA
CCACCTCCAAGAGGTAGAGCTGGCTATTCACAGAGGGGGGCACCTTTGGGACCACCAAGA
GGCTCTAGGGGTGGCAGAGGGGGTCCTGCTCAACAGCAGAGAGGCCGTGGTTCCCGTGGA
TCTCGGGGCAATCGTGGGGGCAATGTAGGAGGCAAGAGAAAGGCAGATGGGTACAACCAG
CCTGATTCCAAGCGTCGTCAGACCAACAACCAACAGAACTGGGGTTCCCAACCCATCGCT
CAGCAGCCGCTTCAGCAAGGTGGTGACTATTCTGGTAACTATGGTTACAATAATGACAAC
CAGGAATTTTATCAGGATACTTATGGGCAACAGTGGAAG

ORF Protein

Cloned ORF protein sequence for pF1KB5396 Download

>KIBB5396  633 aa
MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDL
DERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTK
GPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDE
LVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVC
ISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHK
SAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKS
FSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQ
AARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYH
DYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPR
GSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIA
QQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5396 Download

>pF1KB5396  5012 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTAATCAG
GTGAATGGTAATGCGGTACAGTTAAAAGAAGAGGAAGAACCAATGGATACTTCCAGTGTA
ACTCACACAGAACACTACAAGACACTGATAGAGGCAGGCCTCCCACAGAAGGTGGCAGAA
AGACTTGATGAAATATTTCAGACAGGATTGGTAGCTTATGTCGATCTTGATGAAAGAGCA
ATTGATGCTCTCAGGGAATTTAATGAAGAAGGAGCTCTGTCTGTACTACAGCAGTTCAAG
GAAAGTGACTTATCACATGTTCAGAACAAAAGTGCATTTTTATGTGGAGTTATGAAGACC
TACAGGCAGAGAGAGAAACAGGGGAGCAAGGTGCAAGAGTCCACAAAGGGACCTGATGAA
GCGAAGATCAAGGCCTTGCTTGAGAGAACTGGTTATACTCTGGATGTAACCACAGGACAG
AGGAAGTATGGTGGTCCTCCACCAGACAGTGTGTACTCTGGCGTGCAACCTGGAATTGGA
ACGGAGGTATTTGTAGGCAAAATACCAAGGGATTTATATGAGGATGAGTTGGTGCCCCTT
TTTGAGAAGGCCGGACCCATTTGGGATCTACGTCTTATGATGGATCCACTGTCCGGTCAG
AATAGAGGGTATGCATTTATCACCTTCTGTGGAAAGGAAGCTGCACAGGAAGCCGTGAAA
CTGTGTGACAGCTATGAAATTCGCCCTGGTAAACACCTTGGAGTGTGCATTTCTGTGGCA
AACAACAGACTTTTTGTTGGATCCATTCCGAAGAATAAGACTAAAGAAAACATTTTGGAA
GAATTCAGTAAAGTCACAGAGGGTTTGGTGGACGTTATTCTCTATCATCAACCCGATGAC
AAAAAGAAGAATCGGGGGTTCTGCTTCCTTGAATATGAGGATCACAAGTCAGCAGCACAA
GCCAGACGCCGGCTGATGAGTGGAAAAGTAAAAGTGTGGGGAAATGTAGTTACAGTTGAA
TGGGCTGACCCTGTGGAAGAACCAGATCCAGAAGTCATGGCTAAGGTAAAAGTTTTGTTT
GTGAGAAACTTGGCTACTACGGTGACAGAAGAAATATTGGAAAAGTCATTTTCTGAATTT
GGAAAACTCGAAAGAGTAAAGAAGTTGAAAGATTATGCATTTGTTCATTTTGAAGACAGA
GGAGCAGCTGTTAAGGCTATGGATGAAATGAATGGCAAAGAAATAGAAGGGGAAGAAATT
GAAATAGTCTTAGCCAAGCCACCAGACAAGAAAAGGAAAGAGCGCCAAGCTGCTAGACAG
GCCTCCAGAAGCACTGCGTATGAAGATTATTACTACCACCCTCCTCCTCGCATGCCACCT
CCAATTAGAGGTCGGGGTCGTGGTGGGGGGAGAGGTGGATATGGCTACCCTCCAGATTAC
TACGGCTATGAAGATTACTATGATGATTACTATGGTTATGATTATCACGACTATCGTGGA
GGCTATGAAGATCCCTACTACGGCTATGATGATGGCTATGCAGTAAGAGGAAGAGGAGGA
GGAAGGGGAGGGCGAGGTGCTCCACCACCACCAAGGGGGAGGGGAGCACCACCTCCAAGA
GGTAGAGCTGGCTATTCACAGAGGGGGGCACCTTTGGGACCACCAAGAGGCTCTAGGGGT
GGCAGAGGGGGTCCTGCTCAACAGCAGAGAGGCCGTGGTTCCCGTGGATCTCGGGGCAAT
CGTGGGGGCAATGTAGGAGGCAAGAGAAAGGCAGATGGGTACAACCAGCCTGATTCCAAG
CGTCGTCAGACCAACAACCAACAGAACTGGGGTTCCCAACCCATCGCTCAGCAGCCGCTT
CAGCAAGGTGGTGACTATTCTGGTAACTATGGTTACAATAATGACAACCAGGAATTTTAT
CAGGATACTTATGGGCAACAGTGGAAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTA
GGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCA
CTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCG
CGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGA
TCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAA
TACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCC
TACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTG
TCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAAC
GGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCT
ACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCC
GGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTG
GTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATG
CTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCT
GGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGA
TAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT