STOML1 ORF clone pFN21AB5185

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB5185

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Clone info.

Species

human

Clone Name

pFN21AB5185 Sequence (with vector) Restriction Map

Product ID

FHC11941

Flexi Clone PID

FXC11941

ORF Sequence

DNA sequence (1194 bp)
Protein sequence (398 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587381]

Gene

KIBB5185

Symbol

STOML1

Alias : SLP-1, STORP, hUNC-24

Description

stomatin (EPB72)-like 1, transcript variant 1

Original Clone ID

cs03079

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1194 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 398 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10254.1 4.5e-138 100.0 STOML1 CCDS58382.1 1.8e-120 99.7 STOML1 CCDS58381.1 1.1e-103 99.7 STOML1 CCDS58385.1 1.2e-90 82.2 STOML1 CCDS58384.1 1.2e-88 87.4 STOML1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001972 84 106 PR00721 Stomatin IPR001972 131 152 PR00721 Stomatin IPR001972 166 183 PR00721 Stomatin IPR001972 186 209 PR00721 Stomatin HMMPfam IPR001107 80 222 PF01145 Band 7 protein IPR003033 300 394 PF02036 SCP2 sterol-binding domain HMMSmart IPR001107 77 242 SM00244 Band 7 protein
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 57 GLISFLGFLLLLVTFPISGWFAL 79 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004800 398 608326 100.0 100.0 NP_001243601 397 608326 99.7 100.0 NP_001311159 356 608326 100.0 88.9 XP_005254849 356 608326 100.0 88.9 XP_006720836 355 608326 99.7 88.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5185 Download

>KIBB5185  1194 bp
ATGCTCGGCAGGTCTGGGTACCGGGCGCTGCCCCTGGGTGATTTTGACCGCTTCCAGCAG
TCGAGCTTCGGCTTTCTGGGCTCGCAGAAGGGCTGCTTGTCCCCGGAGCGGGGCGGCGTG
GGGACAGGGGCCGATGTACCCCAGAGCTGGCCCTCCTGCCTCTGTCATGGCCTCATCAGT
TTCCTGGGGTTCTTGCTGCTGTTGGTCACCTTCCCCATTTCTGGCTGGTTTGCCCTGAAG
ATTGTGCCCACCTACGAGCGGATGATTGTGTTCCGCCTGGGCCGGATCCGCACCCCCCAG
GGACCTGGCATGGTTCTGCTCTTGCCCTTCATTGACTCCTTTCAGAGGGTGGATCTGAGG
ACACGAGCCTTCAACGTCCCTCCCTGCAAGCTGGCCTCTAAGGACGGGGCTGTGCTGTCC
GTGGGAGCCGATGTCCAGTTTCGCATCTGGGACCCGGTGCTGTCGGTGATGACTGTGAAA
GACCTGAACACAGCCACACGCATGACAGCCCAGAACGCCATGACCAAGGCCCTGCTCAAG
AGGCCGCTGCGGGAGATCCAGATGGAGAAGCTCAAGATCAGCGACCAGCTTCTGCTGGAG
ATCAACGATGTGACCAGGGCCTGGGGGCTGGAGGTAGACCGCGTGGAGCTGGCAGTGGAG
GCCGTGCTCCAGCCGCCCCAGGACAGCCCAGCTGGGCCCAACCTGGACAGCACCCTCCAG
CAGCTGGCCCTGCACTTCCTGGGAGGAAGCATGAACTCAATGGCAGGAGGTGCCCCGTCC
CCGGGGCCAGCAGACACCGTGGAGATGGTGAGTGAAGTTGAGCCACCTGCCCCTCAAGTT
GGTGCCAGGTCCAGTCCGAAGCAGCCTCTGGCGGAGGGGCTACTGACTGCTCTACAGCCC
TTCCTGTCTGAGGCCCTGGTCAGCCAAGTCGGGGCCTGCTACCAGTTCAATGTCGTCCTG
CCCAGCGGCACCCAAAGCGCCTACTTCCTGGACCTCACTACAGGACGAGGAAGAGTGGGA
CACGGGGTGCCTGATGGCATCCCTGATGTGGTGGTGGAGATGGCCGAGGCAGACCTGCGG
GCCCTGCTATGCAGAGAGCTGCGGCCCCTGGGGGCCTACATGAGTGGACGGCTGAAGGTG
AAGGGCGACCTGGCTATGGCCATGAAGCTGGAGGCTGTCCTCAGGGCCTTGAAG

ORF Protein

Cloned ORF protein sequence for pFN21AB5185 Download

>KIBB5185  398 aa
MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5185 Download

>pFN21AB5185  5899 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTCGGCAGGTCTGGGTACCGGGCGCTGCCCCT
GGGTGATTTTGACCGCTTCCAGCAGTCGAGCTTCGGCTTTCTGGGCTCGCAGAAGGGCTG
CTTGTCCCCGGAGCGGGGCGGCGTGGGGACAGGGGCCGATGTACCCCAGAGCTGGCCCTC
CTGCCTCTGTCATGGCCTCATCAGTTTCCTGGGGTTCTTGCTGCTGTTGGTCACCTTCCC
CATTTCTGGCTGGTTTGCCCTGAAGATTGTGCCCACCTACGAGCGGATGATTGTGTTCCG
CCTGGGCCGGATCCGCACCCCCCAGGGACCTGGCATGGTTCTGCTCTTGCCCTTCATTGA
CTCCTTTCAGAGGGTGGATCTGAGGACACGAGCCTTCAACGTCCCTCCCTGCAAGCTGGC
CTCTAAGGACGGGGCTGTGCTGTCCGTGGGAGCCGATGTCCAGTTTCGCATCTGGGACCC
GGTGCTGTCGGTGATGACTGTGAAAGACCTGAACACAGCCACACGCATGACAGCCCAGAA
CGCCATGACCAAGGCCCTGCTCAAGAGGCCGCTGCGGGAGATCCAGATGGAGAAGCTCAA
GATCAGCGACCAGCTTCTGCTGGAGATCAACGATGTGACCAGGGCCTGGGGGCTGGAGGT
AGACCGCGTGGAGCTGGCAGTGGAGGCCGTGCTCCAGCCGCCCCAGGACAGCCCAGCTGG
GCCCAACCTGGACAGCACCCTCCAGCAGCTGGCCCTGCACTTCCTGGGAGGAAGCATGAA
CTCAATGGCAGGAGGTGCCCCGTCCCCGGGGCCAGCAGACACCGTGGAGATGGTGAGTGA
AGTTGAGCCACCTGCCCCTCAAGTTGGTGCCAGGTCCAGTCCGAAGCAGCCTCTGGCGGA
GGGGCTACTGACTGCTCTACAGCCCTTCCTGTCTGAGGCCCTGGTCAGCCAAGTCGGGGC
CTGCTACCAGTTCAATGTCGTCCTGCCCAGCGGCACCCAAAGCGCCTACTTCCTGGACCT
CACTACAGGACGAGGAAGAGTGGGACACGGGGTGCCTGATGGCATCCCTGATGTGGTGGT
GGAGATGGCCGAGGCAGACCTGCGGGCCCTGCTATGCAGAGAGCTGCGGCCCCTGGGGGC
CTACATGAGTGGACGGCTGAAGGTGAAGGGCGACCTGGCTATGGCCATGAAGCTGGAGGC
TGTCCTCAGGGCCTTGAAGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT