TRIM23 ORF clone pFN21AB4702

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Halotag ORF Clone pFN21AB4702

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Clone info.

Species

human

Clone Name

pFN21AB4702 Sequence (with vector) Restriction Map

Product ID

FHC01430

Flexi Clone PID

FXC01430

ORF Sequence

DNA sequence (1722 bp)
Protein sequence (574 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384982]

Gene

KIBB4702

Symbol

TRIM23

Alias : ARD1, ARFD1, RNF46

Description

tripartite motif containing 23, transcript variant alpha

Original Clone ID

fk14923

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1722 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 574 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3987.1 5.9e-111 100.0 TRIM23 CCDS43322.1 3.1e-106 100.0 TRIM23 CCDS3986.1 7.9e-104 100.0 TRIM23 CCDS1565.1 1.9e-16 62.8 ARF1 CCDS8774.1 2.2e-16 62.3 ARF3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR006689 406 429 PR00328 ARF/SAR superfamily IPR006689 434 458 PR00328 ARF/SAR superfamily IPR006689 461 486 PR00328 ARF/SAR superfamily IPR006689 506 527 PR00328 ARF/SAR superfamily HMMPfam IPR000315 125 168 PF00643 Zinc finger IPR006689 395 564 PF00025 ARF/SAR superfamily HMMSmart IPR001841 31 75 SM00184 Zinc finger IPR000315 122 168 SM00336 Zinc finger IPR000315 173 219 SM00336 Zinc finger IPR003649 226 370 SM00502 B-box IPR006688 387 569 SM00177 ADP-ribosylation factor IPR006687 389 565 SM00178 Small GTPase SAR1-type IPR003579 405 572 SM00175 Ras small GTPase HMMTigr IPR005225 404 531 TIGR00231 Small GTP-binding protein domain ProfileScan IPR001841 31 76 PS50089 Zinc finger IPR000315 122 168 PS50119 Zinc finger IPR007087 145 172 PS50157 Zinc finger IPR006689 398 565 PS51417 ARF/SAR superfamily
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001647 574 601747 100.0 100.0 XP_016864933 569 601747 100.0 95.8 NP_150230 569 601747 100.0 95.8 NP_150231 546 601747 100.0 94.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB4702 Download

>KIBB4702  1722 bp
ATGGCTACCCTGGTTGTAAACAAGCTCGGAGCGGGAGTAGACAGTGGCCGGCAGGGCAGC
CGGGGGACAGCTGTAGTGAAGGTGCTAGAGTGTGGAGTTTGTGAAGATGTCTTTTCTTTG
CAAGGAGACAAAGTTCCCCGTCTTTTGCTTTGTGGCCATACCGTCTGTCATGACTGTCTC
ACTCGCCTACCTCTTCATGGAAGAGCAATCCGTTGCCCATTTGATCGACAAGTAACAGAC
CTAGGTGATTCAGGTGTCTGGGGATTGAAAAAAAATTTTGCTTTATTGGAGCTTTTGGAA
CGACTGCAGAATGGGCCTATTGGTCAGTATGGAGCTGCAGAAGAATCCATTGGGATATCT
GGAGAGAGCATCATTCGTTGTGATGAAGATGAAGCTCACCTTGCCTCTGTATATTGCACT
GTGTGTGCAACTCATTTGTGCTCTGAGTGTTCTCAAGTTACTCATTCTACAAAGACATTA
GCAAAGCACAGGCGAGTTCCTCTAGCTGATAAACCTCATGAGAAAACTATGTGCTCTCAG
CACCAGGTGCATGCCATTGAGTTTGTTTGCTTGGAAGAAGGTTGTCAAACTAGCCCACTC
ATGTGCTGTGTCTGCAAAGAATATGGAAAACACCAGGGTCACAAGCATTCAGTATTGGAA
CCAGAAGCTAATCAGATCCGAGCATCAATTTTAGATATGGCTCACTGCATACGGACCTTC
ACAGAGGAAATCTCAGATTATTCCAGAAAATTAGTTGGAATTGTGCAGCACATTGAAGGA
GGAGAACAAATCGTGGAAGATGGAATTGGAATGGCTCACACAGAACATGTACCAGGGACT
GCAGAGAATGCCCGGTCATGTATTCGAGCTTATTTTTATGATCTACATGAAACTCTGTGT
CGTCAAGAAGAAATGGCTCTAAGTGTTGTTGATGCTCATGTTCGTGAAAAATTGATTTGG
CTCAGGCAGCAACAAGAAGATATGACTATTTTGTTGTCAGAGGTTTCTGCAGCCTGCCTC
CACTGTGAAAAGACTTTGCAGCAGGATGATTGTAGAGTTGTCTTGGCAAAACAGGAAATT
ACAAGGTTACTGGAAACATTGCAGAAACAGCAGCAGCAGTTTACAGAAGTTGCAGATCAC
ATTCAGTTGGATGCCAGCATCCCTGTCACTTTTACAAAGGATAATCGAGTTCACATTGGA
CCAAAAATGGAAATTCGGGTCGTTACGTTAGGATTGGATGGTGCTGGAAAAACTACTATC
TTGTTTAAGTTAAAACAGGATGAATTCATGCAGCCCATTCCAACAATTGGTTTTAACGTG
GAAACTGTAGAATATAAAAATCTAAAATTCACTATTTGGGATGTAGGTGGAAAACACAAA
TTAAGACCATTGTGGAAACATTATTACCTCAATACTCAAGCTGTTGTGTTTGTTGTAGAT
AGCAGTCATAGAGACAGAATTAGTGAAGCACACAGCGAACTTGCAAAGTTGTTAACGGAA
AAAGAACTCCGAGATGCTCTGCTCCTGATTTTTGCTAACAAACAGGATGTTGCTGGAGCA
CTGTCAGTAGAAGAAATCACTGAACTACTCAGTCTCCATAAATTATGCTGTGGCCGTAGC
TGGTATATTCAGGGCTGTGATGCTCGAAGTGGTATGGGACTGTATGAAGGGTTGGACTGG
CTCTCACGGCAACTTGTAGCTGCTGGAGTATTGGATGTTGCT

ORF Protein

Cloned ORF protein sequence for pFN21AB4702 Download

>KIBB4702  574 aa
MATLVVNKLGAGVDSGRQGSRGTAVVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL
TRLPLHGRAIRCPFDRQVTDLGDSGVWGLKKNFALLELLERLQNGPIGQYGAAEESIGIS
GESIIRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLAKHRRVPLADKPHEKTMCSQ
HQVHAIEFVCLEEGCQTSPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRTF
TEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCIRAYFYDLHETLC
RQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHCEKTLQQDDCRVVLAKQEI
TRLLETLQKQQQQFTEVADHIQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTI
LFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVD
SSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRS
WYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB4702 Download

>pFN21AB4702  6427 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTACCCTGGTTGTAAACAAGCTCGGAGCGGG
AGTAGACAGTGGCCGGCAGGGCAGCCGGGGGACAGCTGTAGTGAAGGTGCTAGAGTGTGG
AGTTTGTGAAGATGTCTTTTCTTTGCAAGGAGACAAAGTTCCCCGTCTTTTGCTTTGTGG
CCATACCGTCTGTCATGACTGTCTCACTCGCCTACCTCTTCATGGAAGAGCAATCCGTTG
CCCATTTGATCGACAAGTAACAGACCTAGGTGATTCAGGTGTCTGGGGATTGAAAAAAAA
TTTTGCTTTATTGGAGCTTTTGGAACGACTGCAGAATGGGCCTATTGGTCAGTATGGAGC
TGCAGAAGAATCCATTGGGATATCTGGAGAGAGCATCATTCGTTGTGATGAAGATGAAGC
TCACCTTGCCTCTGTATATTGCACTGTGTGTGCAACTCATTTGTGCTCTGAGTGTTCTCA
AGTTACTCATTCTACAAAGACATTAGCAAAGCACAGGCGAGTTCCTCTAGCTGATAAACC
TCATGAGAAAACTATGTGCTCTCAGCACCAGGTGCATGCCATTGAGTTTGTTTGCTTGGA
AGAAGGTTGTCAAACTAGCCCACTCATGTGCTGTGTCTGCAAAGAATATGGAAAACACCA
GGGTCACAAGCATTCAGTATTGGAACCAGAAGCTAATCAGATCCGAGCATCAATTTTAGA
TATGGCTCACTGCATACGGACCTTCACAGAGGAAATCTCAGATTATTCCAGAAAATTAGT
TGGAATTGTGCAGCACATTGAAGGAGGAGAACAAATCGTGGAAGATGGAATTGGAATGGC
TCACACAGAACATGTACCAGGGACTGCAGAGAATGCCCGGTCATGTATTCGAGCTTATTT
TTATGATCTACATGAAACTCTGTGTCGTCAAGAAGAAATGGCTCTAAGTGTTGTTGATGC
TCATGTTCGTGAAAAATTGATTTGGCTCAGGCAGCAACAAGAAGATATGACTATTTTGTT
GTCAGAGGTTTCTGCAGCCTGCCTCCACTGTGAAAAGACTTTGCAGCAGGATGATTGTAG
AGTTGTCTTGGCAAAACAGGAAATTACAAGGTTACTGGAAACATTGCAGAAACAGCAGCA
GCAGTTTACAGAAGTTGCAGATCACATTCAGTTGGATGCCAGCATCCCTGTCACTTTTAC
AAAGGATAATCGAGTTCACATTGGACCAAAAATGGAAATTCGGGTCGTTACGTTAGGATT
GGATGGTGCTGGAAAAACTACTATCTTGTTTAAGTTAAAACAGGATGAATTCATGCAGCC
CATTCCAACAATTGGTTTTAACGTGGAAACTGTAGAATATAAAAATCTAAAATTCACTAT
TTGGGATGTAGGTGGAAAACACAAATTAAGACCATTGTGGAAACATTATTACCTCAATAC
TCAAGCTGTTGTGTTTGTTGTAGATAGCAGTCATAGAGACAGAATTAGTGAAGCACACAG
CGAACTTGCAAAGTTGTTAACGGAAAAAGAACTCCGAGATGCTCTGCTCCTGATTTTTGC
TAACAAACAGGATGTTGCTGGAGCACTGTCAGTAGAAGAAATCACTGAACTACTCAGTCT
CCATAAATTATGCTGTGGCCGTAGCTGGTATATTCAGGGCTGTGATGCTCGAAGTGGTAT
GGGACTGTATGAAGGGTTGGACTGGCTCTCACGGCAACTTGTAGCTGCTGGAGTATTGGA
TGTTGCTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAG
GCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCA
CCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGA
TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGT
GAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAAC
AACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTA
AGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTT
GCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTC
TGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAAT
GTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATG
AGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAA
CATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC
CCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTAC
ATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTT
CCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCC
GGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCA
CCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC
ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAG
GAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAA
CCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATG
GCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAA
TTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCG
GCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATT
GCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGT
CAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAG
CATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGG
CGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAG
GCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCC
GCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAG
GACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGA
CCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTC
ATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGT
CCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCA
GAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACA
CTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAG
TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCA
AGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGG
GGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAA
AAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGC
CCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAA
TGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGAT
TGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCT
GAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCC
CTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATC
GAGATCT