SYBU ORF clone pFN21AA1472

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AA1472

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Clone info.

Species

human

Clone Name

pFN21AA1472 Sequence (with vector) Restriction Map

Product ID

FHC00235

Flexi Clone PID

FXC00235

Original Clone PID

ORK00235

ORF Sequence

DNA sequence (1989 bp)
Protein sequence (663 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384607]

Gene

KIAA1472

Symbol

SYBU

Alias : GOLSYN, OCSYN, SNPHL

Description

syntabulin (syntaxin-interacting), transcript variant 1

Original Clone ID

fk07908

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1989 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 663 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS47912.1 5.1e-161 100.0 SYBU CCDS43763.1 2.5e-160 99.8 SYBU CCDS43764.1 5.4e-159 99.8 SYBU CCDS55271.1 9.9e-130 100.0 SYBU CCDS83315.1 6.1e-124 100.0 SYBU The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition None - - - - -
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 606 SFLVDLLAVAAPVVPTVLWAFST 628 PRIMARY 23 2 633 TDPVYNIGALLRGCCVVALHSL 654 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001093224 663 611568 100.0 100.0 NP_001093218 663 611568 100.0 100.0 NP_001093214 663 611568 100.0 100.0 NP_001093220 663 611568 100.0 100.0 NP_001093222 663 611568 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AA1472 Download

>KIAA1472  1989 bp
ATGGGGCCCCTCCGCGAGAGCAAGAAGGAGCACAGAGTGCAGCATCATGACAAGGAGATT
TCTCGAAGCCGAATTCCCCGGTTGATTCTTCGGCCCCATATGCCCCAACAACAGCACAAA
GTGTCCCCAGCCTCTGAGTCTCCTTTCTCTGAGGAAGAGAGCAGAGAGTTCAACCCCAGC
AGCTCTGGGCGCTCAGCGAGGACCGTTAGCAGCAACAGCTTCTGCTCAGATGACACAGGC
TGTCCTAGCAGCCAGTCAGTGTCTCCTGTGAAGACACCCTCAGATGCTGGAAACAGCCCC
ATTGGCTTTTGCCCTGGAAGTGATGAAGGCTTCACCAGAAAGAAATGCACGATTGGAATG
GTTGGTGAAGGAAGCATTCAGTCCTCTCGATATAAGAAGGAATCAAAGTCAGGCCTTGTG
AAACCAGGTAGTGAAGCTGATTTTAGCTCCTCGAGCAGCACAGGCAGCATTTCCGCTCCT
GAGGTCCATATGTCGACTGCGGGAAGCAAGCGGTCTTCTTCTTCACGCAATCGAGGTCCT
CATGGGCGGAGTAATGGAGCTTCGTCACACAAGCCTGGCAGCAGCCCATCATCCCCGCGG
GAAAAGGACCTTCTGTCCATGCTGTGCAGGAATCAGCTGAGCCCTGTCAATATCCATCCC
AGTTATGCACCTTCTTCCCCAAGCAGTAGCAACTCAGGCTCCTACAAAGGAAGCGACTGT
AGCCCCATCATGAGGCGTTCTGGAAGGTACATGTCTTGCGGTGAAAATCATGGTGTCAGA
CCCCCAAACCCAGAGCAGTATTTGACTCCACTGCAGCAGAAAGAGGTGACAGTGAGACAC
CTCAAAACCAAGCTGAAGGAATCTGAGCGCCGACTCCATGAAAGGGAAAGTGAAATCGTG
GAGCTTAAGTCCCAGCTGGCCCGCATGCGAGAGGACTGGATTGAGGAGGAGTGTCACCGG
GTAGAGGCCCAGTTGGCACTCAAAGAAGCCAGGAAAGAGATTAAACAGCTCAAACAGGTC
ATCGAAACCATGCGGAGCAGCTTGGCTGATAAAGATAAAGGCATTCAGAAATATTTTGTG
GACATAAACATCCAAAACAAGAAGCTGGAGTCTCTCCTTCAGAGCATGGAGATGGCACAC
AGTGGCTCTCTGAGGGACGAACTGTGCCTAGACTTTCCATGTGATTCCCCAGAGAAGAGC
TTAACCCTCAACCCCCCTCTTGACACAATGGCAGATGGGTTATCTCTGGAAGAGCAGGTC
ACGGGGGAAGGGGCTGACAGGGAGCTACTGGTAGGAGATAGCATAGCCAACAGCACAGAT
TTGTTCGATGAGATAGTGACAGCCACCACCACAGAATCTGGTGACCTGGAGCTTGTGCAT
TCCACCCCTGGGGCTAACGTCCTGGAGCTGCTGCCCATAGTCATGGGTCAGGAGGAGGGC
AGTGTGGTGGTGGAGCGAGCCGTTCAGACCGACGTGGTGCCCTACAGCCCAGCCATCTCA
GAGCTCATTCAGAGTGTGCTGCAGAAGCTCCAGGACCCCTGTCCCTCGAGCTTGGCGTCC
CCTGATGAGTCTGAACCAGACTCGATGGAGAGCTTCCCAGAGTCCCTCTCTGCCTTAGTG
GTTGATTTAACTCCAAGAAATCCAAACTCAGCCATCCTTTTGTCTCCCGTGGAGACCCCC
TACGCCAATGTGGATGCAGAAGTTCATGCAAACCGCCTCATGAGAGAGCTGGATTTTGCA
GCCTGCGTGGAAGAGAGGTTGGATGGTGTCATCCCACTGGCTCGCGGGGGCGTCGTGAGG
CAGTACTGGAGCAGCAGCTTCCTGGTGGATCTCCTGGCTGTGGCTGCCCCCGTGGTCCCC
ACGGTTCTGTGGGCATTCAGTACTCAGAGAGGGGGAACGGATCCTGTGTATAACATCGGG
GCCTTGCTCAGGGGCTGTTGCGTGGTTGCCCTGCATTCGCTCCGCCGCACCGCCTTCCGT
ATCAAAACC

ORF Protein

Cloned ORF protein sequence for pFN21AA1472 Download

>KIAA1472  663 aa
MGPLRESKKEHRVQHHDKEISRSRIPRLILRPHMPQQQHKVSPASESPFSEEESREFNPS
SSGRSARTVSSNSFCSDDTGCPSSQSVSPVKTPSDAGNSPIGFCPGSDEGFTRKKCTIGM
VGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSSRNRGP
HGRSNGASSHKPGSSPSSPREKDLLSMLCRNQLSPVNIHPSYAPSSPSSSNSGSYKGSDC
SPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTKLKESERRLHERESEIV
ELKSQLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFV
DINIQNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQV
TGEGADRELLVGDSIANSTDLFDEIVTATTTESGDLELVHSTPGANVLELLPIVMGQEEG
SVVVERAVQTDVVPYSPAISELIQSVLQKLQDPCPSSLASPDESEPDSMESFPESLSALV
VDLTPRNPNSAILLSPVETPYANVDAEVHANRLMRELDFAACVEERLDGVIPLARGGVVR
QYWSSSFLVDLLAVAAPVVPTVLWAFSTQRGGTDPVYNIGALLRGCCVVALHSLRRTAFR
IKT

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AA1472 Download

>pFN21AA1472  6694 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGGCCCCTCCGCGAGAGCAAGAAGGAGCACAG
AGTGCAGCATCATGACAAGGAGATTTCTCGAAGCCGAATTCCCCGGTTGATTCTTCGGCC
CCATATGCCCCAACAACAGCACAAAGTGTCCCCAGCCTCTGAGTCTCCTTTCTCTGAGGA
AGAGAGCAGAGAGTTCAACCCCAGCAGCTCTGGGCGCTCAGCGAGGACCGTTAGCAGCAA
CAGCTTCTGCTCAGATGACACAGGCTGTCCTAGCAGCCAGTCAGTGTCTCCTGTGAAGAC
ACCCTCAGATGCTGGAAACAGCCCCATTGGCTTTTGCCCTGGAAGTGATGAAGGCTTCAC
CAGAAAGAAATGCACGATTGGAATGGTTGGTGAAGGAAGCATTCAGTCCTCTCGATATAA
GAAGGAATCAAAGTCAGGCCTTGTGAAACCAGGTAGTGAAGCTGATTTTAGCTCCTCGAG
CAGCACAGGCAGCATTTCCGCTCCTGAGGTCCATATGTCGACTGCGGGAAGCAAGCGGTC
TTCTTCTTCACGCAATCGAGGTCCTCATGGGCGGAGTAATGGAGCTTCGTCACACAAGCC
TGGCAGCAGCCCATCATCCCCGCGGGAAAAGGACCTTCTGTCCATGCTGTGCAGGAATCA
GCTGAGCCCTGTCAATATCCATCCCAGTTATGCACCTTCTTCCCCAAGCAGTAGCAACTC
AGGCTCCTACAAAGGAAGCGACTGTAGCCCCATCATGAGGCGTTCTGGAAGGTACATGTC
TTGCGGTGAAAATCATGGTGTCAGACCCCCAAACCCAGAGCAGTATTTGACTCCACTGCA
GCAGAAAGAGGTGACAGTGAGACACCTCAAAACCAAGCTGAAGGAATCTGAGCGCCGACT
CCATGAAAGGGAAAGTGAAATCGTGGAGCTTAAGTCCCAGCTGGCCCGCATGCGAGAGGA
CTGGATTGAGGAGGAGTGTCACCGGGTAGAGGCCCAGTTGGCACTCAAAGAAGCCAGGAA
AGAGATTAAACAGCTCAAACAGGTCATCGAAACCATGCGGAGCAGCTTGGCTGATAAAGA
TAAAGGCATTCAGAAATATTTTGTGGACATAAACATCCAAAACAAGAAGCTGGAGTCTCT
CCTTCAGAGCATGGAGATGGCACACAGTGGCTCTCTGAGGGACGAACTGTGCCTAGACTT
TCCATGTGATTCCCCAGAGAAGAGCTTAACCCTCAACCCCCCTCTTGACACAATGGCAGA
TGGGTTATCTCTGGAAGAGCAGGTCACGGGGGAAGGGGCTGACAGGGAGCTACTGGTAGG
AGATAGCATAGCCAACAGCACAGATTTGTTCGATGAGATAGTGACAGCCACCACCACAGA
ATCTGGTGACCTGGAGCTTGTGCATTCCACCCCTGGGGCTAACGTCCTGGAGCTGCTGCC
CATAGTCATGGGTCAGGAGGAGGGCAGTGTGGTGGTGGAGCGAGCCGTTCAGACCGACGT
GGTGCCCTACAGCCCAGCCATCTCAGAGCTCATTCAGAGTGTGCTGCAGAAGCTCCAGGA
CCCCTGTCCCTCGAGCTTGGCGTCCCCTGATGAGTCTGAACCAGACTCGATGGAGAGCTT
CCCAGAGTCCCTCTCTGCCTTAGTGGTTGATTTAACTCCAAGAAATCCAAACTCAGCCAT
CCTTTTGTCTCCCGTGGAGACCCCCTACGCCAATGTGGATGCAGAAGTTCATGCAAACCG
CCTCATGAGAGAGCTGGATTTTGCAGCCTGCGTGGAAGAGAGGTTGGATGGTGTCATCCC
ACTGGCTCGCGGGGGCGTCGTGAGGCAGTACTGGAGCAGCAGCTTCCTGGTGGATCTCCT
GGCTGTGGCTGCCCCCGTGGTCCCCACGGTTCTGTGGGCATTCAGTACTCAGAGAGGGGG
AACGGATCCTGTGTATAACATCGGGGCCTTGCTCAGGGGCTGTTGCGTGGTTGCCCTGCA
TTCGCTCCGCCGCACCGCCTTCCGTATCAAAACCGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT