PTCD1 ORF clone pF1KSDA0632

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Flexi ORF Clone pF1KSDA0632

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Clone info.

Species

human

Clone Name

pF1KSDA0632 Sequence (with vector) Restriction Map

Product ID

FXC00581

HaloTag Clone PID

FHC00581

ORF Sequence

DNA sequence (2100 bp)
Protein sequence (700 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1KM Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383927]

Gene

KIAA0632

Symbol

PTCD1

Description

pentatricopeptide repeat domain 1

Original Clone ID

hh01900

Features of the cloned ORF sequence

Description

Length: 2100 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 700 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34691.1 0 100.0 PTCD1 CCDS56496.1 0 100.0 PTCD1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002885 176 203 PF01535 Pentatricopeptide repeat IPR002885 249 277 PF01535 Pentatricopeptide repeat HMMTigr IPR002885 176 207 TIGR00756 Pentatricopeptide repeat ProfileScan IPR002885 135 171 PS51375 Pentatricopeptide repeat IPR002885 172 206 PS51375 Pentatricopeptide repeat IPR002885 207 245 PS51375 Pentatricopeptide repeat IPR002885 246 280 PS51375 Pentatricopeptide repeat IPR002885 281 317 PS51375 Pentatricopeptide repeat IPR002885 519 553 PS51375 Pentatricopeptide repeat IPR002885 586 620 PS51375 Pentatricopeptide repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056360 700 614774 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0632 Download

>KIAA0632  2100 bp
ATGGACTTCGTGAGACTCGCTCGACTGTTCGCCAGGGCCCGCCCCATGGGACTGTTCATC
CTGCAACACCTGGACCCCTGTAGAGCCAGGTGGGCAGGAGGCAGGGAGGGGCTGATGCGG
CCAATGTGGGCGCCCTTCAGCAGCTCCTCCTCTCAGCTGCCCCTCGGCCAGGAGCGTCAG
GAAAACACGGGCAGCCTGGGCTCTGACCCGAGCCACTCCAACTCCACGGCCACGCAGGAA
GAAGACGAGGAGGAGGAGGAGAGTTTTGGGACCCTCTCTGACAAATACTCCTCCCGGAGA
CTATTCCGCAAATCCGCAGCCCAGTTCCATAACCTGCGGTTTGGGGAACGGAGAGATGAG
CAAATGGAACCGGAGCCCAAATTATGGCGAGGCCGGAGAAACACCCCGTACTGGTACTTC
TTGCAGTGCAAACACCTGATCAAGGAAGGGAAGCTGGTTGAAGCCCTGGACCTGTTTGAG
AGGCAGATGCTGAAGGAGGAGCGATTGCAGCCCATGGAGAGCAACTACACGGTGCTGATT
GGGGGCTGCGGGCGGGTTGGCTACCTGAAGAAGGCCTTCAACCTCTACAACCAGATGAAA
AAGCGGGACCTGGAGCCCTCGGACGCCACCTACACGGCCCTGTTCAACGTCTGTGCCGAG
TCCCCCTGGAAGGACTCAGCTCTACAGAGCGCCCTGAAGCTCCGGCAGCAGCTGCAGGCC
AAAAACTTCGAGCTCAACTTGAAAACATACCACGCGCTGCTGAAGATGGCTGCCAAGTGC
GCAGACCTTAGGATGTGCCTCGATGTGTTCAAGGAAATCATCCACAAAGGGCACGTGGTC
ACAGAGGAGACCTTCAGTTTCCTGCTCATGGGCTGCATCCAAGACAAGAAGACAGGCTTC
CGGTACGCCCTCCAGGTGTGGCGGCTGATGCTGAGTCTAGGGCTACAGCCGAGCCGGGAC
AGCTACAACCTGCTGTTGGTGGCAGCTCGGGACTGTGGCCTAGGGGACCCCCAGGTGGCC
TCAGAGCTGCTTCTGAAGCCCAGGGAGGAGGCGACTGTGCTTCAGCCCCCAGTGAGCAGG
CAGCGGCCAAGGAGGACAGCCCAGGCCAAGGCAGGCAACCTCATGTCAGCCATGCTGCAT
GTGGAGGCCCTGGAGAGGCAGCTGTTTCTGGAACCTTCTCAGGCACTTGGGCCTCCAGAG
CCTCCGGAAGCCAGAGTGCCCGGCAAGGCCCAACCAGAGGTGGATACTAAGGCAGAGCCC
AGCCACACAGCAGCCCTCACCGCAGTGGCCCTGAAGCCACCTCCCGTGGAGCTGGAAGTC
AACCTCCTGACCCCCGGGGCCGTTCCCCCTACAGTGGTCTCCTTTGGAACGGTGACCACC
CCAGCTGACCGGCTGGCCTTGATAGGGGGCCTGGAGGGCTTCCTGAGCAAGATGGCAGAG
CACAGGCAGCAGCCCGACATCAGGACCCTCACGCTACTGGCCGAGGTGGTGGAGTCCGGG
AGTCCTGCAGAGTCCTTGCTGCTGGCCCTCCTGGATGAGCACCAGGTAGAGGCCGACCTG
ACATTCTTTAACACGCTGGTGAGAAAGAAGAGCAAGCTGGGAGACCTGGAGGGGGCCAAG
GCGCTGTTGCCGGTCCTGGCAAAGAGGGGCCTCGTCCCCAACCTGCAGACATTCTGCAAC
CTGGCCATCGGGTGCCACAGGCCGAAGGACGGTCTACAGCTTCTCACAGACATGAAGAAG
TCCCAGGTGACCCCCAACACTCACATCTACAGTGCCCTCATCAACGCGGCCATCAGGAAG
CTGAACTACACCTATCTCATCAGCATCTTGAAGGACATGAAGCAGAACAGGGTCCCGGTG
AACGAAGTGGTCATCCGCCAGCTGGAGTTTGCAGCCCAGTACCCTCCCACCTTTGACCGG
TACCAAGGGAAGAACACCTACCTGGAGAAGATTGACGGCTTCCGAGCCTATTACAAGCAG
TGGCTGACAGTGATGCCCGCAGAGGAAACCCCGCACCCCTGGCAGAAGTTCCGGACCAAG
CCCCAGGGGGACCAGGACACCGGCAAGGAGGCTGATGACGGATGTGCCCTTGGGGGCAGG

ORF Protein

Cloned ORF protein sequence for pF1KSDA0632 Download

>KIAA0632  700 aa
MDFVRLARLFARARPMGLFILQHLDPCRARWAGGREGLMRPMWAPFSSSSSQLPLGQERQ
ENTGSLGSDPSHSNSTATQEEDEEEEESFGTLSDKYSSRRLFRKSAAQFHNLRFGERRDE
QMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLVEALDLFERQMLKEERLQPMESNYTVLI
GGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQA
KNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQDKKTGF
RYALQVWRLMLSLGLQPSRDSYNLLLVAARDCGLGDPQVASELLLKPREEATVLQPPVSR
QRPRRTAQAKAGNLMSAMLHVEALERQLFLEPSQALGPPEPPEARVPGKAQPEVDTKAEP
SHTAALTAVALKPPPVELEVNLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAE
HRQQPDIRTLTLLAEVVESGSPAESLLLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAK
ALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRK
LNYTYLISILKDMKQNRVPVNEVVIRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQ
WLTVMPAEETPHPWQKFRTKPQGDQDTGKEADDGCALGGR

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0632 Download

>pF1KSDA0632  5239 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGACTTCGTGAGACTCGCTCGACTGTTCGCCAGGGCCCGCCCCATGGGACTG
TTCATCCTGCAACACCTGGACCCCTGTAGAGCCAGGTGGGCAGGAGGCAGGGAGGGGCTG
ATGCGGCCAATGTGGGCGCCCTTCAGCAGCTCCTCCTCTCAGCTGCCCCTCGGCCAGGAG
CGTCAGGAAAACACGGGCAGCCTGGGCTCTGACCCGAGCCACTCCAACTCCACGGCCACG
CAGGAAGAAGACGAGGAGGAGGAGGAGAGTTTTGGGACCCTCTCTGACAAATACTCCTCC
CGGAGACTATTCCGCAAATCCGCAGCCCAGTTCCATAACCTGCGGTTTGGGGAACGGAGA
GATGAGCAAATGGAACCGGAGCCCAAATTATGGCGAGGCCGGAGAAACACCCCGTACTGG
TACTTCTTGCAGTGCAAACACCTGATCAAGGAAGGGAAGCTGGTTGAAGCCCTGGACCTG
TTTGAGAGGCAGATGCTGAAGGAGGAGCGATTGCAGCCCATGGAGAGCAACTACACGGTG
CTGATTGGGGGCTGCGGGCGGGTTGGCTACCTGAAGAAGGCCTTCAACCTCTACAACCAG
ATGAAAAAGCGGGACCTGGAGCCCTCGGACGCCACCTACACGGCCCTGTTCAACGTCTGT
GCCGAGTCCCCCTGGAAGGACTCAGCTCTACAGAGCGCCCTGAAGCTCCGGCAGCAGCTG
CAGGCCAAAAACTTCGAGCTCAACTTGAAAACATACCACGCGCTGCTGAAGATGGCTGCC
AAGTGCGCAGACCTTAGGATGTGCCTCGATGTGTTCAAGGAAATCATCCACAAAGGGCAC
GTGGTCACAGAGGAGACCTTCAGTTTCCTGCTCATGGGCTGCATCCAAGACAAGAAGACA
GGCTTCCGGTACGCCCTCCAGGTGTGGCGGCTGATGCTGAGTCTAGGGCTACAGCCGAGC
CGGGACAGCTACAACCTGCTGTTGGTGGCAGCTCGGGACTGTGGCCTAGGGGACCCCCAG
GTGGCCTCAGAGCTGCTTCTGAAGCCCAGGGAGGAGGCGACTGTGCTTCAGCCCCCAGTG
AGCAGGCAGCGGCCAAGGAGGACAGCCCAGGCCAAGGCAGGCAACCTCATGTCAGCCATG
CTGCATGTGGAGGCCCTGGAGAGGCAGCTGTTTCTGGAACCTTCTCAGGCACTTGGGCCT
CCAGAGCCTCCGGAAGCCAGAGTGCCCGGCAAGGCCCAACCAGAGGTGGATACTAAGGCA
GAGCCCAGCCACACAGCAGCCCTCACCGCAGTGGCCCTGAAGCCACCTCCCGTGGAGCTG
GAAGTCAACCTCCTGACCCCCGGGGCCGTTCCCCCTACAGTGGTCTCCTTTGGAACGGTG
ACCACCCCAGCTGACCGGCTGGCCTTGATAGGGGGCCTGGAGGGCTTCCTGAGCAAGATG
GCAGAGCACAGGCAGCAGCCCGACATCAGGACCCTCACGCTACTGGCCGAGGTGGTGGAG
TCCGGGAGTCCTGCAGAGTCCTTGCTGCTGGCCCTCCTGGATGAGCACCAGGTAGAGGCC
GACCTGACATTCTTTAACACGCTGGTGAGAAAGAAGAGCAAGCTGGGAGACCTGGAGGGG
GCCAAGGCGCTGTTGCCGGTCCTGGCAAAGAGGGGCCTCGTCCCCAACCTGCAGACATTC
TGCAACCTGGCCATCGGGTGCCACAGGCCGAAGGACGGTCTACAGCTTCTCACAGACATG
AAGAAGTCCCAGGTGACCCCCAACACTCACATCTACAGTGCCCTCATCAACGCGGCCATC
AGGAAGCTGAACTACACCTATCTCATCAGCATCTTGAAGGACATGAAGCAGAACAGGGTC
CCGGTGAACGAAGTGGTCATCCGCCAGCTGGAGTTTGCAGCCCAGTACCCTCCCACCTTT
GACCGGTACCAAGGGAAGAACACCTACCTGGAGAAGATTGACGGCTTCCGAGCCTATTAC
AAGCAGTGGCTGACAGTGATGCCCGCAGAGGAAACCCCGCACCCCTGGCAGAAGTTCCGG
ACCAAGCCCCAGGGGGACCAGGACACCGGCAAGGAGGCTGATGACGGATGTGCCCTTGGG
GGCAGGTACGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
CGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGG
TTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAG
GCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGAC
GAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGA
TACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTT
ACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGC
TGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCC
CCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTA
AGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTAT
GTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACA
GTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCT
TGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATT
ACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCT
CAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTC
ACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGG
ATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTA
CCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTT
TTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTT
AGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCAT
CGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTC
AGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGC
GGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGC
GCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAA
ACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC
TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGG
AGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCAT
CCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATT
CAAATATGTATCCGCTCAT