PTCD1 ORF clone FHC00581

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Halotag ORF Clone FHC00581

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Clone info.

Species

human

Clone Name

pFN21ASDA0632 Sequence (with vector) Restriction Map

Product ID

FHC00581

Flexi Clone PID

FXC00581

ORF Sequence

DNA sequence (2100 bp)
Protein sequence (700 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383927]

Gene

KIAA0632

Symbol

PTCD1

Description

pentatricopeptide repeat domain 1

Original Clone ID

hh01900

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 2100 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 700 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34691.1 0 100.0 PTCD1 CCDS56496.1 0 100.0 PTCD1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002885 176 203 PF01535 Pentatricopeptide repeat IPR002885 249 277 PF01535 Pentatricopeptide repeat HMMTigr IPR002885 176 207 TIGR00756 Pentatricopeptide repeat ProfileScan IPR002885 135 171 PS51375 Pentatricopeptide repeat IPR002885 172 206 PS51375 Pentatricopeptide repeat IPR002885 207 245 PS51375 Pentatricopeptide repeat IPR002885 246 280 PS51375 Pentatricopeptide repeat IPR002885 281 317 PS51375 Pentatricopeptide repeat IPR002885 519 553 PS51375 Pentatricopeptide repeat IPR002885 586 620 PS51375 Pentatricopeptide repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056360 700 614774 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA0632 Download

>KIAA0632  2100 bp
ATGGACTTCGTGAGACTCGCTCGACTGTTCGCCAGGGCCCGCCCCATGGGACTGTTCATC
CTGCAACACCTGGACCCCTGTAGAGCCAGGTGGGCAGGAGGCAGGGAGGGGCTGATGCGG
CCAATGTGGGCGCCCTTCAGCAGCTCCTCCTCTCAGCTGCCCCTCGGCCAGGAGCGTCAG
GAAAACACGGGCAGCCTGGGCTCTGACCCGAGCCACTCCAACTCCACGGCCACGCAGGAA
GAAGACGAGGAGGAGGAGGAGAGTTTTGGGACCCTCTCTGACAAATACTCCTCCCGGAGA
CTATTCCGCAAATCCGCAGCCCAGTTCCATAACCTGCGGTTTGGGGAACGGAGAGATGAG
CAAATGGAACCGGAGCCCAAATTATGGCGAGGCCGGAGAAACACCCCGTACTGGTACTTC
TTGCAGTGCAAACACCTGATCAAGGAAGGGAAGCTGGTTGAAGCCCTGGACCTGTTTGAG
AGGCAGATGCTGAAGGAGGAGCGATTGCAGCCCATGGAGAGCAACTACACGGTGCTGATT
GGGGGCTGCGGGCGGGTTGGCTACCTGAAGAAGGCCTTCAACCTCTACAACCAGATGAAA
AAGCGGGACCTGGAGCCCTCGGACGCCACCTACACGGCCCTGTTCAACGTCTGTGCCGAG
TCCCCCTGGAAGGACTCAGCTCTACAGAGCGCCCTGAAGCTCCGGCAGCAGCTGCAGGCC
AAAAACTTCGAGCTCAACTTGAAAACATACCACGCGCTGCTGAAGATGGCTGCCAAGTGC
GCAGACCTTAGGATGTGCCTCGATGTGTTCAAGGAAATCATCCACAAAGGGCACGTGGTC
ACAGAGGAGACCTTCAGTTTCCTGCTCATGGGCTGCATCCAAGACAAGAAGACAGGCTTC
CGGTACGCCCTCCAGGTGTGGCGGCTGATGCTGAGTCTAGGGCTACAGCCGAGCCGGGAC
AGCTACAACCTGCTGTTGGTGGCAGCTCGGGACTGTGGCCTAGGGGACCCCCAGGTGGCC
TCAGAGCTGCTTCTGAAGCCCAGGGAGGAGGCGACTGTGCTTCAGCCCCCAGTGAGCAGG
CAGCGGCCAAGGAGGACAGCCCAGGCCAAGGCAGGCAACCTCATGTCAGCCATGCTGCAT
GTGGAGGCCCTGGAGAGGCAGCTGTTTCTGGAACCTTCTCAGGCACTTGGGCCTCCAGAG
CCTCCGGAAGCCAGAGTGCCCGGCAAGGCCCAACCAGAGGTGGATACTAAGGCAGAGCCC
AGCCACACAGCAGCCCTCACCGCAGTGGCCCTGAAGCCACCTCCCGTGGAGCTGGAAGTC
AACCTCCTGACCCCCGGGGCCGTTCCCCCTACAGTGGTCTCCTTTGGAACGGTGACCACC
CCAGCTGACCGGCTGGCCTTGATAGGGGGCCTGGAGGGCTTCCTGAGCAAGATGGCAGAG
CACAGGCAGCAGCCCGACATCAGGACCCTCACGCTACTGGCCGAGGTGGTGGAGTCCGGG
AGTCCTGCAGAGTCCTTGCTGCTGGCCCTCCTGGATGAGCACCAGGTAGAGGCCGACCTG
ACATTCTTTAACACGCTGGTGAGAAAGAAGAGCAAGCTGGGAGACCTGGAGGGGGCCAAG
GCGCTGTTGCCGGTCCTGGCAAAGAGGGGCCTCGTCCCCAACCTGCAGACATTCTGCAAC
CTGGCCATCGGGTGCCACAGGCCGAAGGACGGTCTACAGCTTCTCACAGACATGAAGAAG
TCCCAGGTGACCCCCAACACTCACATCTACAGTGCCCTCATCAACGCGGCCATCAGGAAG
CTGAACTACACCTATCTCATCAGCATCTTGAAGGACATGAAGCAGAACAGGGTCCCGGTG
AACGAAGTGGTCATCCGCCAGCTGGAGTTTGCAGCCCAGTACCCTCCCACCTTTGACCGG
TACCAAGGGAAGAACACCTACCTGGAGAAGATTGACGGCTTCCGAGCCTATTACAAGCAG
TGGCTGACAGTGATGCCCGCAGAGGAAACCCCGCACCCCTGGCAGAAGTTCCGGACCAAG
CCCCAGGGGGACCAGGACACCGGCAAGGAGGCTGATGACGGATGTGCCCTTGGGGGCAGG

ORF Protein

Cloned ORF protein sequence for pFN21ASDA0632 Download

>KIAA0632  700 aa
MDFVRLARLFARARPMGLFILQHLDPCRARWAGGREGLMRPMWAPFSSSSSQLPLGQERQ
ENTGSLGSDPSHSNSTATQEEDEEEEESFGTLSDKYSSRRLFRKSAAQFHNLRFGERRDE
QMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLVEALDLFERQMLKEERLQPMESNYTVLI
GGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQA
KNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQDKKTGF
RYALQVWRLMLSLGLQPSRDSYNLLLVAARDCGLGDPQVASELLLKPREEATVLQPPVSR
QRPRRTAQAKAGNLMSAMLHVEALERQLFLEPSQALGPPEPPEARVPGKAQPEVDTKAEP
SHTAALTAVALKPPPVELEVNLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAE
HRQQPDIRTLTLLAEVVESGSPAESLLLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAK
ALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRK
LNYTYLISILKDMKQNRVPVNEVVIRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQ
WLTVMPAEETPHPWQKFRTKPQGDQDTGKEADDGCALGGR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA0632 Download

>pFN21ASDA0632  6829 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGGACTTCGTGAGACT
CGCTCGACTGTTCGCCAGGGCCCGCCCCATGGGACTGTTCATCCTGCAACACCTGGACCC
CTGTAGAGCCAGGTGGGCAGGAGGCAGGGAGGGGCTGATGCGGCCAATGTGGGCGCCCTT
CAGCAGCTCCTCCTCTCAGCTGCCCCTCGGCCAGGAGCGTCAGGAAAACACGGGCAGCCT
GGGCTCTGACCCGAGCCACTCCAACTCCACGGCCACGCAGGAAGAAGACGAGGAGGAGGA
GGAGAGTTTTGGGACCCTCTCTGACAAATACTCCTCCCGGAGACTATTCCGCAAATCCGC
AGCCCAGTTCCATAACCTGCGGTTTGGGGAACGGAGAGATGAGCAAATGGAACCGGAGCC
CAAATTATGGCGAGGCCGGAGAAACACCCCGTACTGGTACTTCTTGCAGTGCAAACACCT
GATCAAGGAAGGGAAGCTGGTTGAAGCCCTGGACCTGTTTGAGAGGCAGATGCTGAAGGA
GGAGCGATTGCAGCCCATGGAGAGCAACTACACGGTGCTGATTGGGGGCTGCGGGCGGGT
TGGCTACCTGAAGAAGGCCTTCAACCTCTACAACCAGATGAAAAAGCGGGACCTGGAGCC
CTCGGACGCCACCTACACGGCCCTGTTCAACGTCTGTGCCGAGTCCCCCTGGAAGGACTC
AGCTCTACAGAGCGCCCTGAAGCTCCGGCAGCAGCTGCAGGCCAAAAACTTCGAGCTCAA
CTTGAAAACATACCACGCGCTGCTGAAGATGGCTGCCAAGTGCGCAGACCTTAGGATGTG
CCTCGATGTGTTCAAGGAAATCATCCACAAAGGGCACGTGGTCACAGAGGAGACCTTCAG
TTTCCTGCTCATGGGCTGCATCCAAGACAAGAAGACAGGCTTCCGGTACGCCCTCCAGGT
GTGGCGGCTGATGCTGAGTCTAGGGCTACAGCCGAGCCGGGACAGCTACAACCTGCTGTT
GGTGGCAGCTCGGGACTGTGGCCTAGGGGACCCCCAGGTGGCCTCAGAGCTGCTTCTGAA
GCCCAGGGAGGAGGCGACTGTGCTTCAGCCCCCAGTGAGCAGGCAGCGGCCAAGGAGGAC
AGCCCAGGCCAAGGCAGGCAACCTCATGTCAGCCATGCTGCATGTGGAGGCCCTGGAGAG
GCAGCTGTTTCTGGAACCTTCTCAGGCACTTGGGCCTCCAGAGCCTCCGGAAGCCAGAGT
GCCCGGCAAGGCCCAACCAGAGGTGGATACTAAGGCAGAGCCCAGCCACACAGCAGCCCT
CACCGCAGTGGCCCTGAAGCCACCTCCCGTGGAGCTGGAAGTCAACCTCCTGACCCCCGG
GGCCGTTCCCCCTACAGTGGTCTCCTTTGGAACGGTGACCACCCCAGCTGACCGGCTGGC
CTTGATAGGGGGCCTGGAGGGCTTCCTGAGCAAGATGGCAGAGCACAGGCAGCAGCCCGA
CATCAGGACCCTCACGCTACTGGCCGAGGTGGTGGAGTCCGGGAGTCCTGCAGAGTCCTT
GCTGCTGGCCCTCCTGGATGAGCACCAGGTAGAGGCCGACCTGACATTCTTTAACACGCT
GGTGAGAAAGAAGAGCAAGCTGGGAGACCTGGAGGGGGCCAAGGCGCTGTTGCCGGTCCT
GGCAAAGAGGGGCCTCGTCCCCAACCTGCAGACATTCTGCAACCTGGCCATCGGGTGCCA
CAGGCCGAAGGACGGTCTACAGCTTCTCACAGACATGAAGAAGTCCCAGGTGACCCCCAA
CACTCACATCTACAGTGCCCTCATCAACGCGGCCATCAGGAAGCTGAACTACACCTATCT
CATCAGCATCTTGAAGGACATGAAGCAGAACAGGGTCCCGGTGAACGAAGTGGTCATCCG
CCAGCTGGAGTTTGCAGCCCAGTACCCTCCCACCTTTGACCGGTACCAAGGGAAGAACAC
CTACCTGGAGAAGATTGACGGCTTCCGAGCCTATTACAAGCAGTGGCTGACAGTGATGCC
CGCAGAGGAAACCCCGCACCCCTGGCAGAAGTTCCGGACCAAGCCCCAGGGGGACCAGGA
CACCGGCAAGGAGGCTGATGACGGATGTGCCCTTGGGGGCAGGTACGTAGTTTAAACGAA
TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG
CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG
CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA
CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT
GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT
TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC
AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG
ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC
GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT
ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA
GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC
AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT
CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT
CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG
CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC
ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA
CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT
GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT
GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG
ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA
CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA
ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC
ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG
CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT
ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT
ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC
AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG
ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG
GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG
GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA
GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA
ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA
TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA
AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG
GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT
GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG
CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA
AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT