ZNF500 ORF clone pF1KSDA0557

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Flexi ORF Clone pF1KSDA0557

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Clone info.

Species

human

Clone Name

pF1KSDA0557 Sequence (with vector) Restriction Map

Product ID

FXC00562

HaloTag Clone PID

FHC00562

ORF Sequence

DNA sequence (1440 bp)
Protein sequence (480 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383907]

Gene

KIAA0557

Symbol

ZNF500

Alias : ZKSCAN18, ZSCAN50

Description

zinc finger protein 500, transcript variant 1

Original Clone ID

hh01334

Features of the cloned ORF sequence

Description

Length: 1440 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 480 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32383.1 4e-120 100.0 ZNF500 CCDS76814.1 2.2e-107 100.0 ZNF500 CCDS10495.1 2.6e-33 43.8 ZNF213 CCDS4647.1 1.1e-31 41.7 ZKSCAN4 CCDS4650.1 2.2e-31 42.0 ZKSCAN3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 45 137 PF02023 Transcription regulator SCAN IPR001909 224 247 PF01352 Krueppel-associated box IPR007087 325 347 PF00096 Zinc finger IPR007087 353 375 PF00096 Zinc finger IPR007087 381 403 PF00096 Zinc finger IPR007087 437 459 PF00096 Zinc finger HMMSmart IPR003309 46 152 SM00431 Transcription regulator SCAN IPR015880 325 347 SM00355 Zinc finger IPR015880 353 375 SM00355 Zinc finger IPR015880 381 403 SM00355 Zinc finger IPR015880 409 431 SM00355 Zinc finger IPR015880 437 459 SM00355 Zinc finger ProfileScan IPR003309 50 131 PS50804 Transcription regulator SCAN IPR007087 325 352 PS50157 Zinc finger IPR007087 353 380 PS50157 Zinc finger IPR007087 381 408 PS50157 Zinc finger IPR007087 409 436 PS50157 Zinc finger IPR007087 437 464 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001128127 459 608387 43.8 94.0 NP_004211 459 608387 43.8 94.0 XP_005249152 545 611643 41.7 92.1 NP_061983 545 611643 41.7 92.1 NP_077819 538 612791 42.0 92.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0557 Download

>KIAA0557  1440 bp
ATGGCCACTGTCCCTGGCCTCCAGCCCCTGCCAACCTTGGAGCAGGACCTGGAACAGGAA
GAGATCCTGATTGTGAAGGTGGAGGAGGACTTCTGCTTGGAAGAGGAGCCCTCCGTGGAG
ACGGAGGACCCCAGCCCTGAGACTTTCCGCCAGCTCTTCCGGCTCTTCTGCTACCAGGAG
GTGGCTGGGCCCCGGGAGGCCCTGAGCCGCCTCTGGGAGCTGTGCTGCCGCTGGCTGCGG
CCGGAGCTGCGCACCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCCTGACT
GTGCTGCCGGGGGAGATCCAGGCTCGGGTACGCGAGCAGCAGCCGGAGAGCGGTGAGGAG
GCCGTGGTCCTCGTGGAAGGGCTGCAGCGGAAGCCCAGGAAACACAGGCAGCGGGGCTCA
GAGCTGCTTTCTGATGACGAGGTGCCCCTCGGGATAGGGGGACAGTTCTTAAAACACCAG
GCAGAGGCTCAGCCAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAG
CCCCCAGCCCAGCTGAGCCACAGGCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGC
CCTCCAGCTCCCCGGCATCAGGAGATGGCGTCAGCCTCGCCCTTCCTTTCGGCCTGGTCC
CAGGTGCCCGTGAACTTGGAGGACGTGGCTGTATACCTTTCTGGGGAGGAGCCAAGATGC
ATGGACCCAGCTCAGCGGGACGCGCCGCTGGAGAATGAAGGACCTGGGATCCAGTTGGAG
GACGGCGGTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCG
GCACGATGCCAGGGGCCTGGCCACCCGCTCCCAGGTCAGAGGCCAGCCCCAGTCAGGGGC
TTGGTCAGGCCTGATCAGCCAAGAGGCGGCCCCCCACCAGGAAGACGGGCTTCCCATGGG
GCTGACAAGCCGTACACCTGCCCCGAATGTGGCAAAGGCTTCAGCAAGACGTCCCACTTG
ACCAAGCACCAGCGCACACACACGGGCGAGCGGCCTTACAAGTGCCTAGTCTGTGGGAAG
GGCTTTAGCGACCGCTCCAACTTCAGCACGCACCAGAGGGTGCACACAGGCGAGAAGCCC
TACCCGTGCCCCGAGTGTGGGAAGCGCTTCAGCCAGAGCTCCAGCCTGGTCATCCACCGC
AGGACACACAGCGGGGAGCGGCCCTATGCCTGCACCCAGTGCGGGAAGCGCTTCAACAAC
AGCTCGCACTTCAGCGCCCACCGCCGGACGCACACAGGTGAGAAGCCCTACACCTGCCCG
GCCTGTGGCCGGGGCTTCCGCCGGGGCACCGACCTGCACAAGCACCAGCGGACCCACATG
GGGGCAGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGGAGGCCCCGGTGCAAAAGCC

ORF Protein

Cloned ORF protein sequence for pF1KSDA0557 Download

>KIAA0557  480 aa
MATVPGLQPLPTLEQDLEQEEILIVKVEEDFCLEEEPSVETEDPSPETFRQLFRLFCYQE
VAGPREALSRLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQARVREQQPESGEE
AVVLVEGLQRKPRKHRQRGSELLSDDEVPLGIGGQFLKHQAEAQPEDLSLEEEARFSSQQ
PPAQLSHRPQRGPLLWPERGPPAPRHQEMASASPFLSAWSQVPVNLEDVAVYLSGEEPRC
MDPAQRDAPLENEGPGIQLEDGGDGREDAPLRMEWYRVLSARCQGPGHPLPGQRPAPVRG
LVRPDQPRGGPPPGRRASHGADKPYTCPECGKGFSKTSHLTKHQRTHTGERPYKCLVCGK
GFSDRSNFSTHQRVHTGEKPYPCPECGKRFSQSSSLVIHRRTHSGERPYACTQCGKRFNN
SSHFSAHRRTHTGEKPYTCPACGRGFRRGTDLHKHQRTHMGAGSLPTLQPVAPGGPGAKA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0557 Download

>pF1KSDA0557  4577 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGCCACTGTCCCTGGCCTCCAGCCCCTGCCAACCTTGGAGCAGGACCTGGAA
CAGGAAGAGATCCTGATTGTGAAGGTGGAGGAGGACTTCTGCTTGGAAGAGGAGCCCTCC
GTGGAGACGGAGGACCCCAGCCCTGAGACTTTCCGCCAGCTCTTCCGGCTCTTCTGCTAC
CAGGAGGTGGCTGGGCCCCGGGAGGCCCTGAGCCGCCTCTGGGAGCTGTGCTGCCGCTGG
CTGCGGCCGGAGCTGCGCACCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTC
CTGACTGTGCTGCCGGGGGAGATCCAGGCTCGGGTACGCGAGCAGCAGCCGGAGAGCGGT
GAGGAGGCCGTGGTCCTCGTGGAAGGGCTGCAGCGGAAGCCCAGGAAACACAGGCAGCGG
GGCTCAGAGCTGCTTTCTGATGACGAGGTGCCCCTCGGGATAGGGGGACAGTTCTTAAAA
CACCAGGCAGAGGCTCAGCCAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGC
CAGCAGCCCCCAGCCCAGCTGAGCCACAGGCCACAGAGGGGCCCGCTGTTGTGGCCAGAG
AGAGGCCCTCCAGCTCCCCGGCATCAGGAGATGGCGTCAGCCTCGCCCTTCCTTTCGGCC
TGGTCCCAGGTGCCCGTGAACTTGGAGGACGTGGCTGTATACCTTTCTGGGGAGGAGCCA
AGATGCATGGACCCAGCTCAGCGGGACGCGCCGCTGGAGAATGAAGGACCTGGGATCCAG
TTGGAGGACGGCGGTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTG
CTCTCGGCACGATGCCAGGGGCCTGGCCACCCGCTCCCAGGTCAGAGGCCAGCCCCAGTC
AGGGGCTTGGTCAGGCCTGATCAGCCAAGAGGCGGCCCCCCACCAGGAAGACGGGCTTCC
CATGGGGCTGACAAGCCGTACACCTGCCCCGAATGTGGCAAAGGCTTCAGCAAGACGTCC
CACTTGACCAAGCACCAGCGCACACACACGGGCGAGCGGCCTTACAAGTGCCTAGTCTGT
GGGAAGGGCTTTAGCGACCGCTCCAACTTCAGCACGCACCAGAGGGTGCACACAGGCGAG
AAGCCCTACCCGTGCCCCGAGTGTGGGAAGCGCTTCAGCCAGAGCTCCAGCCTGGTCATC
CACCGCAGGACACACAGCGGGGAGCGGCCCTATGCCTGCACCCAGTGCGGGAAGCGCTTC
AACAACAGCTCGCACTTCAGCGCCCACCGCCGGACGCACACAGGTGAGAAGCCCTACACC
TGCCCGGCCTGTGGCCGGGGCTTCCGCCGGGGCACCGACCTGCACAAGCACCAGCGGACC
CACATGGGGGCAGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGGAGGCCCCGGTGCA
AAAGCCTACGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT
ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC
CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA
GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA
CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG
TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC
CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG
ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT
AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT
ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC
GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA
GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC
CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT