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SpecieshumanProduct IDFXC03138Cloning SiteSgfI-PmeIGeneKIBB9000SymbolAVPR1A
Alias : AVPR V1a, AVPR1, V1aRDescriptionarginine vasopressin receptor 1AOriginal Clone IDcp01035
Length: 1254 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 418 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS8965.1 1.2e-118 100.0 AVPR1A CCDS73015.1 1.1e-48 51.4 AVPR1B CCDS2570.1 1.4e-48 49.7 OXTR CCDS55539.1 1.2e-28 43.1 AVPR2 CCDS14735.1 1.4e-28 42.2 AVPR2
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR001224 6 21 PR00752 Vasopressin V1A receptor IPR001224 29 46 PR00752 Vasopressin V1A receptor IPR001817 46 58 PR00896 Vasopressin receptor IPR000276 53 77 PR00237 GPCR IPR001224 76 91 PR00752 Vasopressin V1A receptor IPR001817 82 93 PR00896 Vasopressin receptor IPR000276 86 107 PR00237 GPCR IPR001817 107 121 PR00896 Vasopressin receptor IPR000276 131 153 PR00237 GPCR IPR001224 155 172 PR00752 Vasopressin V1A receptor IPR000276 166 187 PR00237 GPCR IPR001817 202 216 PR00896 Vasopressin receptor IPR000276 217 240 PR00237 GPCR IPR001817 235 247 PR00896 Vasopressin receptor IPR001224 265 278 PR00752 Vasopressin V1A receptor IPR001817 282 296 PR00896 Vasopressin receptor IPR000276 289 313 PR00237 GPCR IPR001817 310 317 PR00896 Vasopressin receptor IPR000276 330 356 PR00237 GPCR IPR001817 335 343 PR00896 Vasopressin receptor IPR001224 355 365 PR00752 Vasopressin V1A receptor IPR001224 366 381 PR00752 Vasopressin V1A receptor HMMPfam IPR000276 68 348 PF00001 GPCR IPR015076 372 418 PF08983 Domain of unknown function DUF1856 ProfileScan IPR017452 68 348 PS50262 GPCR
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 53 LEIAVLAVTFAVAVLGNSSVLLA 75 PRIMARY 23 2 102 FFQVLPQMCWDITYRFRGPDWLC 124 SECONDARY 23 3 128 KHLQVFGMFASAYMLVVMTADRY 150 PRIMARY 23 4 168 RLMIAAAWVLSFVLSTPQYFVFS 190 SECONDARY 23 5 220 MTGGIFVAPVVILGTCYGFICYN 242 PRIMARY 23 6 291 KMTFVIVTAYIVCWAPFFIIQMW 313 PRIMARY 23 7 330 ITITALLGSLNSCCNPWIYMFFS 352 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_000697 418 600821 100.0 100.0 NP_000698 424 600264 51.4 89.2 XP_011532064 389 167055 49.7 89.5 NP_000907 389 167055 49.7 89.5 NP_001287864 390 608584,608595 30.4 84.2 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB9000 Download>KIBB9000 1254 bp ATGCGTCTCTCCGCCGGTCCCGACGCGGGGCCCTCGGGCAACTCCAGCCCATGGTGGCCT CTGGCCACCGGCGCTGGCAACACAAGCCGGGAGGCCGAAGCCCTCGGGGAGGGCAACGGC CCACCGAGGGACGTGCGCAACGAGGAGCTGGCCAAACTGGAGATCGCCGTGCTGGCGGTG ACTTTCGCGGTGGCCGTGCTGGGCAACAGCAGCGTACTGCTGGCTCTGCACCGGACGCCG CGCAAGACGTCCCGCATGCACCTCTTCATCCGACACCTCAGCCTGGCCGACCTGGCCGTG GCATTCTTCCAGGTGCTGCCGCAAATGTGCTGGGACATCACCTACCGCTTCCGCGGCCCC GACTGGCTGTGCCGCGTGGTGAAGCACCTGCAGGTGTTCGGCATGTTCGCGTCGGCCTAC ATGCTGGTAGTCATGACAGCCGACCGCTACATCGCGGTGTGCCACCCGCTCAAGACTCTG CAACAGCCCGCGCGCCGCTCGCGCCTCATGATCGCGGCCGCCTGGGTGCTGAGCTTCGTG CTGAGCACGCCGCAGTACTTCGTCTTCTCCATGATCGAGGTGAACAATGTCACCAAGGCC CGCGACTGCTGGGCCACCTTCATCCAGCCCTGGGGTTCTCGTGCCTACGTGACCTGGATG ACGGGCGGCATCTTTGTGGCGCCCGTGGTCATCTTGGGTACCTGCTACGGCTTCATCTGC TACAACATCTGGTGCAACGTCCGCGGGAAGACGGCGTCGCGCCAGAGCAAGGGTGCAGAG CAAGCGGGTGTGGCCTTCCAAAAGGGGTTCCTGCTCGCACCCTGTGTCAGCAGCGTGAAG TCCATTTCCCGGGCCAAGATCCGCACGGTGAAGATGACTTTTGTGATCGTGACGGCTTAC ATCGTCTGCTGGGCGCCTTTCTTCATCATCCAGATGTGGTCTGTCTGGGATCCCATGTCC GTCTGGACCGAATCGGAAAACCCTACCATCACCATCACTGCATTACTGGGTTCCTTGAAT AGCTGCTGTAATCCCTGGATATACATGTTTTTTAGTGGCCATCTCCTTCAAGACTGTGTT CAAAGCTTCCCATGCTGCCAAAACATGAAGGAAAAATTCAACAAAGAAGATACTGACAGT ATGAGCAGAAGACAGACTTTTTATTCTAACAATCGAAGCCCAACAAACAGTACGGGTATG TGGAAGGACTCGCCTAAATCTTCCAAGTCCATCAAATTCATTCCTGTTTCAACT
Cloned ORF protein sequence for pF1KB9000 Download>KIBB9000 418 aa MRLSAGPDAGPSGNSSPWWPLATGAGNTSREAEALGEGNGPPRDVRNEELAKLEIAVLAV TFAVAVLGNSSVLLALHRTPRKTSRMHLFIRHLSLADLAVAFFQVLPQMCWDITYRFRGP DWLCRVVKHLQVFGMFASAYMLVVMTADRYIAVCHPLKTLQQPARRSRLMIAAAWVLSFV LSTPQYFVFSMIEVNNVTKARDCWATFIQPWGSRAYVTWMTGGIFVAPVVILGTCYGFIC YNIWCNVRGKTASRQSKGAEQAGVAFQKGFLLAPCVSSVKSISRAKIRTVKMTFVIVTAY IVCWAPFFIIQMWSVWDPMSVWTESENPTITITALLGSLNSCCNPWIYMFFSGHLLQDCV QSFPCCQNMKEKFNKEDTDSMSRRQTFYSNNRSPTNSTGMWKDSPKSSKSIKFIPVST
Nucleotide Sequence (with vector) for pF1KB9000 Download>pF1KB9000 4367 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCGTCTCTCC GCCGGTCCCGACGCGGGGCCCTCGGGCAACTCCAGCCCATGGTGGCCTCTGGCCACCGGC GCTGGCAACACAAGCCGGGAGGCCGAAGCCCTCGGGGAGGGCAACGGCCCACCGAGGGAC GTGCGCAACGAGGAGCTGGCCAAACTGGAGATCGCCGTGCTGGCGGTGACTTTCGCGGTG GCCGTGCTGGGCAACAGCAGCGTACTGCTGGCTCTGCACCGGACGCCGCGCAAGACGTCC CGCATGCACCTCTTCATCCGACACCTCAGCCTGGCCGACCTGGCCGTGGCATTCTTCCAG GTGCTGCCGCAAATGTGCTGGGACATCACCTACCGCTTCCGCGGCCCCGACTGGCTGTGC CGCGTGGTGAAGCACCTGCAGGTGTTCGGCATGTTCGCGTCGGCCTACATGCTGGTAGTC ATGACAGCCGACCGCTACATCGCGGTGTGCCACCCGCTCAAGACTCTGCAACAGCCCGCG CGCCGCTCGCGCCTCATGATCGCGGCCGCCTGGGTGCTGAGCTTCGTGCTGAGCACGCCG CAGTACTTCGTCTTCTCCATGATCGAGGTGAACAATGTCACCAAGGCCCGCGACTGCTGG GCCACCTTCATCCAGCCCTGGGGTTCTCGTGCCTACGTGACCTGGATGACGGGCGGCATC TTTGTGGCGCCCGTGGTCATCTTGGGTACCTGCTACGGCTTCATCTGCTACAACATCTGG TGCAACGTCCGCGGGAAGACGGCGTCGCGCCAGAGCAAGGGTGCAGAGCAAGCGGGTGTG GCCTTCCAAAAGGGGTTCCTGCTCGCACCCTGTGTCAGCAGCGTGAAGTCCATTTCCCGG GCCAAGATCCGCACGGTGAAGATGACTTTTGTGATCGTGACGGCTTACATCGTCTGCTGG GCGCCTTTCTTCATCATCCAGATGTGGTCTGTCTGGGATCCCATGTCCGTCTGGACCGAA TCGGAAAACCCTACCATCACCATCACTGCATTACTGGGTTCCTTGAATAGCTGCTGTAAT CCCTGGATATACATGTTTTTTAGTGGCCATCTCCTTCAAGACTGTGTTCAAAGCTTCCCA TGCTGCCAAAACATGAAGGAAAAATTCAACAAAGAAGATACTGACAGTATGAGCAGAAGA CAGACTTTTTATTCTAACAATCGAAGCCCAACAAACAGTACGGGTATGTGGAAGGACTCG CCTAAATCTTCCAAGTCCATCAAATTCATTCCTGTTTCAACTGTTTAAACGAATTCGAGC TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGT ATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAA GAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGC GTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAG GTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGT GCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGG AAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCG CTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGG TAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCAC TGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTG GCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGT TACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGG TGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCC TTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTT GGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGG AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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