FADS3 ORF clone FXC11678

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Flexi ORF Clone FXC11678

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Clone info.

Species

human

Clone Name

pF1KE1051 Sequence (with vector) Restriction Map

Product ID

FXC11678

HaloTag Clone PID

FHC11678

ORF Sequence

DNA sequence (1335 bp)
Protein sequence (445 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529172]

Gene

KIEE1051

Symbol

FADS3

Alias : CYB5RP, LLCDL3

Description

fatty acid desaturase 3

Original Clone ID

cp01518

Features of the cloned ORF sequence

Description

Length: 1335 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 445 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8013.1 9.4e-200 100.0 FADS3 CCDS8012.1 9.5e-128 62.6 FADS2 CCDS60808.1 9e-111 64.2 FADS2 CCDS60807.1 9.2e-111 63.0 FADS2 CCDS8011.2 1.4e-103 52.4 FADS1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001199 23 96 PF00173 Cytochrome b5 IPR005804 159 415 PF00487 Fatty acid desaturase ProfileScan IPR001199 20 97 PS50255 Cytochrome b5
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 130 ASPTFFAFLLGHILAMEVLAWLL 152 PRIMARY 23 2 158 PGWVPSALAAFILAISQAQSWCL 180 SECONDARY 23 3 268 FLIGPPLLTLVNFEVENLAYMLV 290 SECONDARY 23 4 309 LSYLPFYGVPGVLLFFVAVRVLE 331 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_068373 445 606150 100.0 100.0 XP_011543325 454 606150 97.8 100.0 XP_016873213 491 606150 97.4 87.2 XP_016873212 500 606150 95.0 87.2 NP_004256 444 606149 62.6 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE1051 Download

>KIEE1051  1335 bp
ATGGGCGGCGTCGGGGAGCCGGGACCGCGGGAGGGACCCGCGCAGCCGGGGGCACCGCTG
CCCACCTTCTGCTGGGAGCAGATCCGCGCGCACGACCAGCCCGGCGACAAGTGGCTGGTC
ATCGAGCGCCGCGTCTACGACATCAGCCGCTGGGCACAGCGGCACCCAGGGGGCAGCCGC
CTCATCGGCCACCACGGCGCTGAGGACGCCACGGATGCCTTCCGTGCCTTCCATCAAGAT
CTCAATTTTGTGCGCAAGTTCCTACAGCCCCTGTTGATTGGAGAGCTGGCTCCGGAAGAA
CCCAGCCAGGATGGACCCCTGAATGCGCAGCTGGTCGAGGACTTCCGAGCCCTGCACCAG
GCAGCCGAGGACATGAAGCTGTTTGATGCCAGTCCCACCTTCTTTGCTTTCCTACTGGGC
CACATCCTGGCCATGGAGGTGCTGGCCTGGCTCCTTATCTACCTCCTGGGTCCTGGCTGG
GTGCCCAGTGCCCTGGCCGCCTTCATCCTGGCCATCTCTCAGGCTCAGTCCTGGTGTCTG
CAGCATGACCTGGGCCATGCCTCCATCTTCAAGAAGTCCTGGTGGAACCACGTGGCCCAG
AAGTTCGTGATGGGGCAGCTAAAGGGCTTCTCCGCCCACTGGTGGAACTTCCGCCACTTC
CAGCACCACGCCAAGCCCAACATCTTCCACAAAGACCCAGACGTGACGGTGGCGCCCGTC
TTCCTCCTGGGGGAGTCATCCGTCGAGTATGGCAAGAAGAAACGCAGATACCTACCCTAC
AACCAGCAGCACCTGTACTTCTTCCTGATCGGCCCGCCGCTGCTCACCCTGGTGAACTTT
GAAGTGGAAAATCTGGCGTACATGCTGGTGTGCATGCAGTGGGCGGATTTGCTCTGGGCC
GCCAGCTTCTATGCCCGCTTCTTCTTATCCTACCTCCCCTTCTACGGCGTCCCTGGGGTG
CTGCTCTTCTTTGTTGCTGTCAGGGTCCTGGAAAGCCACTGGTTCGTGTGGATCACACAG
ATGAACCACATCCCCAAGGAGATCGGCCACGAGAAGCACCGGGACTGGGTCAGCTCTCAG
CTGGCAGCCACCTGCAACGTGGAGCCCTCACTTTTCACCAACTGGTTCAGCGGGCACCTC
AACTTCCAGATCGAGCACCACCTCTTCCCCAGGATGCCGAGACACAACTACAGCCGGGTG
GCCCCGCTGGTCAAGTCGCTGTGTGCCAAGCACGGCCTCAGCTACGAAGTGAAGCCCTTC
CTCACCGCGCTGGTGGACATCGTCAGGTCCCTGAAGAAGTCTGGTGACATCTGGCTGGAC
GCCTACCTCCATCAG

ORF Protein

Cloned ORF protein sequence for pF1KE1051 Download

>KIEE1051  445 aa
MGGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSR
LIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQ
AAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCL
QHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPV
FLLGESSVEYGKKKRRYLPYNQQHLYFFLIGPPLLTLVNFEVENLAYMLVCMQWADLLWA
ASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEIGHEKHRDWVSSQ
LAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKPF
LTALVDIVRSLKKSGDIWLDAYLHQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE1051 Download

>pF1KE1051  4448 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGCGGCGTC
GGGGAGCCGGGACCGCGGGAGGGACCCGCGCAGCCGGGGGCACCGCTGCCCACCTTCTGC
TGGGAGCAGATCCGCGCGCACGACCAGCCCGGCGACAAGTGGCTGGTCATCGAGCGCCGC
GTCTACGACATCAGCCGCTGGGCACAGCGGCACCCAGGGGGCAGCCGCCTCATCGGCCAC
CACGGCGCTGAGGACGCCACGGATGCCTTCCGTGCCTTCCATCAAGATCTCAATTTTGTG
CGCAAGTTCCTACAGCCCCTGTTGATTGGAGAGCTGGCTCCGGAAGAACCCAGCCAGGAT
GGACCCCTGAATGCGCAGCTGGTCGAGGACTTCCGAGCCCTGCACCAGGCAGCCGAGGAC
ATGAAGCTGTTTGATGCCAGTCCCACCTTCTTTGCTTTCCTACTGGGCCACATCCTGGCC
ATGGAGGTGCTGGCCTGGCTCCTTATCTACCTCCTGGGTCCTGGCTGGGTGCCCAGTGCC
CTGGCCGCCTTCATCCTGGCCATCTCTCAGGCTCAGTCCTGGTGTCTGCAGCATGACCTG
GGCCATGCCTCCATCTTCAAGAAGTCCTGGTGGAACCACGTGGCCCAGAAGTTCGTGATG
GGGCAGCTAAAGGGCTTCTCCGCCCACTGGTGGAACTTCCGCCACTTCCAGCACCACGCC
AAGCCCAACATCTTCCACAAAGACCCAGACGTGACGGTGGCGCCCGTCTTCCTCCTGGGG
GAGTCATCCGTCGAGTATGGCAAGAAGAAACGCAGATACCTACCCTACAACCAGCAGCAC
CTGTACTTCTTCCTGATCGGCCCGCCGCTGCTCACCCTGGTGAACTTTGAAGTGGAAAAT
CTGGCGTACATGCTGGTGTGCATGCAGTGGGCGGATTTGCTCTGGGCCGCCAGCTTCTAT
GCCCGCTTCTTCTTATCCTACCTCCCCTTCTACGGCGTCCCTGGGGTGCTGCTCTTCTTT
GTTGCTGTCAGGGTCCTGGAAAGCCACTGGTTCGTGTGGATCACACAGATGAACCACATC
CCCAAGGAGATCGGCCACGAGAAGCACCGGGACTGGGTCAGCTCTCAGCTGGCAGCCACC
TGCAACGTGGAGCCCTCACTTTTCACCAACTGGTTCAGCGGGCACCTCAACTTCCAGATC
GAGCACCACCTCTTCCCCAGGATGCCGAGACACAACTACAGCCGGGTGGCCCCGCTGGTC
AAGTCGCTGTGTGCCAAGCACGGCCTCAGCTACGAAGTGAAGCCCTTCCTCACCGCGCTG
GTGGACATCGTCAGGTCCCTGAAGAAGTCTGGTGACATCTGGCTGGACGCCTACCTCCAT
CAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT