Result of FASTA (ccds) for pF1KE0384
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0384, 489 aa
  1>>>pF1KE0384 489 - 489 aa - 489 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.9921+/-0.000887; mu= 3.7021+/- 0.054
 mean_var=223.3433+/-45.403, 0's: 0 Z-trim(114.3): 10  B-trim: 148 in 1/54
 Lambda= 0.085820
 statistics sampled from 14832 (14841) to 14832 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.456), width:  16
 Scan time:  3.940

The best scores are:                                      opt bits E(32554)
CCDS33647.1 NPTXR gene_id:23467|Hs108|chr22        ( 500) 3277 418.2  1e-116
CCDS5657.1 NPTX2 gene_id:4885|Hs108|chr7           ( 431) 1422 188.5 1.2e-47
CCDS32762.1 NPTX1 gene_id:4884|Hs108|chr17         ( 432) 1266 169.2 8.1e-42
CCDS48004.1 SVEP1 gene_id:79987|Hs108|chr9         (3571)  457 69.7 5.9e-11


>>CCDS33647.1 NPTXR gene_id:23467|Hs108|chr22             (500 aa)
 initn: 3277 init1: 3277 opt: 3277  Z-score: 2209.0  bits: 418.2 E(32554): 1e-116
Smith-Waterman score: 3277; 100.0% identity (100.0% similar) in 489 aa overlap (1-489:12-500)

                          10        20        30        40         
pF1KE0            MLAFLGAVICIIASVPLAASPARALPGGADNASVASGAAASPGPQRSLS
                  :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MKFLAVLLAAGMLAFLGAVICIIASVPLAASPARALPGGADNASVASGAAASPGPQRSLS
               10        20        30        40        50        60

      50        60        70        80        90       100         
pF1KE0 ALHGAGGSAGPPALPGAPAASAHPLPPGPLFSRFLCTPLAAACPSGAQQGDAAGAAPGER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ALHGAGGSAGPPALPGAPAASAHPLPPGPLFSRFLCTPLAAACPSGAQQGDAAGAAPGER
               70        80        90       100       110       120

     110       120       130       140       150       160         
pF1KE0 EELLLLQSTAEQLRQTALQQEARIRADQDTIRELTGKLGRCESGLPRGLQGAGPRRDTMA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EELLLLQSTAEQLRQTALQQEARIRADQDTIRELTGKLGRCESGLPRGLQGAGPRRDTMA
              130       140       150       160       170       180

     170       180       190       200       210       220         
pF1KE0 DGPWDSPALILELEDAVRALRDRIDRLEQELPARVNLSAAPAPVSAVPTGLHSKMDQLEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DGPWDSPALILELEDAVRALRDRIDRLEQELPARVNLSAAPAPVSAVPTGLHSKMDQLEG
              190       200       210       220       230       240

     230       240       250       260       270       280         
pF1KE0 QLLAQVLALEKERVALSHSSRRQRQEVEKELDVLQGRVAELEHGSSAYSPPDAFKISIPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QLLAQVLALEKERVALSHSSRRQRQEVEKELDVLQGRVAELEHGSSAYSPPDAFKISIPI
              250       260       270       280       290       300

     290       300       310       320       330       340         
pF1KE0 RNNYMYARVRKALPELYAFTACMWLRSRSSGTGQGTPFSYSVPGQANEIVLLEAGHEPME
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RNNYMYARVRKALPELYAFTACMWLRSRSSGTGQGTPFSYSVPGQANEIVLLEAGHEPME
              310       320       330       340       350       360

     350       360       370       380       390       400         
pF1KE0 LLINDKVAQLPLSLKDNGWHHICIAWTTRDGLWSAYQDGELQGSGENLAAWHPIKPHGIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LLINDKVAQLPLSLKDNGWHHICIAWTTRDGLWSAYQDGELQGSGENLAAWHPIKPHGIL
              370       380       390       400       410       420

     410       420       430       440       450       460         
pF1KE0 ILGQEQDTLGGRFDATQAFVGDIAQFNLWDHALTPAQVLGIANCTAPLLGNVLPWEDKLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ILGQEQDTLGGRFDATQAFVGDIAQFNLWDHALTPAQVLGIANCTAPLLGNVLPWEDKLV
              430       440       450       460       470       480

     470       480         
pF1KE0 EAFGGATKAAFDVCKGRAKA
       ::::::::::::::::::::
CCDS33 EAFGGATKAAFDVCKGRAKA
              490       500

>>CCDS5657.1 NPTX2 gene_id:4885|Hs108|chr7                (431 aa)
 initn: 1387 init1: 798 opt: 1422  Z-score: 968.7  bits: 188.5 E(32554): 1.2e-47
Smith-Waterman score: 1422; 51.5% identity (77.4% similar) in 429 aa overlap (66-486:12-427)

          40        50        60        70         80              
pF1KE0 SGAAASPGPQRSLSALHGAGGSAGPPALPGAPAASAHPLP-PGPLFSRFLCTPLA-----
                                     : ::.:.  : ::   :::.:: :      
CCDS56                    MLALLAASVALAVAAGAQDSPAPG---SRFVCTALPPEAVH
                                  10        20           30        

      90       100       110       120       130       140         
pF1KE0 AACPSGAQQGDAAGAAPGEREELLLLQSTAEQLRQTALQQEARIRADQDTIRELTGKLGR
       :.::  :.     :.: . .:::   .... :::.:..::.  . :....::::::::.:
CCDS56 AGCPLPAMP--MQGGAQSPEEEL---RAAVLQLRETVVQQKETLGAQREAIRELTGKLAR
       40          50           60        70        80        90   

     150        160        170       180       190       200       
pF1KE0 CESGLPRG-LQGAGPR-RDTMADGPWDSPALILELEDAVRALRDRIDRLEQELPARVNLS
       :: ::  :  .:::   .:::.: : :   .. .:  ....:.::.. ::..: : :. .
CCDS56 CE-GLAGGKARGAGATGKDTMGDLPRDPGHVVEQLSRSLQTLKDRLESLEHQLRANVSNA
            100       110       120       130       140       150  

       210       220       230       240       250       260       
pF1KE0 AAPAPVSAVPTGLHSKMDQLEGQLLAQVLALEKERVALSHSSRRQRQEVEKELDVLQGRV
       . :.    :   :.... .:: ::: .:  :: :.  : . .  .::..:. :..:  ::
CCDS56 GLPGDFREV---LQQRLGELERQLLRKVAELEDEKSLLHNETSAHRQKTESTLNALLQRV
            160          170       180       190       200         

       270       280       290       300       310       320       
pF1KE0 AELEHGSSAYSPPDAFKISIPIRNNYMYARVRKALPELYAFTACMWLRSRSSGTGQGTPF
       .:::.:.::.. :::::.:.:.:.::.:....:.:::::::: :.:::: :.. : ::::
CCDS56 TELERGNSAFKSPDAFKVSLPLRTNYLYGKIKKTLPELYAFTICLWLRS-SASPGIGTPF
     210       220       230       240       250        260        

       330       340       350       360       370       380       
pF1KE0 SYSVPGQANEIVLLEAGHEPMELLINDKVAQLPLSLKDNGWHHICIAWTTRDGLWSAYQD
       ::.::::::::::.: :..:.::::::::::::: ..:. :::::..::::::.: :.::
CCDS56 SYAVPGQANEIVLIEWGNNPIELLINDKVAQLPLFVSDGKWHHICVTWTTRDGMWEAFQD
      270       280       290       300       310       320        

       390       400       410       420       430       440       
pF1KE0 GELQGSGENLAAWHPIKPHGILILGQEQDTLGGRFDATQAFVGDIAQFNLWDHALTPAQV
       ::  :.::::: :::::: :.:::::::::.::::::::::::...:::.::..:   ..
CCDS56 GEKLGTGENLAPWHPIKPGGVLILGQEQDTVGGRFDATQAFVGELSQFNIWDRVLRAQEI
      330       340       350       360       370       380        

       450       460       470       480          
pF1KE0 LGIANCTAPLLGNVLPWEDKLVEAFGGATKAAFDVCKGRAKA 
       ..::::.. . ::..:: :. :..::::.:   ..:. :    
CCDS56 VNIANCSTNMPGNIIPWVDNNVDVFGGASKWPVETCEERLLDL
      390       400       410       420       430 

>>CCDS32762.1 NPTX1 gene_id:4884|Hs108|chr17              (432 aa)
 initn: 1128 init1: 690 opt: 1266  Z-score: 864.3  bits: 169.2 E(32554): 8.1e-42
Smith-Waterman score: 1266; 48.7% identity (74.8% similar) in 421 aa overlap (77-484:26-429)

         50        60        70        80        90       100      
pF1KE0 SLSALHGAGGSAGPPALPGAPAASAHPLPPGPLFSRFLCTPLAAACPSGAQQGDAAGAAP
                                     ::  .::.:: .    :  :..  :. :: 
CCDS32      MPAGRAARTCALLALCLLGAGAQDFGP--TRFICTSV----PVDADMCAASVAAG
                    10        20          30            40         

        110       120       130       140       150                
pF1KE0 GEREELLLLQSTAEQLRQTALQQEARIRADQDTIRELTGKLGRCES--------GLPR--
       : .:    :.:.. :::.:.:::.  : ....::::::.:::::::        :  :  
CCDS32 GAEE----LRSSVLQLRETVLQQKETILSQKETIRELTAKLGRCESQSTLDPGAGEARAG
      50            60        70        80        90       100     

         160       170       180        190       200       210    
pF1KE0 -GLQGAGPRRDTMADGPWDSPALIL-ELEDAVRALRDRIDRLEQELPARVNLSAAPAPVS
        : .  :  ..::.:      :  : .: .....:. :.. :::   .:.: :.    ..
CCDS32 GGRKQPGSGKNTMGDLSRTPAAETLSQLGQTLQSLKTRLENLEQY--SRLNSSSQTNSLK
         110       120       130       140       150         160   

          220       230       240       250       260       270    
pF1KE0 AVPTGLHSKMDQLEGQLLAQVLALEKERVALSHSSRRQRQEVEKELDVLQGRVAELEHGS
        .   :.::.:.:: :.:..: .::. . .  ... ..: ..:  :  :. :..:::.:.
CCDS32 DL---LQSKIDELERQVLSRVNTLEEGKGG-PRNDTEERVKIETALTSLHQRISELEKGQ
              170       180       190        200       210         

          280       290       300       310       320       330    
pF1KE0 SAYSPPDAFKISIPIRNNYMYARVRKALPELYAFTACMWLRSRSSGTGQGTPFSYSVPGQ
       .   : : :....:.:.:::::.:.:.:::.::::.::::.: :.  : ::::::.::::
CCDS32 KDNRPGDKFQLTFPLRTNYMYAKVKKSLPEMYAFTVCMWLKS-SATPGVGTPFSYAVPGQ
     220       230       240       250       260        270        

          340       350       360       370       380       390    
pF1KE0 ANEIVLLEAGHEPMELLINDKVAQLPLSLKDNGWHHICIAWTTRDGLWSAYQDGELQGSG
       :::.::.: :..:::.:::::::.::. ..:. :::::..::::::.: :::::   :::
CCDS32 ANELVLIEWGNNPMEILINDKVAKLPFVINDGKWHHICVTWTTRDGVWEAYQDGTQGGSG
      280       290       300       310       320       330        

          400       410       420       430       440       450    
pF1KE0 ENLAAWHPIKPHGILILGQEQDTLGGRFDATQAFVGDIAQFNLWDHALTPAQVLGIANC-
       :::: .:::::.:.:.:::::::::: :::::::::..:.::.::. :::..: ..:.: 
CCDS32 ENLAPYHPIKPQGVLVLGQEQDTLGGGFDATQAFVGELAHFNIWDRKLTPGEVYNLATCS
      340       350       360       370       380       390        

           460       470       480         
pF1KE0 TAPLLGNVLPWEDKLVEAFGGATKAAFDVCKGRAKA
       :  : :::. : .. .: .::::: .:..:.     
CCDS32 TKALSGNVIAWAESHIEIYGGATKWTFEACRQIN  
      400       410       420       430    

>>CCDS48004.1 SVEP1 gene_id:79987|Hs108|chr9              (3571 aa)
 initn: 376 init1: 331 opt: 457  Z-score: 310.2  bits: 69.7 E(32554): 5.9e-11
Smith-Waterman score: 457; 39.0% identity (69.2% similar) in 195 aa overlap (283-473:1426-1617)

            260       270       280       290       300       310  
pF1KE0 RQEVEKELDVLQGRVAELEHGSSAYSPPDAFKISIPIRNNYMYARVRKALPELYAFTACM
                                     :.... . . : :. .   :: :.:.:  .
CCDS48 ATCVDELNSYSCKCQPGFSGKRCETEQSTGFNLDFEVSGIYGYVMLDGMLPSLHALTCTF
        1400      1410      1420      1430      1440      1450     

            320       330       340       350         360       370
pF1KE0 WLRSRSSGTGQGTPFSYSVPGQANEIVLLEAGHEPMELLIN--DKVAQLPLSLKDNGWHH
       :..: :.  . :::.::.: . ... .:: . ..   : .:  .:... : :..:. :::
CCDS48 WMKS-SDDMNYGTPISYAVDNGSDNTLLL-TDYNGWVLYVNGREKITNCP-SVNDGRWHH
         1460      1470      1480       1490      1500       1510  

              380       390       400       410       420       430
pF1KE0 ICIAWTTRDGLWSAYQDGELQGSGENLAAWHPIKPHGILILGQEQDTLGGRFDATQAFVG
       : :.::. .:.:..: ::.:. .: .:..  ::   : :.::::::  :  :. ...:::
CCDS48 IAITWTSANGIWKVYIDGKLSDGGAGLSVGLPIPGGGALVLGQEQDKKGEGFSPAESFVG
           1520      1530      1540      1550      1560      1570  

              440       450         460       470       480        
pF1KE0 DIAQFNLWDHALTPAQVLGIA-NCTAPLL-GNVLPWEDKLVEAFGGATKAAFDVCKGRAK
       .:.:.::::..:.: :: ..: .:   :  :::: : : :    :               
CCDS48 SISQLNLWDYVLSPQQVKSLATSCPEELSKGNVLAWPDFLSGIVGKVKIDSKSIFCSDCP
           1580      1590      1600      1610      1620      1630  

                                                                   
pF1KE0 A                                                           
                                                                   
CCDS48 RLGGSVPHLRTASEDLKPGSKVNLFCDPGFQLVGNPVQYCLNQGQWTQPLPHCERISCGV
           1640      1650      1660      1670      1680      1690  




489 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 13:02:25 2016 done: Thu Nov  3 13:02:26 2016
 Total Scan time:  3.940 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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