KRT20 ORF clone FXC10267

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC10267

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Clone info.

Species

human

Clone Name

pF1KB6659 Sequence (with vector) Restriction Map

Product ID

FXC10267

HaloTag Clone PID

FHC10267

ORF Sequence

DNA sequence (1272 bp)
Protein sequence (424 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528550]

Gene

KIBB6659

Symbol

KRT20

Alias : CD20, CK-20, CK20, K20, KRT21

Description

keratin 20, type I

Original Clone ID

cs01259

Features of the cloned ORF sequence

Description

Length: 1272 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 424 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11379.1 2.9e-82 100.0 KRT20 CCDS11402.1 6.6e-38 52.7 KRT17 CCDS11400.1 1.2e-37 53.8 KRT14 CCDS11398.1 8e-35 50.1 KRT15 CCDS11401.1 8.2e-35 49.9 KRT16 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR002957 148 161 PR01248 Keratin IPR002957 169 192 PR01248 Keratin IPR002957 223 243 PR01248 Keratin IPR002957 295 310 PR01248 Keratin IPR002957 321 347 PR01248 Keratin HMMPfam IPR016044 69 379 PF00038 Filament
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_061883 424 608218 100.0 100.0 NP_000413 432 148069,167210,184500 52.7 91.3 NP_005548 473 148067,167200,613000 49.9 90.1 NP_002266 456 148030 50.1 92.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6659 Download

>KIBB6659  1272 bp
ATGGATTTCAGTCGCAGAAGCTTCCACAGAAGCCTGAGCTCCTCCTTGCAGGCCCCTGTA
GTCAGTACAGTGGGCATGCAGCGCCTCGGGACGACACCCAGCGTTTATGGGGGTGCTGGA
GGCCGGGGCATCCGCATCTCCAACTCCAGACACACGGTGAACTATGGGAGCGATCTCACA
GGCGGCGGGGACCTGTTTGTTGGCAATGAGAAAATGGCCATGCAGAACCTAAATGACCGT
CTAGCGAGCTACCTAGAAAAGGTGCGGACCCTGGAGCAGTCCAACTCCAAACTTGAAGTG
CAAATCAAGCAGTGGTACGAAACCAACGCCCCGAGGGCTGGTCGCGACTACAGTGCATAT
TACAGACAAATTGAAGAGCTGCGAAGTCAGATTAAGGATGCTCAACTGCAAAATGCTCGG
TGTGTCCTGCAAATTGATAATGCTAAACTGGCTGCTGAGGACTTCAGACTGAAGTATGAG
ACTGAGAGAGGAATACGTCTAACAGTGGAAGCTGATCTCCAAGGCCTGAATAAGGTCTTT
GATGACCTAACCCTACATAAAACAGATTTGGAGATTCAAATTGAAGAACTGAATAAAGAC
CTAGCTCTCCTCAAAAAGGAGCATCAGGAGGAAGTCGATGGCCTACACAAGCATCTGGGC
AACACTGTCAATGTGGAGGTTGATGCTGCTCCAGGCCTGAACCTTGGCGTCATCATGAAT
GAAATGAGGCAGAAGTATGAAGTCATGGCCCAGAAGAACCTTCAAGAGGCCAAAGAACAG
TTTGAGAGACAGACTGCAGTTCTGCAGCAACAGGTCACAGTGAATACTGAAGAATTAAAA
GGAACTGAGGTTCAACTAACGGAGCTGAGACGCACCTCCCAGAGCCTTGAGATAGAACTC
CAGTCCCATCTCAGCATGAAAGAGTCTTTGGAGCACACTCTAGAGGAGACCAAGGCCCGT
TACAGCAGCCAGTTAGCCAACCTCCAGTCGCTGTTGAGCTCTCTGGAGGCCCAACTGATG
CAGATTCGGAGTAACATGGAACGCCAGAACAACGAATACCATATCCTTCTTGACATAAAG
ACTCGACTTGAACAGGAAATTGCTACTTACCGCCGCCTTCTGGAAGGAGAAGACGTAAAA
ACTACAGAATATCAGTTAAGCACCCTGGAAGAGAGAGATATAAAGAAAACCAGGAAGATT
AAGACAGTCGTGCAAGAAGTAGTGGATGGCAAGGTCGTGTCATCTGAAGTCAAAGAGGTG
GAAGAAAATATC

ORF Protein

Cloned ORF protein sequence for pF1KB6659 Download

>KIBB6659  424 aa
MDFSRRSFHRSLSSSLQAPVVSTVGMQRLGTTPSVYGGAGGRGIRISNSRHTVNYGSDLT
GGGDLFVGNEKMAMQNLNDRLASYLEKVRTLEQSNSKLEVQIKQWYETNAPRAGRDYSAY
YRQIEELRSQIKDAQLQNARCVLQIDNAKLAAEDFRLKYETERGIRLTVEADLQGLNKVF
DDLTLHKTDLEIQIEELNKDLALLKKEHQEEVDGLHKHLGNTVNVEVDAAPGLNLGVIMN
EMRQKYEVMAQKNLQEAKEQFERQTAVLQQQVTVNTEELKGTEVQLTELRRTSQSLEIEL
QSHLSMKESLEHTLEETKARYSSQLANLQSLLSSLEAQLMQIRSNMERQNNEYHILLDIK
TRLEQEIATYRRLLEGEDVKTTEYQLSTLEERDIKKTRKIKTVVQEVVDGKVVSSEVKEV
EENI

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6659 Download

>pF1KB6659  4385 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGATTTCAGT
CGCAGAAGCTTCCACAGAAGCCTGAGCTCCTCCTTGCAGGCCCCTGTAGTCAGTACAGTG
GGCATGCAGCGCCTCGGGACGACACCCAGCGTTTATGGGGGTGCTGGAGGCCGGGGCATC
CGCATCTCCAACTCCAGACACACGGTGAACTATGGGAGCGATCTCACAGGCGGCGGGGAC
CTGTTTGTTGGCAATGAGAAAATGGCCATGCAGAACCTAAATGACCGTCTAGCGAGCTAC
CTAGAAAAGGTGCGGACCCTGGAGCAGTCCAACTCCAAACTTGAAGTGCAAATCAAGCAG
TGGTACGAAACCAACGCCCCGAGGGCTGGTCGCGACTACAGTGCATATTACAGACAAATT
GAAGAGCTGCGAAGTCAGATTAAGGATGCTCAACTGCAAAATGCTCGGTGTGTCCTGCAA
ATTGATAATGCTAAACTGGCTGCTGAGGACTTCAGACTGAAGTATGAGACTGAGAGAGGA
ATACGTCTAACAGTGGAAGCTGATCTCCAAGGCCTGAATAAGGTCTTTGATGACCTAACC
CTACATAAAACAGATTTGGAGATTCAAATTGAAGAACTGAATAAAGACCTAGCTCTCCTC
AAAAAGGAGCATCAGGAGGAAGTCGATGGCCTACACAAGCATCTGGGCAACACTGTCAAT
GTGGAGGTTGATGCTGCTCCAGGCCTGAACCTTGGCGTCATCATGAATGAAATGAGGCAG
AAGTATGAAGTCATGGCCCAGAAGAACCTTCAAGAGGCCAAAGAACAGTTTGAGAGACAG
ACTGCAGTTCTGCAGCAACAGGTCACAGTGAATACTGAAGAATTAAAAGGAACTGAGGTT
CAACTAACGGAGCTGAGACGCACCTCCCAGAGCCTTGAGATAGAACTCCAGTCCCATCTC
AGCATGAAAGAGTCTTTGGAGCACACTCTAGAGGAGACCAAGGCCCGTTACAGCAGCCAG
TTAGCCAACCTCCAGTCGCTGTTGAGCTCTCTGGAGGCCCAACTGATGCAGATTCGGAGT
AACATGGAACGCCAGAACAACGAATACCATATCCTTCTTGACATAAAGACTCGACTTGAA
CAGGAAATTGCTACTTACCGCCGCCTTCTGGAAGGAGAAGACGTAAAAACTACAGAATAT
CAGTTAAGCACCCTGGAAGAGAGAGATATAAAGAAAACCAGGAAGATTAAGACAGTCGTG
CAAGAAGTAGTGGATGGCAAGGTCGTGTCATCTGAAGTCAAAGAGGTGGAAGAAAATATC
GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA
AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA
GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA
AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA
TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT
AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT
GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA
GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG
GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA
TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG
GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC
GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT
GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT
CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC
GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC
ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC
CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG
GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG
GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT
ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG
GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA
TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC
TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC
AAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATC
AGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAA
AAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAA
TCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCC
CCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTC
CGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAG
TTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGA
CCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATC
GCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTAC
AGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTG
CGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACA
AACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAA
AGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAA
CTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTT
ATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG
AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT
AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT
TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA
TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA
GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT
TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT
GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT
GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT
CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA
CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG
GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC
TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCAT