KDM4D ORF clone FXC06842

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Flexi ORF Clone FXC06842

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Clone info.

Species

human

Clone Name

pF1KB9610 Sequence (with vector) Restriction Map

Product ID

FXC06842

HaloTag Clone PID

FHC06842

ORF Sequence

DNA sequence (1569 bp)
Protein sequence (523 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587595]

Gene

KIBB9610

Symbol

KDM4D

Alias : JMJD2D

Description

lysine (K)-specific demethylase 4D

Original Clone ID

cp00193

Features of the cloned ORF sequence

Description

Length: 1569 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 523 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8302.1 3.7e-148 100.0 KDM4D CCDS44713.1 3.9e-87 67.6 KDM4E CCDS12138.1 1e-74 54.8 KDM4B CCDS55286.1 1.9e-67 51.2 KDM4C CCDS55285.1 2e-67 51.2 KDM4C The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003349 19 53 PF02375 Transcription factor jumonji IPR013129 179 295 PF02373 Transcription factor jumonji HMMSmart IPR003349 17 59 SM00545 Transcription factor jumonji IPR003347 146 312 SM00558 Transcription factor jumonji/aspartyl beta-hydroxylase ProfileScan IPR003349 18 60 PS51183 Transcription factor jumonji IPR003347 146 312 PS51184 Transcription factor jumonji/aspartyl beta-hydroxylase
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_060509 523 609766 100.0 100.0 NP_001155102 506 616581 67.6 93.9 NP_055830 1096 609765 54.8 97.9 XP_005259578 1130 609765 54.6 99.4 XP_016881992 1130 609765 54.6 99.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9610 Download

>KIBB9610  1569 bp
ATGGAAACTATGAAGTCTAAGGCCAACTGTGCCCAGAATCCAAATTGTAACATAATGATA
TTTCATCCAACCAAAGAAGAGTTTAATGATTTTGATAAATATATTGCTTACATGGAATCC
CAAGGTGCACACAGAGCTGGCTTGGCTAAGATAATTCCACCCAAAGAATGGAAAGCCAGA
GAGACCTATGATAATATCAGTGAAATCTTAATAGCCACTCCCCTCCAGCAGGTGGCCTCT
GGGCGGGCAGGGGTGTTTACTCAATACCATAAAAAAAAGAAAGCCATGACTGTGGGGGAG
TATCGCCATTTGGCAAACAGTAAAAAATATCAGACTCCACCACACCAGAATTTCGAAGAT
TTGGAGCGAAAATACTGGAAGAACCGCATCTATAATTCACCGATTTATGGTGCTGACATC
AGTGGCTCCTTGTTTGATGAAAACACTAAACAATGGAATCTTGGGCACCTGGGAACAATT
CAGGACCTGCTGGAAAAGGAATGTGGGGTTGTCATAGAAGGCGTCAATACACCCTACTTG
TACTTTGGCATGTGGAAAACCACGTTTGCTTGGCATACAGAGGACATGGACCTTTACAGC
ATCAACTACCTGCACCTTGGGGAGCCCAAAACTTGGTATGTGGTGCCCCCAGAACATGGC
CAGCGCCTGGAACGCCTGGCCAGGGAGCTCTTCCCAGGCAGTTCCCGGGGTTGTGGGGCC
TTCCTGCGGCACAAGGTGGCCCTCATCTCGCCTACAGTTCTCAAGGAAAATGGGATTCCC
TTCAATCGCATAACTCAGGAGGCTGGAGAGTTCATGGTGACCTTTCCCTATGGCTACCAT
GCTGGCTTCAACCATGGTTTCAACTGCGCAGAGGCCATCAATTTTGCCACTCCGCGATGG
ATTGATTATGGCAAAATGGCCTCCCAGTGTAGCTGTGGGGAGGCAAGGGTGACCTTTTCC
ATGGATGCCTTCGTGCGCATCCTGCAACCTGAACGCTATGACCTGTGGAAACGTGGGCAA
GACCGGGCAGTTGTGGACCACATGGAGCCCAGGGTACCAGCCAGCCAAGAGCTGAGCACC
CAGAAGGAAGTCCAGTTACCCAGGAGAGCAGCGCTGGGCCTGAGACAACTCCCTTCCCAC
TGGGCCCGGCATTCCCCTTGGCCTATGGCTGCCCGCAGTGGGACACGGTGCCACACCCTT
GTGTGCTCTTCACTCCCACGCCGATCTGCAGTTAGTGGCACTGCTACGCAGCCCCGGGCT
GCTGCTGTCCACAGCTCTAAGAAGCCCAGCTCAACTCCATCATCCACCCCTGGTCCATCT
GCACAGATTATCCACCCGTCAAATGGCAGACGTGGTCGTGGTCGCCCTCCTCAGAAACTG
AGAGCTCAGGAGCTGACCCTCCAGACTCCAGCCAAGAGGCCCCTCTTGGCGGGCACAACA
TGCACAGCTTCGGGCCCAGAACCTGAGCCCCTACCTGAGGATGGGGCTTTGATGGACAAG
CCTGTACCACTGAGCCCAGGGCTCCAGCATCCTGTCAAGGCTTCTGGGTGCAGCTGGGCC
CCTGTGCCC

ORF Protein

Cloned ORF protein sequence for pF1KB9610 Download

>KIBB9610  523 aa
METMKSKANCAQNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKAR
ETYDNISEILIATPLQQVASGRAGVFTQYHKKKKAMTVGEYRHLANSKKYQTPPHQNFED
LERKYWKNRIYNSPIYGADISGSLFDENTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYL
YFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGA
FLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRW
IDYGKMASQCSCGEARVTFSMDAFVRILQPERYDLWKRGQDRAVVDHMEPRVPASQELST
QKEVQLPRRAALGLRQLPSHWARHSPWPMAARSGTRCHTLVCSSLPRRSAVSGTATQPRA
AAVHSSKKPSSTPSSTPGPSAQIIHPSNGRRGRGRPPQKLRAQELTLQTPAKRPLLAGTT
CTASGPEPEPLPEDGALMDKPVPLSPGLQHPVKASGCSWAPVP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9610 Download

>pF1KB9610  4682 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAAACTATG
AAGTCTAAGGCCAACTGTGCCCAGAATCCAAATTGTAACATAATGATATTTCATCCAACC
AAAGAAGAGTTTAATGATTTTGATAAATATATTGCTTACATGGAATCCCAAGGTGCACAC
AGAGCTGGCTTGGCTAAGATAATTCCACCCAAAGAATGGAAAGCCAGAGAGACCTATGAT
AATATCAGTGAAATCTTAATAGCCACTCCCCTCCAGCAGGTGGCCTCTGGGCGGGCAGGG
GTGTTTACTCAATACCATAAAAAAAAGAAAGCCATGACTGTGGGGGAGTATCGCCATTTG
GCAAACAGTAAAAAATATCAGACTCCACCACACCAGAATTTCGAAGATTTGGAGCGAAAA
TACTGGAAGAACCGCATCTATAATTCACCGATTTATGGTGCTGACATCAGTGGCTCCTTG
TTTGATGAAAACACTAAACAATGGAATCTTGGGCACCTGGGAACAATTCAGGACCTGCTG
GAAAAGGAATGTGGGGTTGTCATAGAAGGCGTCAATACACCCTACTTGTACTTTGGCATG
TGGAAAACCACGTTTGCTTGGCATACAGAGGACATGGACCTTTACAGCATCAACTACCTG
CACCTTGGGGAGCCCAAAACTTGGTATGTGGTGCCCCCAGAACATGGCCAGCGCCTGGAA
CGCCTGGCCAGGGAGCTCTTCCCAGGCAGTTCCCGGGGTTGTGGGGCCTTCCTGCGGCAC
AAGGTGGCCCTCATCTCGCCTACAGTTCTCAAGGAAAATGGGATTCCCTTCAATCGCATA
ACTCAGGAGGCTGGAGAGTTCATGGTGACCTTTCCCTATGGCTACCATGCTGGCTTCAAC
CATGGTTTCAACTGCGCAGAGGCCATCAATTTTGCCACTCCGCGATGGATTGATTATGGC
AAAATGGCCTCCCAGTGTAGCTGTGGGGAGGCAAGGGTGACCTTTTCCATGGATGCCTTC
GTGCGCATCCTGCAACCTGAACGCTATGACCTGTGGAAACGTGGGCAAGACCGGGCAGTT
GTGGACCACATGGAGCCCAGGGTACCAGCCAGCCAAGAGCTGAGCACCCAGAAGGAAGTC
CAGTTACCCAGGAGAGCAGCGCTGGGCCTGAGACAACTCCCTTCCCACTGGGCCCGGCAT
TCCCCTTGGCCTATGGCTGCCCGCAGTGGGACACGGTGCCACACCCTTGTGTGCTCTTCA
CTCCCACGCCGATCTGCAGTTAGTGGCACTGCTACGCAGCCCCGGGCTGCTGCTGTCCAC
AGCTCTAAGAAGCCCAGCTCAACTCCATCATCCACCCCTGGTCCATCTGCACAGATTATC
CACCCGTCAAATGGCAGACGTGGTCGTGGTCGCCCTCCTCAGAAACTGAGAGCTCAGGAG
CTGACCCTCCAGACTCCAGCCAAGAGGCCCCTCTTGGCGGGCACAACATGCACAGCTTCG
GGCCCAGAACCTGAGCCCCTACCTGAGGATGGGGCTTTGATGGACAAGCCTGTACCACTG
AGCCCAGGGCTCCAGCATCCTGTCAAGGCTTCTGGGTGCAGCTGGGCCCCTGTGCCCGTT
TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC
TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA
ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG
AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT
AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC
CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT
CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA
TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT
TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA
CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG
GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG
TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC
CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT
TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA
GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG
GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA
GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT
GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG
CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC
ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC
CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG
GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC
TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAG
CGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGG
GGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAA
GGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCG
ACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC
TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGC
CTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTC
GGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG
CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCC
ACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGA
GTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGC
TCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAAC
CACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGG
ATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTC
ACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATA
GTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAA
AATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGG
TATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGC
CATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTA
AGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTA
CTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAA
ATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGT
CCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG
GTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGA
AAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAA
ATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAC
GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTT
TTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
AT