RAP1GDS1 ORF clone FXC06589

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Flexi ORF Clone FXC06589

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Clone info.

Species

human

Clone Name

pF1KB5988 Sequence (with vector) Restriction Map

Product ID

FXC06589

HaloTag Clone PID

FHC06589

ORF Sequence

DNA sequence (1674 bp)
Protein sequence (558 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464126]

Gene

KIBB5988

Symbol

RAP1GDS1

Alias : GDS1, SmgGDS

Description

RAP1, GTP-GDP dissociation stimulator 1, transcript variant 5

Original Clone ID

cs00688

Features of the cloned ORF sequence

Description

Length: 1674 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 558 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43254.1 0 100.0 RAP1GDS1 CCDS47107.1 0 100.0 RAP1GDS1 CCDS43253.1 1.5e-178 91.7 RAP1GDS1 CCDS47105.1 1.5e-178 91.7 RAP1GDS1 CCDS47106.1 2.1e-177 91.5 RAP1GDS1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000225 83 117 PF00514 Armadillo IPR000225 123 161 PF00514 Armadillo IPR000225 297 340 PF00514 Armadillo IPR000225 432 469 PF00514 Armadillo HMMSmart IPR000225 77 118 SM00185 Armadillo IPR000225 119 162 SM00185 Armadillo IPR000225 297 341 SM00185 Armadillo IPR000225 342 382 SM00185 Armadillo IPR000225 430 470 SM00185 Armadillo ProfileScan IPR000225 89 131 PS50176 Armadillo IPR000225 308 340 PS50176 Armadillo
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001093899 558 179502 100.0 100.0 NP_001093898 559 179502 100.0 99.8 NP_001093897 607 179502 91.7 97.0 NP_001093896 608 179502 91.7 97.0 NP_066982 607 179502 91.5 97.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5988 Download

>KIBB5988  1674 bp
ATGGATAATCTCAGTGATACCTTGAAGAAGCTGAAGATAACAGCTGTTGACAAGACTGAG
GATAGTTTAGAAGGATGCTTGGATTGTCTGCTTCAAGCCCTGGCTCAAAATAATACGGAA
ACAAGTGAAAAAATCCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCA
CAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGAGTTT
ATGCGAATTCCATGTGTGGATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGC
AAAGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACGATAGC
CATTCGCTTCAAGCTCAGCTTATCAATATGGGTGTTATTCCTACCTTAGTGAAATTACTG
GGCATCCACTGCCAAAATGCAGCTCTTACAGAAATGTGTCTTGTTGCATTTGGTAATTTA
GCAGAACTTGAGTCAAGTAAAGAACAGTTTGCCAGTACAAACATTGCTGAAGAGCTAGTA
AAACTCTTCAAGAAACAAATAGAACATGATAAGAGAGAAATGATTTTTGAAGTTCTTGCT
CCATTGGCAGAAAATGATGCTATTAAACTACAGCTGGTTGAAGCAGGCCTAGTAGAGTGT
CTACTAGAGATTGTTCAGCAAAAAGTGGATAGTGACAAAGAAGATGATATTACTGAGCTC
AAAACTGGTTCAGATCTCATGGTTTTATTACTTCTTGGAGATGAATCCATGCAGAAGTTA
TTTGAAGGAGGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTGGATCCCATCAAATAAC
CACCAGCTACAGCTTGCTGGAGCATTGGCAATTGCAAATTTTGCCAGAAATGATGCAAAT
TGTATTCATATGGTAGACAATGGGATTGTAGAAAAACTTATGGATTTACTGGACAGACAT
GTAGAAGATGGAAATGTAACAGTACAGCATGCAGCACTAAGTGCCCTCAGAAACCTGGCC
ATTCCAGTTATAAATAAAGCAAAGATGTTATCAGCTGGGGTCACAGAGGCAGTTTTGAAA
TTTCTTAAATCTGAAATGCCTCCTGTTCAGTTCAAACTTCTGGGAACATTAAGAATGTTA
ATAGATGCACAAGCAGAAGCTGCTGAACAATTGGGAAAGAATGTTAAGTTAGTGGAGCGT
TTGGTGGAATGGTGTGAAGCCAAAGATCATGCTGGTGTGATGGGGGAGTCAAACAGACTG
CTGTCTGCCCTTATACGACACAGTAAATCAAAAGATGTAATTAAAACCATTGTGCAGAGT
GGTGGCATCAAGCATCTAGTTACCATGGCAACTAGTGAACATGTAATAATGCAGAATGAA
GCTCTTGTTGCTTTGGCATTAATAGCAGCTTTAGAATTGGGCACTGCTGAGAAAGATCTA
GAAAGTGCTAAACTTGTACAGATTTTACATAGACTGCTAGCAGATGAGAGAAGTGCTCCT
GAAATCAAATATAATTCCATGGTCCTGATATGTGCTCTTATGGGATCTGAATGTCTACAC
AAGGAAGTACAGGATTTGGCTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATGAGAAC
AAAAGTGTTGCCCAGCAGGCCTCTCTCACAGAGCAGAGACTTACTGTGGAAAGC

ORF Protein

Cloned ORF protein sequence for pF1KB5988 Download

>KIBB5988  558 aa
MDNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTP
QSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDS
HSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELV
KLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITEL
KTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDAN
CIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLK
FLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRL
LSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDL
ESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHEN
KSVAQQASLTEQRLTVES

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5988 Download

>pF1KB5988  4787 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGATAATCTC
AGTGATACCTTGAAGAAGCTGAAGATAACAGCTGTTGACAAGACTGAGGATAGTTTAGAA
GGATGCTTGGATTGTCTGCTTCAAGCCCTGGCTCAAAATAATACGGAAACAAGTGAAAAA
ATCCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGC
AAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGAGTTTATGCGAATTCCA
TGTGTGGATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGACCAGGAA
GTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACGATAGCCATTCGCTTCAA
GCTCAGCTTATCAATATGGGTGTTATTCCTACCTTAGTGAAATTACTGGGCATCCACTGC
CAAAATGCAGCTCTTACAGAAATGTGTCTTGTTGCATTTGGTAATTTAGCAGAACTTGAG
TCAAGTAAAGAACAGTTTGCCAGTACAAACATTGCTGAAGAGCTAGTAAAACTCTTCAAG
AAACAAATAGAACATGATAAGAGAGAAATGATTTTTGAAGTTCTTGCTCCATTGGCAGAA
AATGATGCTATTAAACTACAGCTGGTTGAAGCAGGCCTAGTAGAGTGTCTACTAGAGATT
GTTCAGCAAAAAGTGGATAGTGACAAAGAAGATGATATTACTGAGCTCAAAACTGGTTCA
GATCTCATGGTTTTATTACTTCTTGGAGATGAATCCATGCAGAAGTTATTTGAAGGAGGA
AAAGGTAGTGTATTTCAAAGGGTACTCTCTTGGATCCCATCAAATAACCACCAGCTACAG
CTTGCTGGAGCATTGGCAATTGCAAATTTTGCCAGAAATGATGCAAATTGTATTCATATG
GTAGACAATGGGATTGTAGAAAAACTTATGGATTTACTGGACAGACATGTAGAAGATGGA
AATGTAACAGTACAGCATGCAGCACTAAGTGCCCTCAGAAACCTGGCCATTCCAGTTATA
AATAAAGCAAAGATGTTATCAGCTGGGGTCACAGAGGCAGTTTTGAAATTTCTTAAATCT
GAAATGCCTCCTGTTCAGTTCAAACTTCTGGGAACATTAAGAATGTTAATAGATGCACAA
GCAGAAGCTGCTGAACAATTGGGAAAGAATGTTAAGTTAGTGGAGCGTTTGGTGGAATGG
TGTGAAGCCAAAGATCATGCTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCTGCCCTT
ATACGACACAGTAAATCAAAAGATGTAATTAAAACCATTGTGCAGAGTGGTGGCATCAAG
CATCTAGTTACCATGGCAACTAGTGAACATGTAATAATGCAGAATGAAGCTCTTGTTGCT
TTGGCATTAATAGCAGCTTTAGAATTGGGCACTGCTGAGAAAGATCTAGAAAGTGCTAAA
CTTGTACAGATTTTACATAGACTGCTAGCAGATGAGAGAAGTGCTCCTGAAATCAAATAT
AATTCCATGGTCCTGATATGTGCTCTTATGGGATCTGAATGTCTACACAAGGAAGTACAG
GATTTGGCTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATGAGAACAAAAGTGTTGCC
CAGCAGGCCTCTCTCACAGAGCAGAGACTTACTGTGGAAAGCGTTTAAACGAATTCGAGC
TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA
CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC
CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG
TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC
TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT
CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA
GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG
CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG
ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG
CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC
TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG
CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG
GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC
GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT
CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG
CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC
GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG
CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT
GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC
CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA
GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC
GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC
GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGT
ATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAA
GAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGC
GTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAG
GTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGT
GCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGG
AAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCG
CTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGG
TAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCAC
TGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTG
GCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGT
TACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGG
TGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCC
TTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTT
GGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGG
AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT
GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA
AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT
GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA
TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC
GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG
CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT
GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG
AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC
GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG
ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG
CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA
CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT