KDELR3 ORF clone FXC05579

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC05579

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Clone info.

Species

human

Clone Name

pF1KE0529 Sequence (with vector) Restriction Map

Product ID

FXC05579

HaloTag Clone PID

FHC05579

ORF Sequence

DNA sequence (642 bp)
Protein sequence (214 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528157]

Gene

KIEE0529

Symbol

KDELR3

Alias : ERD2L3

Description

KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3, transcript variant 1

Original Clone ID

oc01229

Features of the cloned ORF sequence

Description

Length: 642 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 214 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13972.1 8.2e-101 100.0 KDELR3 CCDS46705.1 2.1e-94 100.0 KDELR3 CCDS5351.1 3.5e-78 76.8 KDELR2 CCDS12718.1 3.5e-75 73.0 KDELR1 CCDS43550.1 2.8e-36 67.5 KDELR2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000133 4 23 PR00660 ER lumen protein retaining receptor IPR000133 31 51 PR00660 ER lumen protein retaining receptor IPR000133 52 68 PR00660 ER lumen protein retaining receptor IPR000133 120 140 PR00660 ER lumen protein retaining receptor IPR000133 142 156 PR00660 ER lumen protein retaining receptor IPR000133 156 174 PR00660 ER lumen protein retaining receptor IPR000133 184 199 PR00660 ER lumen protein retaining receptor HMMPfam IPR000133 29 170 PF00810 ER lumen protein retaining receptor
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 2 NVFRILGDLSHLLAMILLLGKIW 24 PRIMARY 23 2 33 SGKSQILFALVFTTRYLDLFTNF 55 SECONDARY 23 3 60 NTVMKVVFLLCAYVTVYMIYGK 81 PRIMARY 22 4 90 NDTFRLEFLLVPVIGLSFLENYS 112 SECONDARY 23 5 117 EILWTFSIYLESVAILPQLFMIS 139 SECONDARY 23 6 146 TITTHYLFFLGLYRALYLANWI 167 SECONDARY 22 7 179 IAVVSGVVQTIFYCDFFYLYVTK 201 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006845 212 609024 76.8 98.6 NP_006792 212 131235 73.0 98.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0529 Download

>KIEE0529  642 bp
ATGAACGTGTTCCGAATCCTCGGCGACCTGAGCCACCTCCTGGCCATGATCTTGCTGCTG
GGGAAGATCTGGAGGTCCAAGTGCTGCAAGGGCATCTCTGGGAAGAGCCAGATCCTGTTT
GCTCTCGTCTTCACCACCAGGTACCTGGACCTGTTCACCAACTTCATCTCCATCTACAAC
ACAGTAATGAAGGTGGTTTTTCTCCTCTGTGCCTATGTTACAGTGTACATGATATATGGG
AAATTCCGTAAAACTTTTGACAGTGAGAATGACACATTCCGCCTGGAGTTTCTTCTGGTC
CCAGTCATTGGCCTTTCCTTCCTTGAAAACTACAGTTTCACTCTGCTGGAGATCCTCTGG
ACTTTCTCTATCTATCTGGAATCAGTGGCTATCCTGCCCCAGCTCTTCATGATCAGCAAG
ACTGGAGAGGCTGAGACCATAACTACTCACTACCTGTTCTTTCTGGGTCTGTACCGGGCA
CTCTACCTGGCTAACTGGATCAGGCGGTACCAGACTGAGAATTTCTATGACCAAATTGCA
GTCGTGTCTGGAGTAGTACAAACCATCTTCTACTGTGACTTCTTCTACTTGTATGTGACC
AAAGTCCTTAAGGGAAAGAAGTTAAGTCTTCCAATGCCAATC

ORF Protein

Cloned ORF protein sequence for pF1KE0529 Download

>KIEE0529  214 aa
MNVFRILGDLSHLLAMILLLGKIWRSKCCKGISGKSQILFALVFTTRYLDLFTNFISIYN
TVMKVVFLLCAYVTVYMIYGKFRKTFDSENDTFRLEFLLVPVIGLSFLENYSFTLLEILW
TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLANWIRRYQTENFYDQIA
VVSGVVQTIFYCDFFYLYVTKVLKGKKLSLPMPI

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0529 Download

>pF1KE0529  3755 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAACGTGTTC
CGAATCCTCGGCGACCTGAGCCACCTCCTGGCCATGATCTTGCTGCTGGGGAAGATCTGG
AGGTCCAAGTGCTGCAAGGGCATCTCTGGGAAGAGCCAGATCCTGTTTGCTCTCGTCTTC
ACCACCAGGTACCTGGACCTGTTCACCAACTTCATCTCCATCTACAACACAGTAATGAAG
GTGGTTTTTCTCCTCTGTGCCTATGTTACAGTGTACATGATATATGGGAAATTCCGTAAA
ACTTTTGACAGTGAGAATGACACATTCCGCCTGGAGTTTCTTCTGGTCCCAGTCATTGGC
CTTTCCTTCCTTGAAAACTACAGTTTCACTCTGCTGGAGATCCTCTGGACTTTCTCTATC
TATCTGGAATCAGTGGCTATCCTGCCCCAGCTCTTCATGATCAGCAAGACTGGAGAGGCT
GAGACCATAACTACTCACTACCTGTTCTTTCTGGGTCTGTACCGGGCACTCTACCTGGCT
AACTGGATCAGGCGGTACCAGACTGAGAATTTCTATGACCAAATTGCAGTCGTGTCTGGA
GTAGTACAAACCATCTTCTACTGTGACTTCTTCTACTTGTATGTGACCAAAGTCCTTAAG
GGAAAGAAGTTAAGTCTTCCAATGCCAATCGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC
AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG
GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC
GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT
TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT
TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG
CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT
TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT
TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG
CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA
AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT
TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC
TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT
ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT