SYNJ2BP ORF clone FXC03839

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Flexi ORF Clone FXC03839

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Clone info.

Species

human

Clone Name

pF1KB0931 Sequence (with vector) Restriction Map

Product ID

FXC03839

HaloTag Clone PID

FHC03839

ORF Sequence

DNA sequence (435 bp)
Protein sequence (145 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527912]

Gene

KIBB0931

Symbol

SYNJ2BP

Alias : ARIP2, OMP25

Description

synaptojanin 2 binding protein

Original Clone ID

cs02031

Features of the cloned ORF sequence

Description

Length: 435 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 145 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9803.1 5.9e-53 100.0 SYNJ2BP CCDS73648.1 6.2e-35 93.6 COX16 CCDS56300.1 2.4e-11 42.0 DLG1 CCDS56301.1 2.4e-11 42.0 DLG1 CCDS45600.1 2.6e-11 51.2 DLG4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001478 14 97 PF00595 PDZ/DHR/GLGF HMMSmart IPR001478 21 100 SM00228 PDZ/DHR/GLGF ProfileScan IPR001478 13 100 PS50106 PDZ/DHR/GLGF
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 117 GIPIFMVLVPVFALTMVAAWAF 138 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_060843 145 609411 100.0 100.0 XP_011510811 554 601014 42.0 81.4 NP_001191317 788 601014 42.0 81.4 NP_001191316 800 601014 42.0 81.4 XP_016861312 810 601014 42.0 81.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB0931 Download

>KIBB0931  435 bp
ATGAACGGAAGAGTGGATTATTTGGTCACTGAGGAAGAGATCAATCTTACCAGAGGGCCC
TCAGGGCTGGGCTTCAACATCGTCGGTGGGACAGATCAGCAGTATGTCTCCAACGACAGT
GGCATCTACGTCAGCCGCATCAAAGAAAATGGGGCTGCGGCCCTGGATGGGCGGCTCCAG
GAGGGTGATAAGATCCTTTCGGTAAATGGCCAAGACCTAAAGAACCTGCTGCACCAGGAT
GCTGTAGACCTCTTTCGTAATGCAGGCTATGCTGTGTCTCTGAGAGTGCAGCACAGGTTA
CAGGTGCAGAATGGACCTATAGGACATCGAGGTGAAGGGGACCCAAGTGGTATTCCCATA
TTTATGGTGCTGGTGCCAGTGTTTGCCCTCACCATGGTAGCAGCCTGGGCTTTCATGAGA
TACCGGCAACAACTT

ORF Protein

Cloned ORF protein sequence for pF1KB0931 Download

>KIBB0931  145 aa
MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQ
EGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPIGHRGEGDPSGIPI
FMVLVPVFALTMVAAWAFMRYRQQL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB0931 Download

>pF1KB0931  3548 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAACGGAAGA
GTGGATTATTTGGTCACTGAGGAAGAGATCAATCTTACCAGAGGGCCCTCAGGGCTGGGC
TTCAACATCGTCGGTGGGACAGATCAGCAGTATGTCTCCAACGACAGTGGCATCTACGTC
AGCCGCATCAAAGAAAATGGGGCTGCGGCCCTGGATGGGCGGCTCCAGGAGGGTGATAAG
ATCCTTTCGGTAAATGGCCAAGACCTAAAGAACCTGCTGCACCAGGATGCTGTAGACCTC
TTTCGTAATGCAGGCTATGCTGTGTCTCTGAGAGTGCAGCACAGGTTACAGGTGCAGAAT
GGACCTATAGGACATCGAGGTGAAGGGGACCCAAGTGGTATTCCCATATTTATGGTGCTG
GTGCCAGTGTTTGCCCTCACCATGGTAGCAGCCTGGGCTTTCATGAGATACCGGCAACAA
CTTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT