Result of FASTA (ccds) for pF1KB0931
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB0931, 145 aa
  1>>>pF1KB0931 145 - 145 aa - 145 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1610+/-0.000831; mu= 12.4075+/- 0.050
 mean_var=83.7801+/-16.864, 0's: 0 Z-trim(108.1): 163  B-trim: 49 in 1/49
 Lambda= 0.140121
 statistics sampled from 9807 (10013) to 9807 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.308), width:  16
 Scan time:  1.510

The best scores are:                                      opt bits E(32554)
CCDS9803.1 SYNJ2BP gene_id:55333|Hs108|chr14       ( 145)  958 202.9 5.9e-53
CCDS73648.1 COX16 gene_id:100529257|Hs108|chr14    ( 182)  663 143.3 6.2e-35
CCDS56300.1 DLG1 gene_id:1739|Hs108|chr3           ( 788)  283 67.1 2.4e-11
CCDS56301.1 DLG1 gene_id:1739|Hs108|chr3           ( 800)  283 67.1 2.4e-11
CCDS45600.1 DLG4 gene_id:1742|Hs108|chr17          ( 721)  282 66.8 2.6e-11
CCDS82050.1 DLG4 gene_id:1742|Hs108|chr17          ( 724)  282 66.8 2.6e-11
CCDS75072.1 DLG1 gene_id:1739|Hs108|chr3           ( 892)  283 67.1 2.6e-11
CCDS43194.1 DLG1 gene_id:1739|Hs108|chr3           ( 904)  283 67.1 2.6e-11
CCDS3327.1 DLG1 gene_id:1739|Hs108|chr3            ( 926)  283 67.1 2.7e-11
CCDS45599.1 DLG4 gene_id:1742|Hs108|chr17          ( 767)  282 66.9 2.7e-11
CCDS44691.1 DLG2 gene_id:1740|Hs108|chr11          ( 749)  274 65.2 8.1e-11
CCDS73357.1 DLG2 gene_id:1740|Hs108|chr11          ( 852)  274 65.3 8.9e-11
CCDS41696.1 DLG2 gene_id:1740|Hs108|chr11          ( 870)  274 65.3 9.1e-11
CCDS55782.1 DLG2 gene_id:1740|Hs108|chr11          ( 909)  274 65.3 9.3e-11
CCDS44690.1 DLG2 gene_id:1740|Hs108|chr11          ( 975)  274 65.3 9.8e-11


>>CCDS9803.1 SYNJ2BP gene_id:55333|Hs108|chr14            (145 aa)
 initn: 958 init1: 958 opt: 958  Z-score: 1064.2  bits: 202.9 E(32554): 5.9e-53
Smith-Waterman score: 958; 100.0% identity (100.0% similar) in 145 aa overlap (1-145:1-145)

               10        20        30        40        50        60
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 EGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPIGHRGEGDPSGIPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 EGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPIGHRGEGDPSGIPI
               70        80        90       100       110       120

              130       140     
pF1KB0 FMVLVPVFALTMVAAWAFMRYRQQL
       :::::::::::::::::::::::::
CCDS98 FMVLVPVFALTMVAAWAFMRYRQQL
              130       140     

>>CCDS73648.1 COX16 gene_id:100529257|Hs108|chr14         (182 aa)
 initn: 677 init1: 663 opt: 663  Z-score: 740.6  bits: 143.3 E(32554): 6.2e-35
Smith-Waterman score: 663; 93.6% identity (96.4% similar) in 110 aa overlap (1-110:1-110)

               10        20        30        40        50        60
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 EGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPIGHRGEGDPSGIPI
       :::::::::::::::::::::::::::::::::::::::: . .: .: :          
CCDS73 EGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLLIVGGSFGLREFSQIRYDAV
               70        80        90       100       110       120

              130       140                                        
pF1KB0 FMVLVPVFALTMVAAWAFMRYRQQL                                   
                                                                   
CCDS73 KSKMDPELEKKLKENKISLESEYEKIKDSKFDDWKNIRGPRPWEDPDLLQGRNPESLKTK
              130       140       150       160       170       180

>>CCDS56300.1 DLG1 gene_id:1739|Hs108|chr3                (788 aa)
 initn: 432 init1: 279 opt: 283  Z-score: 317.2  bits: 67.1 E(32554): 2.4e-11
Smith-Waterman score: 283; 42.0% identity (71.4% similar) in 119 aa overlap (1-118:97-213)

                                              10        20         
pF1KB0                               MNGR-VDYLVTEEEINLTRGPSGLGFNIVG
                                     .::  .::    :::.: :: :::::.:.:
CCDS56 IDCISVATSSTQANPPPVLVNTDSLETPTYVNGTDADY--EYEEITLERGNSGLGFSIAG
         70        80        90       100         110       120    

      30        40        50        60        70        80         
pF1KB0 GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG
       :::. ....::.:....:  .:::: ::::. .: :: ::  :.... :. ::. ...::
CCDS56 GTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAG
          130       140       150       160       170       180    

      90       100       110       120       130       140         
pF1KB0 YAVSLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL    
         : : :..:  :..  .  .    :.:.                               
CCDS56 SIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAH
          190       200       210       220       230       240    

>>CCDS56301.1 DLG1 gene_id:1739|Hs108|chr3                (800 aa)
 initn: 432 init1: 279 opt: 283  Z-score: 317.1  bits: 67.1 E(32554): 2.4e-11
Smith-Waterman score: 283; 42.0% identity (71.4% similar) in 119 aa overlap (1-118:97-213)

                                              10        20         
pF1KB0                               MNGR-VDYLVTEEEINLTRGPSGLGFNIVG
                                     .::  .::    :::.: :: :::::.:.:
CCDS56 IDCISVATSSTQANPPPVLVNTDSLETPTYVNGTDADY--EYEEITLERGNSGLGFSIAG
         70        80        90       100         110       120    

      30        40        50        60        70        80         
pF1KB0 GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG
       :::. ....::.:....:  .:::: ::::. .: :: ::  :.... :. ::. ...::
CCDS56 GTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAG
          130       140       150       160       170       180    

      90       100       110       120       130       140         
pF1KB0 YAVSLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL    
         : : :..:  :..  .  .    :.:.                               
CCDS56 SIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAH
          190       200       210       220       230       240    

>>CCDS45600.1 DLG4 gene_id:1742|Hs108|chr17               (721 aa)
 initn: 431 init1: 272 opt: 282  Z-score: 316.6  bits: 66.8 E(32554): 2.6e-11
Smith-Waterman score: 282; 51.2% identity (83.3% similar) in 84 aa overlap (13-96:157-240)

                                 10        20        30        40  
pF1KB0                   MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGI
                                     ::.: .::.::::.:.::. .:.. .:..:
CCDS45 HSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSI
        130       140       150       160       170       180      

             50        60        70        80        90       100  
pF1KB0 YVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQV
       ::..: :.:::  ::::: :::::.::.  :....:.:::  ..:.  .: :.:      
CCDS45 YVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA
        190       200       210       220       230       240      

            110       120       130       140                      
pF1KB0 QNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL                 
                                                                   
CCDS45 YLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPR
        250       260       270       280       290       300      

>>CCDS82050.1 DLG4 gene_id:1742|Hs108|chr17               (724 aa)
 initn: 431 init1: 272 opt: 282  Z-score: 316.6  bits: 66.8 E(32554): 2.6e-11
Smith-Waterman score: 282; 51.2% identity (83.3% similar) in 84 aa overlap (13-96:160-243)

                                 10        20        30        40  
pF1KB0                   MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGI
                                     ::.: .::.::::.:.::. .:.. .:..:
CCDS82 HSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSI
     130       140       150       160       170       180         

             50        60        70        80        90       100  
pF1KB0 YVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQV
       ::..: :.:::  ::::: :::::.::.  :....:.:::  ..:.  .: :.:      
CCDS82 YVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA
     190       200       210       220       230       240         

            110       120       130       140                      
pF1KB0 QNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL                 
                                                                   
CCDS82 YLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPR
     250       260       270       280       290       300         

>>CCDS75072.1 DLG1 gene_id:1739|Hs108|chr3                (892 aa)
 initn: 432 init1: 279 opt: 283  Z-score: 316.5  bits: 67.1 E(32554): 2.6e-11
Smith-Waterman score: 283; 42.0% identity (71.4% similar) in 119 aa overlap (1-118:180-296)

                                              10        20         
pF1KB0                               MNGR-VDYLVTEEEINLTRGPSGLGFNIVG
                                     .::  .::    :::.: :: :::::.:.:
CCDS75 GFVSHSHISPIKANPPPVLVNTDSLETPTYVNGTDADY--EYEEITLERGNSGLGFSIAG
     150       160       170       180         190       200       

      30        40        50        60        70        80         
pF1KB0 GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG
       :::. ....::.:....:  .:::: ::::. .: :: ::  :.... :. ::. ...::
CCDS75 GTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAG
       210       220       230       240       250       260       

      90       100       110       120       130       140         
pF1KB0 YAVSLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL    
         : : :..:  :..  .  .    :.:.                               
CCDS75 SIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAH
       270       280       290       300       310       320       

>>CCDS43194.1 DLG1 gene_id:1739|Hs108|chr3                (904 aa)
 initn: 432 init1: 279 opt: 283  Z-score: 316.4  bits: 67.1 E(32554): 2.6e-11
Smith-Waterman score: 283; 42.0% identity (71.4% similar) in 119 aa overlap (1-118:213-329)

                                              10        20         
pF1KB0                               MNGR-VDYLVTEEEINLTRGPSGLGFNIVG
                                     .::  .::    :::.: :: :::::.:.:
CCDS43 AENTVILPTIPQANPPPVLVNTDSLETPTYVNGTDADY--EYEEITLERGNSGLGFSIAG
            190       200       210       220         230       240

      30        40        50        60        70        80         
pF1KB0 GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG
       :::. ....::.:....:  .:::: ::::. .: :: ::  :.... :. ::. ...::
CCDS43 GTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAG
              250       260       270       280       290       300

      90       100       110       120       130       140         
pF1KB0 YAVSLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL    
         : : :..:  :..  .  .    :.:.                               
CCDS43 SIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAH
              310       320       330       340       350       360

>>CCDS3327.1 DLG1 gene_id:1739|Hs108|chr3                 (926 aa)
 initn: 432 init1: 279 opt: 283  Z-score: 316.3  bits: 67.1 E(32554): 2.7e-11
Smith-Waterman score: 283; 42.0% identity (71.4% similar) in 119 aa overlap (1-118:213-329)

                                              10        20         
pF1KB0                               MNGR-VDYLVTEEEINLTRGPSGLGFNIVG
                                     .::  .::    :::.: :: :::::.:.:
CCDS33 AENTVILPTIPQANPPPVLVNTDSLETPTYVNGTDADY--EYEEITLERGNSGLGFSIAG
            190       200       210       220         230       240

      30        40        50        60        70        80         
pF1KB0 GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG
       :::. ....::.:....:  .:::: ::::. .: :: ::  :.... :. ::. ...::
CCDS33 GTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAG
              250       260       270       280       290       300

      90       100       110       120       130       140         
pF1KB0 YAVSLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL    
         : : :..:  :..  .  .    :.:.                               
CCDS33 SIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAH
              310       320       330       340       350       360

>>CCDS45599.1 DLG4 gene_id:1742|Hs108|chr17               (767 aa)
 initn: 431 init1: 272 opt: 282  Z-score: 316.3  bits: 66.9 E(32554): 2.7e-11
Smith-Waterman score: 282; 51.2% identity (83.3% similar) in 84 aa overlap (13-96:203-286)

                                 10        20        30        40  
pF1KB0                   MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGI
                                     ::.: .::.::::.:.::. .:.. .:..:
CCDS45 HSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSI
            180       190       200       210       220       230  

             50        60        70        80        90       100  
pF1KB0 YVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQV
       ::..: :.:::  ::::: :::::.::.  :....:.:::  ..:.  .: :.:      
CCDS45 YVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA
            240       250       260       270       280       290  

            110       120       130       140                      
pF1KB0 QNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL                 
                                                                   
CCDS45 YLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPR
            300       310       320       330       340       350  




145 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 17:19:11 2016 done: Sat Nov  5 17:19:12 2016
 Total Scan time:  1.510 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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