PKNOX2 ORF clone FXC02728

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC02728

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Clone info.

Species

human

Clone Name

pF1KB8291 Sequence (with vector) Restriction Map

Product ID

FXC02728

HaloTag Clone PID

FHC02728

Original Clone PID

ORK02728

ORF Sequence

DNA sequence (1416 bp)
Protein sequence (472 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464002]

Gene

KIBB8291

Symbol

PKNOX2

Alias : PREP2

Description

PBX/knotted 1 homeobox 2

Original Clone ID

cp00651

Features of the cloned ORF sequence

Description

Length: 1416 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 472 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS41730.1 8.2e-124 100.0 PKNOX2 CCDS68211.1 7.9e-34 58.5 PKNOX1 CCDS13692.1 3.1e-27 58.1 PKNOX1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001356 298 345 PF00046 Homeobox HMMSmart IPR001356 288 353 SM00389 Homeobox ProfileScan IPR001356 286 349 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_071345 472 613066 100.0 100.0 XP_011541247 472 613066 100.0 100.0 XP_011541246 472 613066 100.0 100.0 XP_005271699 472 613066 100.0 100.0 XP_016873599 472 613066 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8291 Download

>KIBB8291  1416 bp
ATGATGCAACATGCCTCCCCAGCCCCCGCTCTGACGATGATGGCCACGCAGAATGTCCCG
CCCCCACCCTACCAGGACAGCCCACAGATGACGGCAACCGCCCAGCCACCCTCCAAGGCC
CAGGCTGTCCACATCTCTGCCCCCTCAGCTGCTGCCAGCACACCTGTGCCCAGTGCCCCC
ATCGACCCCCAGGCCCAGCTGGAGGCTGACAAGCGAGCTGTATACAGGCACCCTCTTTTC
CCGCTCCTGACGCTGCTGTTTGAGAAATGTGAACAGGCCACCCAGGGCTCTGAGTGCATC
ACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCAC
AAACCCTTCTTCAGCGATGACCCAGAACTGGACAATCTGATGGTGAAGGCAATCCAGGTC
CTGAGAATCCACCTGCTGGAGCTGGAGAAAGTCAATGAACTCTGCAAGGACTTTTGTAAC
CGTTACATCACCTGCCTCAAAACCAAGATGCACAGCGACAACCTGCTCAGGAATGATCTA
GGGGGGCCCTACTCCCCCAACCAGCCCTCCATCAACCTTCACTCACAGGACCTCCTGCAG
AATTCCCCCAATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCC
TCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGT
GGAGCCTTATACCAACCGGTTACCATGGTAACCTCCCAGGGTCAGGTGGTCACCCAAGCA
ATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGACCTCACCTCCCTC
CTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCCCAAGCATGCCACC
AATATAATGCGTTCTTGGCTCTTCCAGCATCTCATGCACCCCTACCCCACGGAGGATGAG
AAGAGGCAGATCGCAGCCCAGACCAACCTCACCCTCCTGCAAGTAAACAACTGGTTCATC
AATGCCCGGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCCCC
AAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATC
GCTGCGGGGGTGCTGCAGCAGCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATC
AACTTGGACAACCTGCAGTCCCTGTCCTCAGACAGTGCCACCATGGCCATGCAGCAGGCT
ATGATGGCTGCACACGATGACTCATTGGATGGGACAGAAGAAGAGGATGAGGATGAGATG
GAAGAGGAGGAGGAGGAGGAGCTGGAGGAGGAGGTCGACGAGCTGCAGACGACAAATGTC
AGCGACCTGGGCTTGGAACACAGTGACTCCCTGGAG

ORF Protein

Cloned ORF protein sequence for pF1KB8291 Download

>KIBB8291  472 aa
MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8291 Download

>pF1KB8291  4529 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATGCAACAT
GCCTCCCCAGCCCCCGCTCTGACGATGATGGCCACGCAGAATGTCCCGCCCCCACCCTAC
CAGGACAGCCCACAGATGACGGCAACCGCCCAGCCACCCTCCAAGGCCCAGGCTGTCCAC
ATCTCTGCCCCCTCAGCTGCTGCCAGCACACCTGTGCCCAGTGCCCCCATCGACCCCCAG
GCCCAGCTGGAGGCTGACAAGCGAGCTGTATACAGGCACCCTCTTTTCCCGCTCCTGACG
CTGCTGTTTGAGAAATGTGAACAGGCCACCCAGGGCTCTGAGTGCATCACCTCCGCCAGC
TTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTC
AGCGATGACCCAGAACTGGACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGAATCCAC
CTGCTGGAGCTGGAGAAAGTCAATGAACTCTGCAAGGACTTTTGTAACCGTTACATCACC
TGCCTCAAAACCAAGATGCACAGCGACAACCTGCTCAGGAATGATCTAGGGGGGCCCTAC
TCCCCCAACCAGCCCTCCATCAACCTTCACTCACAGGACCTCCTGCAGAATTCCCCCAAT
TCCATGTCCGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCCTCAGCGCTCCAG
CAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGTGGAGCCTTATAC
CAACCGGTTACCATGGTAACCTCCCAGGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGA
GCCATCCAGATCCAGAACACACAGGTTAACCTTGACCTCACCTCCCTCCTGGACAATGAG
GATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCCCAAGCATGCCACCAATATAATGCGT
TCTTGGCTCTTCCAGCATCTCATGCACCCCTACCCCACGGAGGATGAGAAGAGGCAGATC
GCAGCCCAGACCAACCTCACCCTCCTGCAAGTAAACAACTGGTTCATCAATGCCCGGAGG
CGCATCCTGCAGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCCCCAAAGCCAAGAAG
ATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTG
CTGCAGCAGCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAAC
CTGCAGTCCCTGTCCTCAGACAGTGCCACCATGGCCATGCAGCAGGCTATGATGGCTGCA
CACGATGACTCATTGGATGGGACAGAAGAAGAGGATGAGGATGAGATGGAAGAGGAGGAG
GAGGAGGAGCTGGAGGAGGAGGTCGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGC
TTGGAACACAGTGACTCCCTGGAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGC
GGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGG
CCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCG
CCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGG
ACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGAC
CCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA
TAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGT
GCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTC
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAG
AGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACAC
TAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGT
TGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAA
GCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGG
GTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAA
AAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT